Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC5.86□□□□□ -1.47
NR1H2P55055 AC074141.1-201ENST00000588129 2995 ntBASIC5.86□□□□□ -1.47
NR1H2P55055 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC5.86□□□□□ -1.47
NR1H2P55055 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
NR1H2P55055 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
NR1H2P55055 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
NR1H2P55055 TGIF1-211ENST00000548489 1536 ntTSL 3 BASIC5.86□□□□□ -1.47
NR1H2P55055 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC5.86□□□□□ -1.47
NR1H2P55055 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
NR1H2P55055 AL512283.1-201ENST00000606756 1384 ntBASIC5.86□□□□□ -1.47
NR1H2P55055 SCML2-202ENST00000398048 1334 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
NR1H2P55055 TAS2R42-201ENST00000334266 945 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
NR1H2P55055 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
NR1H2P55055 RN7SKP269-201ENST00000365545 319 ntBASIC5.86□□□□□ -1.47
NR1H2P55055 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
NR1H2P55055 RPL5P19-201ENST00000404228 893 ntBASIC5.86□□□□□ -1.47
NR1H2P55055 AL136131.1-201ENST00000406079 803 ntBASIC5.86□□□□□ -1.47
NR1H2P55055 MIR1282-201ENST00000408865 101 ntBASIC5.86□□□□□ -1.47
NR1H2P55055 LINC00437-201ENST00000414161 791 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
NR1H2P55055 DPPA2P2-201ENST00000418220 897 ntBASIC5.86□□□□□ -1.47
NR1H2P55055 AC114498.1-201ENST00000423796 607 ntTSL 5 BASIC5.86□□□□□ -1.47
NR1H2P55055 RPS6P14-201ENST00000425165 719 ntBASIC5.86□□□□□ -1.47
NR1H2P55055 RPS27AP6-201ENST00000427962 448 ntBASIC5.86□□□□□ -1.47
NR1H2P55055 AC073508.1-201ENST00000428866 656 ntBASIC5.86□□□□□ -1.47
NR1H2P55055 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC5.86□□□□□ -1.47
NR1H2P55055 AC073410.1-201ENST00000435125 589 ntBASIC5.86□□□□□ -1.47
NR1H2P55055 AC092162.2-201ENST00000438143 532 ntTSL 4 BASIC5.86□□□□□ -1.47
NR1H2P55055 NFIA-AS2-203ENST00000438559 1275 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
NR1H2P55055 RPL12P11-201ENST00000439970 501 ntBASIC5.86□□□□□ -1.47
NR1H2P55055 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
NR1H2P55055 ZNF736P11Y-201ENST00000442535 1213 ntBASIC5.86□□□□□ -1.47
NR1H2P55055 ZNF736P12Y-201ENST00000443152 1243 ntBASIC5.86□□□□□ -1.47
NR1H2P55055 PFN1P11-201ENST00000445829 389 ntBASIC5.86□□□□□ -1.47
NR1H2P55055 AC007099.1-201ENST00000451622 1185 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
NR1H2P55055 ZNF736P4Y-201ENST00000454995 1243 ntBASIC5.86□□□□□ -1.47
NR1H2P55055 SEPT7P3-201ENST00000455017 621 ntBASIC5.86□□□□□ -1.47
NR1H2P55055 MTND2P39-201ENST00000457230 764 ntBASIC5.86□□□□□ -1.47
NR1H2P55055 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC5.86□□□□□ -1.47
NR1H2P55055 RN7SL413P-201ENST00000482700 297 ntBASIC5.86□□□□□ -1.47
NR1H2P55055 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC5.86□□□□□ -1.47
NR1H2P55055 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC5.86□□□□□ -1.47
NR1H2P55055 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC5.86□□□□□ -1.47
NR1H2P55055 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC5.86□□□□□ -1.47
NR1H2P55055 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC5.86□□□□□ -1.47
NR1H2P55055 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC5.86□□□□□ -1.47
NR1H2P55055 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC5.86□□□□□ -1.47
NR1H2P55055 AP003049.1-201ENST00000529418 457 ntBASIC5.86□□□□□ -1.47
NR1H2P55055 AC124891.1-201ENST00000536322 519 ntBASIC5.86□□□□□ -1.47
NR1H2P55055 NOP56P3-201ENST00000549457 385 ntBASIC5.86□□□□□ -1.47
NR1H2P55055 UBE2N-204ENST00000549833 960 ntTSL 3 BASIC5.86□□□□□ -1.47
