Protein–RNA interactions for Protein: P56524

HDAC4, Histone deacetylase 4, humanhuman

Predictions only

Length 1,084 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4P56524 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC6.21□□□□□ -1.42
HDAC4P56524 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
HDAC4P56524 MIR6071-201ENST00000616741 78 ntBASIC6.21□□□□□ -1.42
HDAC4P56524 AP001962.1-201ENST00000624114 559 ntBASIC6.21□□□□□ -1.42
HDAC4P56524 MVP-219ENST00000629059 120 ntTSL 5 BASIC6.21□□□□□ -1.42
HDAC4P56524 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
HDAC4P56524 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
HDAC4P56524 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
HDAC4P56524 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
HDAC4P56524 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
HDAC4P56524 AL161756.3-201ENST00000641216 2071 ntBASIC6.21□□□□□ -1.42
HDAC4P56524 NAMPTP1-201ENST00000440465 2514 ntBASIC6.21□□□□□ -1.42
HDAC4P56524 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.42
HDAC4P56524 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
HDAC4P56524 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC6.2□□□□□ -1.42
HDAC4P56524 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC6.2□□□□□ -1.42
HDAC4P56524 AC005224.3-201ENST00000584683 2140 ntBASIC6.2□□□□□ -1.42
HDAC4P56524 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
HDAC4P56524 CLEC12A-201ENST00000304361 1549 ntAPPRIS P4 TSL 1 (best) BASIC6.2□□□□□ -1.42
HDAC4P56524 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
HDAC4P56524 NLN-202ENST00000502464 8354 ntTSL 5 BASIC6.2□□□□□ -1.42
HDAC4P56524 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
HDAC4P56524 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
HDAC4P56524 RNFT1P3-201ENST00000340898 1052 ntBASIC6.2□□□□□ -1.42
HDAC4P56524 SNORD1C-201ENST00000363315 78 ntBASIC6.2□□□□□ -1.42
HDAC4P56524 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC6.2□□□□□ -1.42
HDAC4P56524 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC6.2□□□□□ -1.42
HDAC4P56524 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC6.2□□□□□ -1.42
HDAC4P56524 AL445928.1-201ENST00000435545 222 ntBASIC6.2□□□□□ -1.42
HDAC4P56524 AMYP1-201ENST00000440059 1023 ntBASIC6.2□□□□□ -1.42
HDAC4P56524 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
HDAC4P56524 AC005077.1-201ENST00000449226 375 ntBASIC6.2□□□□□ -1.42
HDAC4P56524 NPM1P19-201ENST00000450070 712 ntBASIC6.2□□□□□ -1.42
HDAC4P56524 Z83838.1-202ENST00000456225 839 ntBASIC6.2□□□□□ -1.42
HDAC4P56524 AC023194.2-201ENST00000465398 406 ntBASIC6.2□□□□□ -1.42
HDAC4P56524 AC090602.1-201ENST00000469695 252 ntBASIC6.2□□□□□ -1.42
HDAC4P56524 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC6.2□□□□□ -1.42
HDAC4P56524 AC098847.1-201ENST00000473094 348 ntBASIC6.2□□□□□ -1.42
HDAC4P56524 RPL12P24-201ENST00000474907 486 ntBASIC6.2□□□□□ -1.42
HDAC4P56524 AC092865.4-201ENST00000477936 615 ntBASIC6.2□□□□□ -1.42
HDAC4P56524 RPL38P3-201ENST00000484463 213 ntBASIC6.2□□□□□ -1.42
HDAC4P56524 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC6.2□□□□□ -1.42
HDAC4P56524 RNA5SP340-201ENST00000517132 107 ntBASIC6.2□□□□□ -1.42
HDAC4P56524 AC011853.1-201ENST00000518911 454 ntBASIC6.2□□□□□ -1.42
HDAC4P56524 AC005363.1-201ENST00000530779 351 ntBASIC6.2□□□□□ -1.42
HDAC4P56524 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC6.2□□□□□ -1.42
HDAC4P56524 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC6.2□□□□□ -1.42
HDAC4P56524 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
HDAC4P56524 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC6.2□□□□□ -1.42
HDAC4P56524 AL355075.2-201ENST00000555435 478 ntTSL 2 BASIC6.2□□□□□ -1.42
