Protein–RNA interactions for Protein: P50458

LHX2, LIM/homeobox protein Lhx2, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX2P50458 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
LHX2P50458 AL049634.1-201ENST00000453770 1720 ntBASIC5.11□□□□□ -1.59
LHX2P50458 AL034546.1-201ENST00000623740 3693 ntBASIC5.11□□□□□ -1.59
LHX2P50458 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
LHX2P50458 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
LHX2P50458 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
LHX2P50458 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC5.11□□□□□ -1.59
LHX2P50458 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
LHX2P50458 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC5.11□□□□□ -1.59
LHX2P50458 GNG5P2-201ENST00000372054 207 ntBASIC5.11□□□□□ -1.59
LHX2P50458 RNA5SP91-201ENST00000390902 119 ntBASIC5.11□□□□□ -1.59
LHX2P50458 U3.25-201ENST00000391209 220 ntBASIC5.11□□□□□ -1.59
LHX2P50458 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC5.11□□□□□ -1.59
LHX2P50458 AC079355.1-201ENST00000421770 223 ntBASIC5.11□□□□□ -1.59
LHX2P50458 TNPO1P1-201ENST00000423641 1138 ntBASIC5.11□□□□□ -1.59
LHX2P50458 LINC01762-201ENST00000423907 454 ntTSL 5 BASIC5.11□□□□□ -1.59
LHX2P50458 AL450996.1-201ENST00000445574 1202 ntBASIC5.11□□□□□ -1.59
LHX2P50458 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC5.11□□□□□ -1.59
LHX2P50458 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
LHX2P50458 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC5.11□□□□□ -1.59
LHX2P50458 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
LHX2P50458 RN7SL466P-201ENST00000497546 295 ntBASIC5.11□□□□□ -1.59
LHX2P50458 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC5.11□□□□□ -1.59
LHX2P50458 AC137800.1-201ENST00000562976 573 ntTSL 4 BASIC5.11□□□□□ -1.59
LHX2P50458 MIR1273E-201ENST00000581165 102 ntBASIC5.11□□□□□ -1.59
LHX2P50458 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC5.11□□□□□ -1.59
LHX2P50458 AL513327.3-201ENST00000602618 469 ntBASIC5.11□□□□□ -1.59
LHX2P50458 AL589674.2-201ENST00000604304 337 ntBASIC5.11□□□□□ -1.59
LHX2P50458 NANOGP3-201ENST00000605855 286 ntBASIC5.11□□□□□ -1.59
LHX2P50458 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC5.11□□□□□ -1.59
LHX2P50458 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
LHX2P50458 AL049767.1-202ENST00000637826 242 ntBASIC5.11□□□□□ -1.59
LHX2P50458 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
LHX2P50458 AC020656.2-201ENST00000613291 5309 ntBASIC5.11□□□□□ -1.59
LHX2P50458 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC5.11□□□□□ -1.59
LHX2P50458 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC5.11□□□□□ -1.59
LHX2P50458 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
LHX2P50458 AC114786.1-201ENST00000512892 1415 ntBASIC5.11□□□□□ -1.59
LHX2P50458 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC5.11□□□□□ -1.59
LHX2P50458 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
LHX2P50458 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
LHX2P50458 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC5.11□□□□□ -1.59
LHX2P50458 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC5.11□□□□□ -1.59
LHX2P50458 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
LHX2P50458 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
LHX2P50458 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC5.11□□□□□ -1.59
LHX2P50458 AC027279.4-201ENST00000624371 2072 ntBASIC5.11□□□□□ -1.59
LHX2P50458 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
LHX2P50458 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
LHX2P50458 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC5.11□□□□□ -1.59
LHX2P50458 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC5.11□□□□□ -1.59
LHX2P50458 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC5.1□□□□□ -1.59
LHX2P50458 AC140134.1-201ENST00000511830 3544 ntBASIC5.1□□□□□ -1.59
LHX2P50458 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC5.1□□□□□ -1.59
LHX2P50458 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
LHX2P50458 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
LHX2P50458 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC5.1□□□□□ -1.59
LHX2P50458 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
LHX2P50458 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
LHX2P50458 OR5B12-201ENST00000302572 1054 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
LHX2P50458 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
LHX2P50458 MIR143-201ENST00000385300 106 ntBASIC5.1□□□□□ -1.59
LHX2P50458 AP001610.2-201ENST00000415820 422 ntTSL 3 BASIC5.1□□□□□ -1.59
LHX2P50458 MEMO1P4-201ENST00000453590 386 ntBASIC5.1□□□□□ -1.59
LHX2P50458 AC011411.1-201ENST00000509592 876 ntBASIC5.1□□□□□ -1.59
LHX2P50458 RNA5SP362-201ENST00000516048 118 ntBASIC5.1□□□□□ -1.59
LHX2P50458 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
LHX2P50458 NRBF2P4-201ENST00000520874 850 ntBASIC5.1□□□□□ -1.59
LHX2P50458 MINCR-206ENST00000524335 499 ntTSL 2 BASIC5.1□□□□□ -1.59
LHX2P50458 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC5.1□□□□□ -1.59
LHX2P50458 ANP32E-205ENST00000533654 908 ntTSL 2 BASIC5.1□□□□□ -1.59
LHX2P50458 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
LHX2P50458 AL355834.1-201ENST00000556602 3965 ntBASIC5.1□□□□□ -1.59
LHX2P50458 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC5.1□□□□□ -1.59
LHX2P50458 AC087516.1-201ENST00000561236 2428 ntBASIC5.1□□□□□ -1.59
LHX2P50458 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC5.1□□□□□ -1.59
LHX2P50458 AL133481.2-203ENST00000607558 139 ntBASIC5.1□□□□□ -1.59
LHX2P50458 MIR6886-201ENST00000619864 61 ntBASIC5.1□□□□□ -1.59
LHX2P50458 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC5.1□□□□□ -1.59
LHX2P50458 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
LHX2P50458 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC5.1□□□□□ -1.59
LHX2P50458 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC5.1□□□□□ -1.59
LHX2P50458 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
LHX2P50458 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC5.1□□□□□ -1.59
LHX2P50458 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC5.1□□□□□ -1.59
LHX2P50458 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
LHX2P50458 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC5.1□□□□□ -1.59
LHX2P50458 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC5.09□□□□□ -1.59
LHX2P50458 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC5.09□□□□□ -1.59
LHX2P50458 AC139426.3-201ENST00000605648 2059 ntBASIC5.09□□□□□ -1.59
LHX2P50458 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
LHX2P50458 AFP-201ENST00000226359 1914 ntTSL 5 BASIC5.09□□□□□ -1.59
LHX2P50458 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
LHX2P50458 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC5.09□□□□□ -1.59
LHX2P50458 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
LHX2P50458 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
LHX2P50458 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
LHX2P50458 SNORA51.1-201ENST00000363243 140 ntBASIC5.09□□□□□ -1.59
LHX2P50458 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC5.09□□□□□ -1.59
LHX2P50458 AL391422.1-201ENST00000402155 436 ntBASIC5.09□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms