Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 AC103563.5-201ENST00000455643 364 ntBASIC5.56□□□□□ -1.52
CLDN6P56747 RN7SL172P-201ENST00000460535 303 ntBASIC5.56□□□□□ -1.52
CLDN6P56747 AL355032.1-201ENST00000472981 438 ntBASIC5.56□□□□□ -1.52
CLDN6P56747 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC5.56□□□□□ -1.52
CLDN6P56747 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC5.56□□□□□ -1.52
CLDN6P56747 CDC42P3-201ENST00000518493 633 ntBASIC5.56□□□□□ -1.52
CLDN6P56747 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC5.56□□□□□ -1.52
CLDN6P56747 MIR3691-201ENST00000578066 90 ntBASIC5.56□□□□□ -1.52
CLDN6P56747 AC104984.1-201ENST00000581633 697 ntTSL 3 BASIC5.56□□□□□ -1.52
CLDN6P56747 AC010245.2-201ENST00000606908 1167 ntBASIC5.56□□□□□ -1.52
CLDN6P56747 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CLDN6P56747 CCL14-204ENST00000622526 472 ntTSL 3 BASIC5.56□□□□□ -1.52
CLDN6P56747 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC5.56□□□□□ -1.52
CLDN6P56747 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC5.56□□□□□ -1.52
CLDN6P56747 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CLDN6P56747 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC5.56□□□□□ -1.52
CLDN6P56747 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC5.56□□□□□ -1.52
CLDN6P56747 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CLDN6P56747 ADGRE1-202ENST00000312053 3128 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
CLDN6P56747 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC5.56□□□□□ -1.52
CLDN6P56747 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CLDN6P56747 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CLDN6P56747 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC5.56□□□□□ -1.52
CLDN6P56747 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CLDN6P56747 AOX3P-204ENST00000491025 2107 ntBASIC5.56□□□□□ -1.52
CLDN6P56747 AC006600.2-201ENST00000624834 2506 ntBASIC5.55□□□□□ -1.52
CLDN6P56747 AC027279.1-201ENST00000568885 4284 ntBASIC5.55□□□□□ -1.52
CLDN6P56747 PSMB2-202ENST00000621781 4217 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CLDN6P56747 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CLDN6P56747 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CLDN6P56747 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC5.55□□□□□ -1.52
CLDN6P56747 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC5.55□□□□□ -1.52
CLDN6P56747 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CLDN6P56747 AL449283.1-201ENST00000602631 3403 ntBASIC5.55□□□□□ -1.52
CLDN6P56747 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CLDN6P56747 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC5.55□□□□□ -1.52
CLDN6P56747 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
CLDN6P56747 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
CLDN6P56747 HMGA1P8-201ENST00000414130 321 ntBASIC5.55□□□□□ -1.52
CLDN6P56747 RPL23AP27-201ENST00000415161 451 ntBASIC5.55□□□□□ -1.52
CLDN6P56747 PTCD2P2-201ENST00000415579 1095 ntBASIC5.55□□□□□ -1.52
CLDN6P56747 AK3P5-201ENST00000432033 519 ntBASIC5.55□□□□□ -1.52
CLDN6P56747 CYCSP12-201ENST00000437729 300 ntBASIC5.55□□□□□ -1.52
CLDN6P56747 AC023141.8-201ENST00000442554 208 ntBASIC5.55□□□□□ -1.52
CLDN6P56747 OR7E116P-201ENST00000448529 957 ntBASIC5.55□□□□□ -1.52
CLDN6P56747 RPL7P61-201ENST00000451721 751 ntBASIC5.55□□□□□ -1.52
CLDN6P56747 ACA64.4-201ENST00000459070 127 ntBASIC5.55□□□□□ -1.52
CLDN6P56747 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC5.55□□□□□ -1.52
CLDN6P56747 RPL5P12-201ENST00000477071 851 ntBASIC5.55□□□□□ -1.52
CLDN6P56747 AC108941.2-201ENST00000506796 716 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
