Protein–RNA interactions for Protein: P49639

HOXA1, Homeobox protein Hox-A1, humanhuman

Predicted RBP Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1P49639 OR4V1P-201ENST00000525394 1140 ntBASIC5.03□□□□□ -1.6
HOXA1P49639 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC5.03□□□□□ -1.6
HOXA1P49639 CTNNA3-205ENST00000545309 555 ntTSL 5 BASIC5.03□□□□□ -1.6
HOXA1P49639 AC089984.3-201ENST00000552838 363 ntBASIC5.03□□□□□ -1.6
HOXA1P49639 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC5.03□□□□□ -1.6
HOXA1P49639 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC5.03□□□□□ -1.6
HOXA1P49639 AC127381.1-201ENST00000555979 939 ntBASIC5.03□□□□□ -1.6
HOXA1P49639 HNRNPA1P74-201ENST00000560782 835 ntBASIC5.03□□□□□ -1.6
HOXA1P49639 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC5.03□□□□□ -1.6
HOXA1P49639 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC5.03□□□□□ -1.6
HOXA1P49639 AC015911.2-201ENST00000585536 396 ntTSL 3 BASIC5.03□□□□□ -1.6
HOXA1P49639 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC5.03□□□□□ -1.6
HOXA1P49639 AC012254.2-203ENST00000588705 561 ntAPPRIS P5 TSL 2 BASIC5.03□□□□□ -1.6
HOXA1P49639 AC003682.1-201ENST00000599190 462 ntTSL 2 BASIC5.03□□□□□ -1.6
HOXA1P49639 AL133247.2-201ENST00000603236 482 ntBASIC5.03□□□□□ -1.6
HOXA1P49639 ASB8-218ENST00000629941 278 ntTSL 5 BASIC5.03□□□□□ -1.6
HOXA1P49639 AC006453.3-201ENST00000635891 377 ntBASIC5.03□□□□□ -1.6
HOXA1P49639 LINC02495-203ENST00000636704 242 ntBASIC5.03□□□□□ -1.6
HOXA1P49639 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
HOXA1P49639 CASP5-201ENST00000260315 1414 ntTSL 5 BASIC5.03□□□□□ -1.6
HOXA1P49639 ANAPC1P1-201ENST00000426186 2145 ntBASIC5.03□□□□□ -1.6
HOXA1P49639 RPL31P11-201ENST00000426558 1558 ntBASIC5.03□□□□□ -1.6
HOXA1P49639 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
HOXA1P49639 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC5.03□□□□□ -1.6
HOXA1P49639 MS4A6A-213ENST00000530839 1383 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
HOXA1P49639 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC5.03□□□□□ -1.6
HOXA1P49639 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC5.03□□□□□ -1.6
HOXA1P49639 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC5.03□□□□□ -1.6
HOXA1P49639 N4BP2L1-209ENST00000530622 1897 ntTSL 5 BASIC5.03□□□□□ -1.6
HOXA1P49639 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.02□□□□□ -1.61
HOXA1P49639 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
HOXA1P49639 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
HOXA1P49639 TTC39DP-201ENST00000416781 1688 ntBASIC5.02□□□□□ -1.61
HOXA1P49639 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
HOXA1P49639 TOPORSLP1-201ENST00000467693 2102 ntBASIC5.02□□□□□ -1.61
HOXA1P49639 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5.02□□□□□ -1.61
HOXA1P49639 DTNA-221ENST00000591182 1787 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
HOXA1P49639 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
HOXA1P49639 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
HOXA1P49639 KRTAP19-6-201ENST00000334046 330 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
HOXA1P49639 SNORD35A-201ENST00000363389 86 ntBASIC5.02□□□□□ -1.61
HOXA1P49639 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC5.02□□□□□ -1.61
HOXA1P49639 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC5.02□□□□□ -1.61
HOXA1P49639 ZNF669-202ENST00000366500 489 ntTSL 3 BASIC5.02□□□□□ -1.61
HOXA1P49639 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
HOXA1P49639 AL353692.2-201ENST00000407054 335 ntBASIC5.02□□□□□ -1.61
HOXA1P49639 PTPN2P1-201ENST00000423212 1072 ntBASIC5.02□□□□□ -1.61
HOXA1P49639 MTND4P24-201ENST00000424002 397 ntBASIC5.02□□□□□ -1.61
HOXA1P49639 MTCO2P1-201ENST00000424648 477 ntBASIC5.02□□□□□ -1.61