NR1H2P55055 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC5.86□□□□□ -1.47
NR1H2P55055 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC5.86□□□□□ -1.47
NR1H2P55055 AC025283.1-201ENST00000572039 734 ntBASIC5.86□□□□□ -1.47
NR1H2P55055 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC5.86□□□□□ -1.47
NR1H2P55055 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC5.86□□□□□ -1.47
NR1H2P55055 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC5.86□□□□□ -1.47
NR1H2P55055 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC5.86□□□□□ -1.47
NR1H2P55055 AC006262.3-201ENST00000597337 258 ntTSL 3 BASIC5.86□□□□□ -1.47
NR1H2P55055 AC008764.3-201ENST00000597357 432 ntTSL 5 BASIC5.86□□□□□ -1.47
NR1H2P55055 AC091133.5-201ENST00000603088 301 ntBASIC5.86□□□□□ -1.47
NR1H2P55055 MRPL57P1-201ENST00000621486 265 ntBASIC5.86□□□□□ -1.47
NR1H2P55055 AC074140.1-201ENST00000621617 208 ntBASIC5.86□□□□□ -1.47
NR1H2P55055 AL391262.2-201ENST00000622466 494 ntBASIC5.86□□□□□ -1.47
NR1H2P55055 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
NR1H2P55055 AL049767.1-201ENST00000636811 514 ntTSL 5 BASIC5.86□□□□□ -1.47
NR1H2P55055 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
NR1H2P55055 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC5.86□□□□□ -1.47
NR1H2P55055 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
NR1H2P55055 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC5.86□□□□□ -1.47
NR1H2P55055 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
NR1H2P55055 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.47
NR1H2P55055 KIAA0895-201ENST00000297063 4153 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
NR1H2P55055 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC5.86□□□□□ -1.47
NR1H2P55055 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
NR1H2P55055 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC5.86□□□□□ -1.47
NR1H2P55055 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
NR1H2P55055 LINC01931-201ENST00000295052 1832 ntTSL 2 BASIC5.85□□□□□ -1.47
NR1H2P55055 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.85□□□□□ -1.47
NR1H2P55055 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
NR1H2P55055 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
NR1H2P55055 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
NR1H2P55055 RGS22-215ENST00000523437 3975 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
NR1H2P55055 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
NR1H2P55055 TERB2-201ENST00000340827 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
NR1H2P55055 U3.10-201ENST00000364459 214 ntBASIC5.85□□□□□ -1.47
NR1H2P55055 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
NR1H2P55055 RNA5SP122-201ENST00000384457 108 ntBASIC5.85□□□□□ -1.47
NR1H2P55055 CAPSL-201ENST00000397366 969 ntAPPRIS P1 TSL 3 BASIC5.85□□□□□ -1.47
NR1H2P55055 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC5.85□□□□□ -1.47
NR1H2P55055 AL357078.2-201ENST00000416486 427 ntBASIC5.85□□□□□ -1.47
NR1H2P55055 MRPS21P5-201ENST00000417885 231 ntBASIC5.85□□□□□ -1.47
NR1H2P55055 LINC00352-201ENST00000425800 552 ntTSL 3 BASIC5.85□□□□□ -1.47
NR1H2P55055 RPS3AP38-201ENST00000435889 763 ntBASIC5.85□□□□□ -1.47
NR1H2P55055 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC5.85□□□□□ -1.47
NR1H2P55055 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC5.85□□□□□ -1.47
NR1H2P55055 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC5.85□□□□□ -1.47
NR1H2P55055 AC073610.1-201ENST00000489971 396 ntBASIC5.85□□□□□ -1.47
NR1H2P55055 LINC01322-202ENST00000494915 594 ntTSL 4 BASIC5.85□□□□□ -1.47
NR1H2P55055 AC092903.2-201ENST00000510244 427 ntTSL 5 BASIC5.85□□□□□ -1.47
NR1H2P55055 AC008443.6-204ENST00000511517 738 ntTSL 2 BASIC5.85□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 80 ms