CLDN6P56747 PGAM1P13-201ENST00000507497 754 ntBASIC5.55□□□□□ -1.52
CLDN6P56747 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC5.55□□□□□ -1.52
CLDN6P56747 RN7SKP67-201ENST00000515905 235 ntBASIC5.55□□□□□ -1.52
CLDN6P56747 RNU6-964P-201ENST00000516524 69 ntBASIC5.55□□□□□ -1.52
CLDN6P56747 AC021678.3-201ENST00000517893 476 ntBASIC5.55□□□□□ -1.52
CLDN6P56747 SUMO2P19-201ENST00000518920 295 ntBASIC5.55□□□□□ -1.52
CLDN6P56747 HIGD1AP5-201ENST00000529959 259 ntBASIC5.55□□□□□ -1.52
CLDN6P56747 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC5.55□□□□□ -1.52
CLDN6P56747 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC5.55□□□□□ -1.52
CLDN6P56747 OR4H6P-201ENST00000563771 921 ntBASIC5.55□□□□□ -1.52
CLDN6P56747 MRPS21P7-201ENST00000566937 238 ntBASIC5.55□□□□□ -1.52
CLDN6P56747 RBM22P12-201ENST00000567098 1255 ntBASIC5.55□□□□□ -1.52
CLDN6P56747 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC5.55□□□□□ -1.52
CLDN6P56747 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC5.55□□□□□ -1.52
CLDN6P56747 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC5.55□□□□□ -1.52
CLDN6P56747 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC5.55□□□□□ -1.52
CLDN6P56747 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CLDN6P56747 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CLDN6P56747 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC5.55□□□□□ -1.52
CLDN6P56747 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
CLDN6P56747 AL162456.1-201ENST00000634535 2006 ntBASIC5.55□□□□□ -1.52
CLDN6P56747 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC5.55□□□□□ -1.52
CLDN6P56747 AC018809.2-201ENST00000602436 3823 ntBASIC5.55□□□□□ -1.52
CLDN6P56747 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC5.55□□□□□ -1.52
CLDN6P56747 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC5.55□□□□□ -1.52
CLDN6P56747 AC016907.2-203ENST00000455424 3563 ntTSL 3 BASIC5.55□□□□□ -1.52
CLDN6P56747 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
CLDN6P56747 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
CLDN6P56747 KCNAB1-212ENST00000490337 3122 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CLDN6P56747 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CLDN6P56747 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CLDN6P56747 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
CLDN6P56747 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
CLDN6P56747 SPAG6-209ENST00000538630 2376 ntTSL 5 BASIC5.54□□□□□ -1.52
CLDN6P56747 RPL23P2-201ENST00000320371 421 ntBASIC5.54□□□□□ -1.52
CLDN6P56747 RNA5SP211-201ENST00000365516 117 ntBASIC5.54□□□□□ -1.52
CLDN6P56747 MIR223-201ENST00000385204 110 ntBASIC5.54□□□□□ -1.52
CLDN6P56747 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
CLDN6P56747 SEPT7P2-202ENST00000398921 823 ntBASIC5.54□□□□□ -1.52
CLDN6P56747 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC5.54□□□□□ -1.52
CLDN6P56747 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC5.54□□□□□ -1.52
CLDN6P56747 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC5.54□□□□□ -1.52
CLDN6P56747 CYCSP6-201ENST00000434498 302 ntBASIC5.54□□□□□ -1.52
CLDN6P56747 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC5.54□□□□□ -1.52
CLDN6P56747 AC084149.2-201ENST00000438443 797 ntTSL 5 BASIC5.54□□□□□ -1.52
CLDN6P56747 AL663074.2-201ENST00000440621 479 ntBASIC5.54□□□□□ -1.52
CLDN6P56747 AC245047.2-201ENST00000441060 530 ntBASIC5.54□□□□□ -1.52
CLDN6P56747 AC019185.1-201ENST00000442718 389 ntBASIC5.54□□□□□ -1.52
CLDN6P56747 CUBNP2-201ENST00000443534 1139 ntBASIC5.54□□□□□ -1.52
CLDN6P56747 FAR2P1-206ENST00000449736 709 ntBASIC5.54□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 71.8 ms