Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC7.11□□□□□ -1.27
PMS1P54277 AC001226.2-204ENST00000638101 2645 ntAPPRIS ALT2 TSL 5 BASIC7.11□□□□□ -1.27
PMS1P54277 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC7.11□□□□□ -1.27
PMS1P54277 CUBNP3-201ENST00000457461 1784 ntBASIC7.1□□□□□ -1.27
PMS1P54277 AL078595.2-201ENST00000605309 1780 ntBASIC7.1□□□□□ -1.27
PMS1P54277 AC005261.4-201ENST00000600047 1385 ntBASIC7.1□□□□□ -1.27
PMS1P54277 APOOL-202ENST00000613473 6445 ntAPPRIS ALT1 TSL 5 BASIC7.1□□□□□ -1.27
PMS1P54277 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC7.1□□□□□ -1.27
PMS1P54277 DNAJC16-202ENST00000375847 6069 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
PMS1P54277 LCP2-201ENST00000046794 4678 ntAPPRIS P2 TSL 1 (best) BASIC7.1□□□□□ -1.27
PMS1P54277 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC7.1□□□□□ -1.27
PMS1P54277 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
PMS1P54277 BMS1P3-201ENST00000372011 932 ntBASIC7.1□□□□□ -1.27
PMS1P54277 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC7.1□□□□□ -1.27
PMS1P54277 Y_RNA.472-201ENST00000384322 102 ntBASIC7.1□□□□□ -1.27
PMS1P54277 RNU6-316P-201ENST00000391027 107 ntBASIC7.1□□□□□ -1.27
PMS1P54277 ZNF37CP-201ENST00000406795 241 ntBASIC7.1□□□□□ -1.27
PMS1P54277 ABCA12-203ENST00000412081 485 ntTSL 2 BASIC7.1□□□□□ -1.27
PMS1P54277 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC7.1□□□□□ -1.27
PMS1P54277 RANP6-201ENST00000413691 644 ntBASIC7.1□□□□□ -1.27
PMS1P54277 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC7.1□□□□□ -1.27
PMS1P54277 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC7.1□□□□□ -1.27
PMS1P54277 AL390023.1-201ENST00000428836 262 ntBASIC7.1□□□□□ -1.27
PMS1P54277 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC7.1□□□□□ -1.27
PMS1P54277 PTGES3P1-201ENST00000439531 483 ntBASIC7.1□□□□□ -1.27
PMS1P54277 EXTL2P1-201ENST00000446218 416 ntBASIC7.1□□□□□ -1.27
PMS1P54277 AL020997.1-201ENST00000446554 349 ntBASIC7.1□□□□□ -1.27
PMS1P54277 OTX2P1-201ENST00000450956 354 ntBASIC7.1□□□□□ -1.27
PMS1P54277 AKR1D1P1-201ENST00000457236 936 ntBASIC7.1□□□□□ -1.27
PMS1P54277 TREML3P-201ENST00000457327 501 ntBASIC7.1□□□□□ -1.27
PMS1P54277 AC018980.1-201ENST00000457848 862 ntTSL 3 BASIC7.1□□□□□ -1.27
PMS1P54277 RN7SL165P-201ENST00000477476 291 ntBASIC7.1□□□□□ -1.27
PMS1P54277 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC7.1□□□□□ -1.27
PMS1P54277 AC091965.3-201ENST00000506236 208 ntBASIC7.1□□□□□ -1.27
PMS1P54277 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC7.1□□□□□ -1.27
PMS1P54277 AC104417.1-201ENST00000523974 751 ntBASIC7.1□□□□□ -1.27
PMS1P54277 COX6C-210ENST00000524245 513 ntAPPRIS P1 TSL 2 BASIC7.1□□□□□ -1.27
PMS1P54277 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC7.1□□□□□ -1.27
PMS1P54277 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC7.1□□□□□ -1.27
PMS1P54277 DDIT3-204ENST00000551116 1067 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
PMS1P54277 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC7.1□□□□□ -1.27
PMS1P54277 AC010531.4-201ENST00000570286 576 ntTSL 4 BASIC7.1□□□□□ -1.27
PMS1P54277 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC7.1□□□□□ -1.27
PMS1P54277 RN7SL657P-201ENST00000582431 293 ntBASIC7.1□□□□□ -1.27
PMS1P54277 AC015802.2-201ENST00000589690 189 ntBASIC7.1□□□□□ -1.27
PMS1P54277 SUMO2P14-201ENST00000604488 293 ntBASIC7.1□□□□□ -1.27
PMS1P54277 LAPTM4BP2-201ENST00000604542 446 ntBASIC7.1□□□□□ -1.27
PMS1P54277 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC7.1□□□□□ -1.27
PMS1P54277 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC7.1□□□□□ -1.27
PMS1P54277 U1.41-201ENST00000617626 165 ntBASIC7.1□□□□□ -1.27
PMS1P54277 CCL15-204ENST00000617897 1073 ntAPPRIS P2 TSL 1 (best) BASIC7.1□□□□□ -1.27
PMS1P54277 AL603755.1-201ENST00000619504 163 ntBASIC7.1□□□□□ -1.27
PMS1P54277 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC7.1□□□□□ -1.27
PMS1P54277 MBD5-221ENST00000637159 902 ntTSL 5 BASIC7.1□□□□□ -1.27
PMS1P54277 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC7.1□□□□□ -1.27
PMS1P54277 BDNF-212ENST00000525528 4766 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
PMS1P54277 ZCCHC6-206ENST00000375963 5379 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
PMS1P54277 B3GALT5-203ENST00000380620 13170 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
PMS1P54277 ARHGAP32-201ENST00000310343 10111 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
PMS1P54277 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
PMS1P54277 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC7.1□□□□□ -1.27
PMS1P54277 CC2D2B-202ENST00000410012 1792 ntAPPRIS ALT2 TSL 2 BASIC7.1□□□□□ -1.27
PMS1P54277 AC006511.3-201ENST00000624929 1783 ntBASIC7.1□□□□□ -1.27
PMS1P54277 MBNL2-202ENST00000345429 4669 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
PMS1P54277 RBPJP6-201ENST00000411556 1431 ntBASIC7.1□□□□□ -1.27
PMS1P54277 AL356479.1-203ENST00000411798 1440 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
PMS1P54277 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
PMS1P54277 AC005821.1-203ENST00000577270 3145 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
PMS1P54277 AL137058.3-201ENST00000624531 3099 ntBASIC7.09□□□□□ -1.27
PMS1P54277 AC092451.3-201ENST00000625067 1343 ntBASIC7.09□□□□□ -1.27
PMS1P54277 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.27
PMS1P54277 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC7.09□□□□□ -1.27
PMS1P54277 PIGN-220ENST00000638167 4195 ntTSL 5 BASIC7.09□□□□□ -1.27
PMS1P54277 AC010132.2-201ENST00000295493 1043 ntBASIC7.09□□□□□ -1.27
PMS1P54277 UBE2Q2P1-202ENST00000354771 883 ntBASIC7.09□□□□□ -1.27
PMS1P54277 SNORD35A-201ENST00000363389 86 ntBASIC7.09□□□□□ -1.27
PMS1P54277 MRPS6P2-201ENST00000381143 370 ntBASIC7.09□□□□□ -1.27
PMS1P54277 SNORA7A-201ENST00000384765 139 ntBASIC7.09□□□□□ -1.27
PMS1P54277 AC026310.1-201ENST00000396004 378 ntBASIC7.09□□□□□ -1.27
PMS1P54277 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC7.09□□□□□ -1.27
PMS1P54277 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC7.09□□□□□ -1.27
PMS1P54277 AL035401.1-201ENST00000420572 871 ntTSL 3 BASIC7.09□□□□□ -1.27
PMS1P54277 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC7.09□□□□□ -1.27
PMS1P54277 AC007568.1-201ENST00000422912 471 ntBASIC7.09□□□□□ -1.27
PMS1P54277 AC083862.1-201ENST00000427378 1242 ntBASIC7.09□□□□□ -1.27
PMS1P54277 AC005345.1-201ENST00000431868 217 ntBASIC7.09□□□□□ -1.27
PMS1P54277 AC003989.1-201ENST00000434569 565 ntBASIC7.09□□□□□ -1.27
PMS1P54277 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC7.09□□□□□ -1.27
PMS1P54277 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC7.09□□□□□ -1.27
PMS1P54277 AL353768.1-201ENST00000439872 487 ntTSL 3 BASIC7.09□□□□□ -1.27
PMS1P54277 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC7.09□□□□□ -1.27
PMS1P54277 AC092967.1-201ENST00000449016 481 ntBASIC7.09□□□□□ -1.27
PMS1P54277 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC7.09□□□□□ -1.27
PMS1P54277 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC7.09□□□□□ -1.27
PMS1P54277 CCNB1IP1P3-201ENST00000454702 829 ntBASIC7.09□□□□□ -1.27
PMS1P54277 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC7.09□□□□□ -1.27
PMS1P54277 CST12P-201ENST00000457644 362 ntBASIC7.09□□□□□ -1.27
PMS1P54277 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC7.09□□□□□ -1.27
PMS1P54277 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC7.09□□□□□ -1.27
PMS1P54277 AC004815.1-201ENST00000484185 331 ntBASIC7.09□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 72.5 ms