Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 AC244100.4-201ENST00000617747 388 ntBASIC4.91□□□□□ -1.62
CX3CL1P78423 AC048341.3-201ENST00000619323 491 ntBASIC4.91□□□□□ -1.62
CX3CL1P78423 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC4.91□□□□□ -1.62
CX3CL1P78423 AC141930.3-201ENST00000640435 762 ntTSL 5 BASIC4.91□□□□□ -1.62
CX3CL1P78423 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
CX3CL1P78423 AC024651.2-201ENST00000562480 2098 ntBASIC4.91□□□□□ -1.62
CX3CL1P78423 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
CX3CL1P78423 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
CX3CL1P78423 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC4.91□□□□□ -1.62
CX3CL1P78423 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
CX3CL1P78423 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC4.91□□□□□ -1.62
CX3CL1P78423 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
CX3CL1P78423 AL592494.2-201ENST00000425455 1548 ntBASIC4.91□□□□□ -1.62
CX3CL1P78423 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CX3CL1P78423 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC4.91□□□□□ -1.62
CX3CL1P78423 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
CX3CL1P78423 ZFP62-201ENST00000502412 3415 ntAPPRIS P1 TSL 2 BASIC4.91□□□□□ -1.62
CX3CL1P78423 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC4.91□□□□□ -1.62
CX3CL1P78423 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC4.91□□□□□ -1.62
CX3CL1P78423 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
CX3CL1P78423 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
CX3CL1P78423 AC132825.1-201ENST00000463573 2247 ntBASIC4.91□□□□□ -1.62
CX3CL1P78423 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CX3CL1P78423 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC4.9□□□□□ -1.62
CX3CL1P78423 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.62
CX3CL1P78423 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.62
CX3CL1P78423 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
CX3CL1P78423 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.62
CX3CL1P78423 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC4.9□□□□□ -1.62
CX3CL1P78423 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC4.9□□□□□ -1.62
CX3CL1P78423 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC4.9□□□□□ -1.62
CX3CL1P78423 AL355488.2-201ENST00000609909 2850 ntBASIC4.9□□□□□ -1.62
CX3CL1P78423 CLC-201ENST00000221804 635 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
CX3CL1P78423 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
CX3CL1P78423 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
CX3CL1P78423 RBBP4P5-201ENST00000398583 1266 ntBASIC4.9□□□□□ -1.63
CX3CL1P78423 AL034403.1-201ENST00000399414 885 ntBASIC4.9□□□□□ -1.63
CX3CL1P78423 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC4.9□□□□□ -1.63
CX3CL1P78423 RN7SKP151-201ENST00000410230 316 ntBASIC4.9□□□□□ -1.63
CX3CL1P78423 RPL26P37-201ENST00000411983 438 ntBASIC4.9□□□□□ -1.63
CX3CL1P78423 AL354868.1-201ENST00000417077 482 ntBASIC4.9□□□□□ -1.63
CX3CL1P78423 BTF3P9-201ENST00000418784 283 ntBASIC4.9□□□□□ -1.63
CX3CL1P78423 AC234781.4-201ENST00000419384 244 ntBASIC4.9□□□□□ -1.63
CX3CL1P78423 MARK2P12-201ENST00000420129 585 ntBASIC4.9□□□□□ -1.63
CX3CL1P78423 AC074035.1-201ENST00000420725 1184 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
CX3CL1P78423 AC006065.1-201ENST00000422539 802 ntBASIC4.9□□□□□ -1.63
CX3CL1P78423 SETP9-201ENST00000423837 832 ntBASIC4.9□□□□□ -1.63
CX3CL1P78423 AL139158.1-201ENST00000424719 340 ntBASIC4.9□□□□□ -1.63
CX3CL1P78423 GAPDHP75-201ENST00000433910 943 ntBASIC4.9□□□□□ -1.63
CX3CL1P78423 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC4.9□□□□□ -1.63