HOXA1P49639 LRRC23-208ENST00000436789 796 ntTSL 3 BASIC5.02□□□□□ -1.61
HOXA1P49639 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC5.02□□□□□ -1.61
HOXA1P49639 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC5.02□□□□□ -1.61
HOXA1P49639 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC5.02□□□□□ -1.61
HOXA1P49639 AL121578.2-201ENST00000448797 447 ntBASIC5.02□□□□□ -1.61
HOXA1P49639 AL591623.2-201ENST00000449978 222 ntBASIC5.02□□□□□ -1.61
HOXA1P49639 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC5.02□□□□□ -1.61
HOXA1P49639 AL136982.3-201ENST00000454709 688 ntTSL 3 BASIC5.02□□□□□ -1.61
HOXA1P49639 FCF1P6-201ENST00000456841 595 ntBASIC5.02□□□□□ -1.61
HOXA1P49639 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC5.02□□□□□ -1.61
HOXA1P49639 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC5.02□□□□□ -1.61
HOXA1P49639 RN7SL197P-201ENST00000466981 299 ntBASIC5.02□□□□□ -1.61
HOXA1P49639 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC5.02□□□□□ -1.61
HOXA1P49639 AC093870.1-201ENST00000506837 213 ntBASIC5.02□□□□□ -1.61
HOXA1P49639 AC010468.3-201ENST00000508225 458 ntBASIC5.02□□□□□ -1.61
HOXA1P49639 FABP5P6-201ENST00000510588 409 ntBASIC5.02□□□□□ -1.61
HOXA1P49639 IQCH-203ENST00000512104 1000 ntTSL 2 BASIC5.02□□□□□ -1.61
HOXA1P49639 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
HOXA1P49639 RNU6-1334P-201ENST00000516032 105 ntBASIC5.02□□□□□ -1.61
HOXA1P49639 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC5.02□□□□□ -1.61
HOXA1P49639 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC5.02□□□□□ -1.61
HOXA1P49639 AC113192.3-201ENST00000529152 742 ntBASIC5.02□□□□□ -1.61
HOXA1P49639 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
HOXA1P49639 RPA2P3-201ENST00000533268 770 ntBASIC5.02□□□□□ -1.61
HOXA1P49639 AC009729.1-201ENST00000548873 1133 ntBASIC5.02□□□□□ -1.61
HOXA1P49639 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC5.02□□□□□ -1.61
HOXA1P49639 RPL3P13-201ENST00000550415 216 ntBASIC5.02□□□□□ -1.61
HOXA1P49639 APAF1-211ENST00000552268 1143 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
HOXA1P49639 AL137230.1-202ENST00000553996 420 ntTSL 2 BASIC5.02□□□□□ -1.61
HOXA1P49639 AL161757.5-202ENST00000556696 570 ntTSL 3 BASIC5.02□□□□□ -1.61
HOXA1P49639 OR4C49P-201ENST00000563891 900 ntBASIC5.02□□□□□ -1.61
HOXA1P49639 AC104072.1-201ENST00000568817 668 ntBASIC5.02□□□□□ -1.61
HOXA1P49639 CHMP1B-AS1-201ENST00000586474 553 ntTSL 4 BASIC5.02□□□□□ -1.61
HOXA1P49639 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC5.02□□□□□ -1.61
HOXA1P49639 MIR132-201ENST00000591554 101 ntBASIC5.02□□□□□ -1.61
HOXA1P49639 AC020914.2-201ENST00000598220 430 ntTSL 4 BASIC5.02□□□□□ -1.61
HOXA1P49639 ZNF92P2-201ENST00000600543 1059 ntBASIC5.02□□□□□ -1.61
HOXA1P49639 AL078624.2-201ENST00000605063 554 ntBASIC5.02□□□□□ -1.61
HOXA1P49639 AC120053.1-201ENST00000607706 736 ntBASIC5.02□□□□□ -1.61
HOXA1P49639 AC104763.3-201ENST00000613765 618 ntBASIC5.02□□□□□ -1.61
HOXA1P49639 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC5.02□□□□□ -1.61
HOXA1P49639 AC016957.2-201ENST00000616998 848 ntBASIC5.02□□□□□ -1.61
HOXA1P49639 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC5.02□□□□□ -1.61
HOXA1P49639 AL049777.1-201ENST00000622740 518 ntBASIC5.02□□□□□ -1.61
HOXA1P49639 AC005618.4-201ENST00000625053 554 ntBASIC5.02□□□□□ -1.61
HOXA1P49639 AL078581.3-201ENST00000627304 744 ntTSL 5 BASIC5.02□□□□□ -1.61
HOXA1P49639 AC087565.2-201ENST00000637695 952 ntTSL 5 BASIC5.02□□□□□ -1.61
HOXA1P49639 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC5.02□□□□□ -1.61
HOXA1P49639 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
HOXA1P49639 AC005702.3-201ENST00000585345 1447 ntBASIC5.02□□□□□ -1.61
HOXA1P49639 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 126.3 ms