Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 AL049767.1-201ENST00000636811 514 ntTSL 5 BASIC4.07□□□□□ -1.76
CKS1BP61024 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
CKS1BP61024 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
CKS1BP61024 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.07□□□□□ -1.76
CKS1BP61024 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC4.07□□□□□ -1.76
CKS1BP61024 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CKS1BP61024 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CKS1BP61024 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CKS1BP61024 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC4.07□□□□□ -1.76
CKS1BP61024 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CKS1BP61024 MIPEPP2-201ENST00000422560 1819 ntBASIC4.07□□□□□ -1.76
CKS1BP61024 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.07□□□□□ -1.76
CKS1BP61024 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
CKS1BP61024 AC112255.1-201ENST00000624070 2493 ntBASIC4.06□□□□□ -1.76
CKS1BP61024 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.06□□□□□ -1.76
CKS1BP61024 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CKS1BP61024 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CKS1BP61024 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CKS1BP61024 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CKS1BP61024 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC4.06□□□□□ -1.76
CKS1BP61024 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CKS1BP61024 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC4.06□□□□□ -1.76
CKS1BP61024 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC4.06□□□□□ -1.76
CKS1BP61024 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CKS1BP61024 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CKS1BP61024 AC010894.1-201ENST00000313760 361 ntBASIC4.06□□□□□ -1.76
CKS1BP61024 OR56A4-201ENST00000330728 1209 ntBASIC4.06□□□□□ -1.76
CKS1BP61024 RNU1-5P-201ENST00000362684 144 ntBASIC4.06□□□□□ -1.76
CKS1BP61024 RN7SKP185-201ENST00000362813 326 ntBASIC4.06□□□□□ -1.76
CKS1BP61024 RNU1-49P-201ENST00000363468 159 ntBASIC4.06□□□□□ -1.76
CKS1BP61024 XAGE3-202ENST00000375491 489 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CKS1BP61024 IL6-203ENST00000401651 539 ntTSL 2 BASIC4.06□□□□□ -1.76
CKS1BP61024 AC010082.1-201ENST00000411797 546 ntTSL 2 BASIC4.06□□□□□ -1.76
CKS1BP61024 AL139135.1-201ENST00000412675 209 ntBASIC4.06□□□□□ -1.76
CKS1BP61024 METTL15P3-201ENST00000415522 1221 ntBASIC4.06□□□□□ -1.76
CKS1BP61024 PPIAP23-201ENST00000420099 497 ntBASIC4.06□□□□□ -1.76
CKS1BP61024 AC114498.1-201ENST00000423796 607 ntTSL 5 BASIC4.06□□□□□ -1.76
CKS1BP61024 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC4.06□□□□□ -1.76
CKS1BP61024 AL354707.3-201ENST00000427308 331 ntBASIC4.06□□□□□ -1.76
CKS1BP61024 GTF3AP6-201ENST00000432585 986 ntBASIC4.06□□□□□ -1.76
CKS1BP61024 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC4.06□□□□□ -1.76
CKS1BP61024 SOCS5P1-201ENST00000440415 949 ntBASIC4.06□□□□□ -1.76
CKS1BP61024 RBMY2TP-201ENST00000451162 947 ntBASIC4.06□□□□□ -1.76
CKS1BP61024 AC092675.1-203ENST00000454230 538 ntTSL 5 BASIC4.06□□□□□ -1.76
CKS1BP61024 ACA64.4-201ENST00000459070 127 ntBASIC4.06□□□□□ -1.76
CKS1BP61024 AC104849.1-201ENST00000462623 405 ntBASIC4.06□□□□□ -1.76
CKS1BP61024 RPL5P30-201ENST00000465511 891 ntBASIC4.06□□□□□ -1.76
CKS1BP61024 RPS3AP49-201ENST00000472161 790 ntBASIC4.06□□□□□ -1.76
CKS1BP61024 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC4.06□□□□□ -1.76
CKS1BP61024 RN7SL809P-201ENST00000482040 297 ntBASIC4.06□□□□□ -1.76
CKS1BP61024 RN7SL350P-201ENST00000492591 299 ntBASIC4.06□□□□□ -1.76