CX3CL1P78423 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC4.9□□□□□ -1.63
CX3CL1P78423 HCG14-201ENST00000444986 413 ntTSL 2 BASIC4.9□□□□□ -1.63
CX3CL1P78423 SEPHS1P4-201ENST00000446112 1176 ntBASIC4.9□□□□□ -1.63
CX3CL1P78423 AP002856.1-201ENST00000447864 562 ntTSL 4 BASIC4.9□□□□□ -1.63
CX3CL1P78423 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC4.9□□□□□ -1.63
CX3CL1P78423 AC078857.1-201ENST00000469870 667 ntBASIC4.9□□□□□ -1.63
CX3CL1P78423 OR7E22P-201ENST00000478335 1035 ntBASIC4.9□□□□□ -1.63
CX3CL1P78423 PFN2-209ENST00000481275 560 ntTSL 4 BASIC4.9□□□□□ -1.63
CX3CL1P78423 RPL12P30-201ENST00000488389 499 ntBASIC4.9□□□□□ -1.63
CX3CL1P78423 RN7SL362P-201ENST00000494228 267 ntBASIC4.9□□□□□ -1.63
CX3CL1P78423 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC4.9□□□□□ -1.63
CX3CL1P78423 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC4.9□□□□□ -1.63
CX3CL1P78423 AC090958.1-201ENST00000511122 351 ntBASIC4.9□□□□□ -1.63
CX3CL1P78423 AC108103.1-201ENST00000511286 446 ntBASIC4.9□□□□□ -1.63
CX3CL1P78423 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
CX3CL1P78423 AC097486.1-201ENST00000515331 210 ntBASIC4.9□□□□□ -1.63
CX3CL1P78423 AC008429.4-201ENST00000521201 182 ntBASIC4.9□□□□□ -1.63
CX3CL1P78423 OR6M2P-201ENST00000529831 871 ntBASIC4.9□□□□□ -1.63
CX3CL1P78423 AC036111.2-201ENST00000533247 901 ntBASIC4.9□□□□□ -1.63
CX3CL1P78423 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
CX3CL1P78423 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC4.9□□□□□ -1.63
CX3CL1P78423 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC4.9□□□□□ -1.63
CX3CL1P78423 AC015911.5-201ENST00000587076 451 ntBASIC4.9□□□□□ -1.63
CX3CL1P78423 GLYATL1P2-202ENST00000588046 902 ntBASIC4.9□□□□□ -1.63
CX3CL1P78423 ZNF235-204ENST00000589799 955 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
CX3CL1P78423 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC4.9□□□□□ -1.63
CX3CL1P78423 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC4.9□□□□□ -1.63
CX3CL1P78423 AP000654.1-201ENST00000602510 1192 ntTSL 5 BASIC4.9□□□□□ -1.63
CX3CL1P78423 AC144521.1-201ENST00000607148 956 ntBASIC4.9□□□□□ -1.63
CX3CL1P78423 AC005828.7-201ENST00000607331 556 ntBASIC4.9□□□□□ -1.63
CX3CL1P78423 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC4.9□□□□□ -1.63
CX3CL1P78423 AL137067.2-201ENST00000621202 131 ntBASIC4.9□□□□□ -1.63
CX3CL1P78423 AC097460.3-201ENST00000623099 442 ntBASIC4.9□□□□□ -1.63
CX3CL1P78423 OXSM-209ENST00000626005 309 ntTSL 3 BASIC4.9□□□□□ -1.63
CX3CL1P78423 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC4.9□□□□□ -1.63
CX3CL1P78423 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC4.9□□□□□ -1.63
CX3CL1P78423 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC4.9□□□□□ -1.63
CX3CL1P78423 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
CX3CL1P78423 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC4.9□□□□□ -1.63
CX3CL1P78423 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
CX3CL1P78423 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
CX3CL1P78423 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.63
CX3CL1P78423 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
CX3CL1P78423 EIF3EP1-201ENST00000433978 1316 ntBASIC4.9□□□□□ -1.63
CX3CL1P78423 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
CX3CL1P78423 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.63
CX3CL1P78423 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.63
CX3CL1P78423 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
CX3CL1P78423 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
CX3CL1P78423 DYNC2LI1-201ENST00000260605 1399 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 453.8 ms