Protein–RNA interactions for Protein: P49662

CASP4, Caspase-4, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4P49662 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC6.13□□□□□ -1.43
CASP4P49662 MIR4311-201ENST00000580794 100 ntBASIC6.13□□□□□ -1.43
CASP4P49662 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC6.13□□□□□ -1.43
CASP4P49662 MIR4420-201ENST00000583944 77 ntBASIC6.13□□□□□ -1.43
CASP4P49662 AC008521.2-201ENST00000591021 259 ntBASIC6.13□□□□□ -1.43
CASP4P49662 AC020909.2-201ENST00000595005 626 ntTSL 2 BASIC6.13□□□□□ -1.43
CASP4P49662 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC6.13□□□□□ -1.43
CASP4P49662 AP001962.1-201ENST00000624114 559 ntBASIC6.13□□□□□ -1.43
CASP4P49662 SAMMSON-210ENST00000641260 1308 ntBASIC6.13□□□□□ -1.43
CASP4P49662 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
CASP4P49662 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC6.13□□□□□ -1.43
CASP4P49662 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
CASP4P49662 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
CASP4P49662 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC6.13□□□□□ -1.43
CASP4P49662 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
CASP4P49662 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
CASP4P49662 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
CASP4P49662 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
CASP4P49662 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC6.13□□□□□ -1.43
CASP4P49662 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
CASP4P49662 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC6.13□□□□□ -1.43
CASP4P49662 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC6.13□□□□□ -1.43
CASP4P49662 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC6.13□□□□□ -1.43
CASP4P49662 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
CASP4P49662 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
CASP4P49662 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC6.13□□□□□ -1.43
CASP4P49662 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
CASP4P49662 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
CASP4P49662 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
CASP4P49662 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
CASP4P49662 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC6.12□□□□□ -1.43
CASP4P49662 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
CASP4P49662 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC6.12□□□□□ -1.43
CASP4P49662 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
CASP4P49662 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
CASP4P49662 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC6.12□□□□□ -1.43
CASP4P49662 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
CASP4P49662 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC6.12□□□□□ -1.43
CASP4P49662 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
CASP4P49662 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC6.12□□□□□ -1.43
CASP4P49662 AC099670.2-201ENST00000435130 321 ntBASIC6.12□□□□□ -1.43
CASP4P49662 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
CASP4P49662 EEF1B2P6-201ENST00000445713 673 ntBASIC6.12□□□□□ -1.43
CASP4P49662 AL596266.1-201ENST00000448132 400 ntBASIC6.12□□□□□ -1.43
CASP4P49662 AP000547.1-201ENST00000454360 617 ntBASIC6.12□□□□□ -1.43
CASP4P49662 AC245041.2-201ENST00000479781 376 ntTSL 5 BASIC6.12□□□□□ -1.43
CASP4P49662 AC087672.1-201ENST00000479876 766 ntBASIC6.12□□□□□ -1.43
CASP4P49662 AC018709.1-201ENST00000509111 700 ntAPPRIS P1 TSL 3 BASIC6.12□□□□□ -1.43
CASP4P49662 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
CASP4P49662 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC6.12□□□□□ -1.43
CASP4P49662 IGKV2-19-201ENST00000518132 283 ntBASIC6.12□□□□□ -1.43
CASP4P49662 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC6.12□□□□□ -1.43
CASP4P49662 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC6.12□□□□□ -1.43
CASP4P49662 DCN-210ENST00000547568 823 ntTSL 3 BASIC6.12□□□□□ -1.43
CASP4P49662 AC084824.2-201ENST00000548906 345 ntBASIC6.12□□□□□ -1.43
CASP4P49662 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC6.12□□□□□ -1.43
CASP4P49662 DNM1P47-203ENST00000571780 12667 ntBASIC6.12□□□□□ -1.43
CASP4P49662 MIR3614-201ENST00000581261 86 ntBASIC6.12□□□□□ -1.43
CASP4P49662 HCG18-243ENST00000602498 327 ntTSL 3 BASIC6.12□□□□□ -1.43
CASP4P49662 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC6.12□□□□□ -1.43
CASP4P49662 PACRG-210ENST00000611387 279 ntTSL 5 BASIC6.12□□□□□ -1.43
CASP4P49662 AL390318.1-201ENST00000624564 687 ntBASIC6.12□□□□□ -1.43
CASP4P49662 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
CASP4P49662 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
CASP4P49662 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
CASP4P49662 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
CASP4P49662 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC6.12□□□□□ -1.43
CASP4P49662 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
CASP4P49662 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
CASP4P49662 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
CASP4P49662 OR4F13P-202ENST00000560066 2054 ntBASIC6.11□□□□□ -1.43
CASP4P49662 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC6.11□□□□□ -1.43
CASP4P49662 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
CASP4P49662 AC018628.1-201ENST00000624147 3819 ntBASIC6.11□□□□□ -1.43
CASP4P49662 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC6.11□□□□□ -1.43
CASP4P49662 OR13C1P-202ENST00000641378 2919 ntBASIC6.11□□□□□ -1.43
CASP4P49662 AL355488.2-201ENST00000609909 2850 ntBASIC6.11□□□□□ -1.43
CASP4P49662 AC114786.1-201ENST00000512892 1415 ntBASIC6.11□□□□□ -1.43
CASP4P49662 AC144833.1-201ENST00000567953 4089 ntBASIC6.11□□□□□ -1.43
CASP4P49662 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC6.11□□□□□ -1.43
CASP4P49662 RNF10P1-201ENST00000418589 369 ntBASIC6.11□□□□□ -1.43
CASP4P49662 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC6.11□□□□□ -1.43
CASP4P49662 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
CASP4P49662 AC005297.1-201ENST00000444765 862 ntBASIC6.11□□□□□ -1.43
CASP4P49662 SNORD125-201ENST00000459538 96 ntBASIC6.11□□□□□ -1.43
CASP4P49662 OARD1-211ENST00000480585 829 ntTSL 3 BASIC6.11□□□□□ -1.43
CASP4P49662 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC6.11□□□□□ -1.43
CASP4P49662 LINC02374-201ENST00000503637 743 ntTSL 3 BASIC6.11□□□□□ -1.43
CASP4P49662 CYCSP22-201ENST00000517555 339 ntBASIC6.11□□□□□ -1.43
CASP4P49662 AC122688.1-201ENST00000541494 223 ntBASIC6.11□□□□□ -1.43
CASP4P49662 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC6.11□□□□□ -1.43
CASP4P49662 AC009962.1-201ENST00000567327 3813 ntBASIC6.11□□□□□ -1.43
CASP4P49662 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC6.11□□□□□ -1.43
CASP4P49662 AP001496.3-201ENST00000580230 913 ntBASIC6.11□□□□□ -1.43
CASP4P49662 AC025574.2-201ENST00000615621 514 ntBASIC6.11□□□□□ -1.43
CASP4P49662 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
CASP4P49662 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC6.11□□□□□ -1.43
CASP4P49662 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
CASP4P49662 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC6.11□□□□□ -1.43
CASP4P49662 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 65.9 ms