HDAC4P56524 RPA2P1-201ENST00000556557 721 ntBASIC6.2□□□□□ -1.42
HDAC4P56524 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC6.2□□□□□ -1.42
HDAC4P56524 AC008507.3-201ENST00000585753 472 ntBASIC6.2□□□□□ -1.42
HDAC4P56524 AC090227.1-201ENST00000590532 936 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
HDAC4P56524 AC022387.2-201ENST00000604050 448 ntBASIC6.2□□□□□ -1.42
HDAC4P56524 AC244131.2-201ENST00000612592 512 ntTSL 3 BASIC6.2□□□□□ -1.42
HDAC4P56524 AL021918.2-201ENST00000613415 194 ntBASIC6.2□□□□□ -1.42
HDAC4P56524 AP001052.1-201ENST00000626421 99 ntBASIC6.2□□□□□ -1.42
HDAC4P56524 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
HDAC4P56524 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC6.2□□□□□ -1.42
HDAC4P56524 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC6.2□□□□□ -1.42
HDAC4P56524 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
HDAC4P56524 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
HDAC4P56524 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
HDAC4P56524 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
HDAC4P56524 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC6.2□□□□□ -1.42
HDAC4P56524 QRSL1P1-201ENST00000400977 1540 ntBASIC6.2□□□□□ -1.42
HDAC4P56524 LYARP1-201ENST00000436977 1501 ntBASIC6.2□□□□□ -1.42
HDAC4P56524 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
HDAC4P56524 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC6.19□□□□□ -1.42
HDAC4P56524 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
HDAC4P56524 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC6.19□□□□□ -1.42
HDAC4P56524 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC6.19□□□□□ -1.42
HDAC4P56524 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
HDAC4P56524 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
HDAC4P56524 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
HDAC4P56524 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC6.19□□□□□ -1.42
HDAC4P56524 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
HDAC4P56524 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
HDAC4P56524 AC004158.1-201ENST00000564508 4319 ntBASIC6.19□□□□□ -1.42
HDAC4P56524 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC6.19□□□□□ -1.42
HDAC4P56524 SELENOWP1-201ENST00000322792 252 ntBASIC6.19□□□□□ -1.42
HDAC4P56524 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
HDAC4P56524 AL121977.1-201ENST00000401636 979 ntBASIC6.19□□□□□ -1.42
HDAC4P56524 AL356968.2-201ENST00000412769 1257 ntBASIC6.19□□□□□ -1.42
HDAC4P56524 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC6.19□□□□□ -1.42
HDAC4P56524 NAP1L4P2-201ENST00000425958 899 ntBASIC6.19□□□□□ -1.42
HDAC4P56524 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC6.19□□□□□ -1.42
HDAC4P56524 USP24P1-201ENST00000433802 779 ntBASIC6.19□□□□□ -1.42
HDAC4P56524 RPS3AP38-201ENST00000435889 763 ntBASIC6.19□□□□□ -1.42
HDAC4P56524 ATP5LP2-201ENST00000440646 311 ntBASIC6.19□□□□□ -1.42
HDAC4P56524 BMS1P10-201ENST00000443754 1120 ntBASIC6.19□□□□□ -1.42
HDAC4P56524 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC6.19□□□□□ -1.42
HDAC4P56524 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC6.19□□□□□ -1.42
HDAC4P56524 GEMIN2P1-201ENST00000454246 752 ntBASIC6.19□□□□□ -1.42
HDAC4P56524 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC6.19□□□□□ -1.42
HDAC4P56524 CST12P-201ENST00000457644 362 ntBASIC6.19□□□□□ -1.42
HDAC4P56524 AC068228.1-201ENST00000461723 211 ntBASIC6.19□□□□□ -1.42
HDAC4P56524 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC6.19□□□□□ -1.42
HDAC4P56524 TRBV5-2-201ENST00000489095 273 ntBASIC6.19□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 85.1 ms