Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
CDH4P55283 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC5.86□□□□□ -1.47
CDH4P55283 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
CDH4P55283 MRE11P1-201ENST00000464884 2127 ntBASIC5.86□□□□□ -1.47
CDH4P55283 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
CDH4P55283 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC5.86□□□□□ -1.47
CDH4P55283 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC5.85□□□□□ -1.47
CDH4P55283 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC5.85□□□□□ -1.47
CDH4P55283 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC5.85□□□□□ -1.47
CDH4P55283 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC5.85□□□□□ -1.47
CDH4P55283 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CDH4P55283 OR5B12-201ENST00000302572 1054 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
CDH4P55283 RNA5SP30-201ENST00000365552 115 ntBASIC5.85□□□□□ -1.47
CDH4P55283 RN7SKP81-201ENST00000365603 331 ntBASIC5.85□□□□□ -1.47
CDH4P55283 RN7SKP279-201ENST00000411383 298 ntBASIC5.85□□□□□ -1.47
CDH4P55283 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC5.85□□□□□ -1.47
CDH4P55283 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC5.85□□□□□ -1.47
CDH4P55283 RNGTTP1-201ENST00000420965 728 ntBASIC5.85□□□□□ -1.47
CDH4P55283 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC5.85□□□□□ -1.47
CDH4P55283 KRT8P51-201ENST00000438938 274 ntBASIC5.85□□□□□ -1.47
CDH4P55283 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
CDH4P55283 AC138866.2-201ENST00000508650 584 ntBASIC5.85□□□□□ -1.47
CDH4P55283 PSMA4-209ENST00000559082 1094 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
CDH4P55283 HIRAP1-201ENST00000605318 787 ntBASIC5.85□□□□□ -1.47
CDH4P55283 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC5.85□□□□□ -1.47
CDH4P55283 AC010809.3-201ENST00000621310 641 ntBASIC5.85□□□□□ -1.47
CDH4P55283 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC5.85□□□□□ -1.47
CDH4P55283 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC5.85□□□□□ -1.47
CDH4P55283 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
CDH4P55283 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CDH4P55283 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC5.85□□□□□ -1.47
CDH4P55283 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
CDH4P55283 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CDH4P55283 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CDH4P55283 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
CDH4P55283 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC5.85□□□□□ -1.47
CDH4P55283 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
CDH4P55283 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
CDH4P55283 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
CDH4P55283 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
CDH4P55283 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
CDH4P55283 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC5.84□□□□□ -1.47
CDH4P55283 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
CDH4P55283 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
CDH4P55283 AL161912.4-201ENST00000623889 2468 ntBASIC5.84□□□□□ -1.47
CDH4P55283 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
CDH4P55283 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
CDH4P55283 RN7SKP69-201ENST00000365390 305 ntBASIC5.84□□□□□ -1.47
CDH4P55283 RNA5SP131-201ENST00000365452 119 ntBASIC5.84□□□□□ -1.47
CDH4P55283 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC5.84□□□□□ -1.47
CDH4P55283 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
CDH4P55283 RN7SKP293-201ENST00000411389 296 ntBASIC5.84□□□□□ -1.47
CDH4P55283 AC017078.1-201ENST00000416146 368 ntBASIC5.84□□□□□ -1.47
CDH4P55283 AC092651.1-201ENST00000426110 312 ntBASIC5.84□□□□□ -1.47
CDH4P55283 TAS2R39-201ENST00000446620 1017 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
CDH4P55283 YWHAEP1-201ENST00000453697 763 ntBASIC5.84□□□□□ -1.47
CDH4P55283 PDCL3P4-201ENST00000489621 720 ntBASIC5.84□□□□□ -1.47
CDH4P55283 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC5.84□□□□□ -1.47
CDH4P55283 AC093815.1-201ENST00000508637 280 ntBASIC5.84□□□□□ -1.47
CDH4P55283 C5orf46-203ENST00000515291 573 ntAPPRIS ALT1 TSL 1 (best) BASIC5.84□□□□□ -1.47
CDH4P55283 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC5.84□□□□□ -1.47
CDH4P55283 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC5.84□□□□□ -1.47
CDH4P55283 AGGF1P7-201ENST00000562369 913 ntBASIC5.84□□□□□ -1.47
CDH4P55283 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC5.84□□□□□ -1.47
CDH4P55283 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC5.84□□□□□ -1.47
CDH4P55283 AC016839.1-201ENST00000578162 867 ntBASIC5.84□□□□□ -1.47
CDH4P55283 MIR4505-201ENST00000582238 73 ntBASIC5.84□□□□□ -1.47
CDH4P55283 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC5.84□□□□□ -1.47
CDH4P55283 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC5.84□□□□□ -1.47
CDH4P55283 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC5.84□□□□□ -1.47
CDH4P55283 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC5.84□□□□□ -1.47
CDH4P55283 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC5.84□□□□□ -1.47
CDH4P55283 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC5.84□□□□□ -1.47
CDH4P55283 AL035661.1-201ENST00000620459 1144 ntBASIC5.84□□□□□ -1.47
CDH4P55283 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC5.84□□□□□ -1.47
CDH4P55283 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
CDH4P55283 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC5.84□□□□□ -1.47
CDH4P55283 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
CDH4P55283 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC5.84□□□□□ -1.47
CDH4P55283 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC5.84□□□□□ -1.47
CDH4P55283 SRRM1P3-201ENST00000426911 2678 ntBASIC5.84□□□□□ -1.47
CDH4P55283 AC004656.1-201ENST00000568479 4951 ntBASIC5.84□□□□□ -1.47
CDH4P55283 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC5.84□□□□□ -1.47
CDH4P55283 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
CDH4P55283 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
CDH4P55283 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
CDH4P55283 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.48
CDH4P55283 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC5.84□□□□□ -1.48
CDH4P55283 OR5AQ1P-202ENST00000641257 1534 ntBASIC5.84□□□□□ -1.48
CDH4P55283 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.48
CDH4P55283 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CDH4P55283 AL158152.1-201ENST00000602652 1435 ntBASIC5.83□□□□□ -1.48
CDH4P55283 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC5.83□□□□□ -1.48
CDH4P55283 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CDH4P55283 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CDH4P55283 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CDH4P55283 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC5.83□□□□□ -1.48
CDH4P55283 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CDH4P55283 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
CDH4P55283 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 69.8 ms