CKS1BP61024 RAB7A-208ENST00000493186 329 ntTSL 5 BASIC4.06□□□□□ -1.76
CKS1BP61024 MTCYBP19-201ENST00000517463 1124 ntBASIC4.06□□□□□ -1.76
CKS1BP61024 AC018442.3-201ENST00000523025 183 ntBASIC4.06□□□□□ -1.76
CKS1BP61024 OR56A7P-201ENST00000524865 941 ntBASIC4.06□□□□□ -1.76
CKS1BP61024 PSMC1P8-201ENST00000536820 1296 ntBASIC4.06□□□□□ -1.76
CKS1BP61024 AC125612.1-201ENST00000547580 377 ntBASIC4.06□□□□□ -1.76
CKS1BP61024 UBE2N-204ENST00000549833 960 ntTSL 3 BASIC4.06□□□□□ -1.76
CKS1BP61024 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC4.06□□□□□ -1.76
CKS1BP61024 AC078778.2-201ENST00000553061 567 ntTSL 5 BASIC4.06□□□□□ -1.76
CKS1BP61024 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
CKS1BP61024 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.06□□□□□ -1.76
CKS1BP61024 AC007346.2-201ENST00000564816 892 ntBASIC4.06□□□□□ -1.76
CKS1BP61024 AC126323.5-201ENST00000569913 592 ntTSL 3 BASIC4.06□□□□□ -1.76
CKS1BP61024 AC068408.1-201ENST00000577406 1144 ntBASIC4.06□□□□□ -1.76
CKS1BP61024 AC127024.5-201ENST00000580085 462 ntBASIC4.06□□□□□ -1.76
CKS1BP61024 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC4.06□□□□□ -1.76
CKS1BP61024 AC019131.1-201ENST00000583654 622 ntTSL 5 BASIC4.06□□□□□ -1.76
CKS1BP61024 RPL29P33-201ENST00000587474 316 ntBASIC4.06□□□□□ -1.76
CKS1BP61024 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC4.06□□□□□ -1.76
CKS1BP61024 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC4.06□□□□□ -1.76
CKS1BP61024 AC099777.1-201ENST00000603779 1070 ntBASIC4.06□□□□□ -1.76
CKS1BP61024 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
CKS1BP61024 BRCC3-209ENST00000620502 882 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
CKS1BP61024 AP003108.4-201ENST00000623917 878 ntBASIC4.06□□□□□ -1.76
CKS1BP61024 VIPR1-AS1-221ENST00000626992 602 ntTSL 5 BASIC4.06□□□□□ -1.76
CKS1BP61024 SCRN1-210ENST00000631335 423 ntTSL 5 BASIC4.06□□□□□ -1.76
CKS1BP61024 OR56A4-203ENST00000641279 1209 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
CKS1BP61024 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CKS1BP61024 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CKS1BP61024 B3GNT5-206ENST00000465010 1766 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CKS1BP61024 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC4.06□□□□□ -1.76
CKS1BP61024 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CKS1BP61024 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC4.06□□□□□ -1.76
CKS1BP61024 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CKS1BP61024 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.05□□□□□ -1.76
CKS1BP61024 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
CKS1BP61024 AC126323.6-202ENST00000568092 3511 ntBASIC4.05□□□□□ -1.76
CKS1BP61024 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC4.05□□□□□ -1.76
CKS1BP61024 SMG1P6-201ENST00000532337 2930 ntBASIC4.05□□□□□ -1.76
CKS1BP61024 TLK1P1-201ENST00000456760 2440 ntBASIC4.05□□□□□ -1.76
CKS1BP61024 ADAM5-202ENST00000399789 1942 ntBASIC4.05□□□□□ -1.76
CKS1BP61024 LZIC-203ENST00000400903 1405 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CKS1BP61024 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CKS1BP61024 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
CKS1BP61024 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC4.05□□□□□ -1.76
CKS1BP61024 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CKS1BP61024 AC124312.1-201ENST00000551312 1325 ntAPPRIS P5 TSL 5 BASIC4.05□□□□□ -1.76
CKS1BP61024 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.05□□□□□ -1.76
CKS1BP61024 SPP2-201ENST00000168148 1024 ntAPPRIS P2 TSL 1 (best) BASIC4.05□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 72 ms