Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 MIR6071-201ENST00000616741 78 ntBASIC5.09□□□□□ -1.59
SRP9P49458 MIR6133-201ENST00000617057 108 ntBASIC5.09□□□□□ -1.59
SRP9P49458 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC5.09□□□□□ -1.59
SRP9P49458 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC5.09□□□□□ -1.59
SRP9P49458 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
SRP9P49458 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.09□□□□□ -1.59
SRP9P49458 AC007342.5-201ENST00000571340 2142 ntBASIC5.09□□□□□ -1.59
SRP9P49458 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
SRP9P49458 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.09□□□□□ -1.6
SRP9P49458 AC119674.1-202ENST00000641333 1860 ntBASIC5.09□□□□□ -1.6
SRP9P49458 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
SRP9P49458 AC002525.1-201ENST00000624392 1622 ntBASIC5.08□□□□□ -1.6
SRP9P49458 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
SRP9P49458 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
SRP9P49458 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC5.08□□□□□ -1.6
SRP9P49458 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
SRP9P49458 RNU6-249P-201ENST00000363016 102 ntBASIC5.08□□□□□ -1.6
SRP9P49458 YAF2-202ENST00000380790 1211 ntTSL 2 BASIC5.08□□□□□ -1.6
SRP9P49458 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC5.08□□□□□ -1.6
SRP9P49458 AC099677.3-201ENST00000427081 395 ntBASIC5.08□□□□□ -1.6
SRP9P49458 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
SRP9P49458 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC5.08□□□□□ -1.6
SRP9P49458 AL603882.1-201ENST00000463059 681 ntBASIC5.08□□□□□ -1.6
SRP9P49458 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC5.08□□□□□ -1.6
SRP9P49458 PFN1P8-201ENST00000497012 543 ntBASIC5.08□□□□□ -1.6
SRP9P49458 AC008629.2-201ENST00000503783 483 ntBASIC5.08□□□□□ -1.6
SRP9P49458 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC5.08□□□□□ -1.6
SRP9P49458 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC5.08□□□□□ -1.6
SRP9P49458 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC5.08□□□□□ -1.6
SRP9P49458 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC5.08□□□□□ -1.6
SRP9P49458 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC5.08□□□□□ -1.6
SRP9P49458 ASB8-202ENST00000535055 657 ntTSL 2 BASIC5.08□□□□□ -1.6
SRP9P49458 ASB8-203ENST00000535988 679 ntTSL 2 BASIC5.08□□□□□ -1.6
SRP9P49458 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC5.08□□□□□ -1.6
SRP9P49458 NELL2-211ENST00000548826 559 ntTSL 2 BASIC5.08□□□□□ -1.6
SRP9P49458 MYL6-213ENST00000549017 502 ntTSL 3 BASIC5.08□□□□□ -1.6
SRP9P49458 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC5.08□□□□□ -1.6
SRP9P49458 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC5.08□□□□□ -1.6
SRP9P49458 AP005119.1-201ENST00000580956 292 ntBASIC5.08□□□□□ -1.6
SRP9P49458 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC5.08□□□□□ -1.6
SRP9P49458 AL136131.3-201ENST00000607600 188 ntBASIC5.08□□□□□ -1.6
SRP9P49458 SLC8A1-AS1-218ENST00000610721 956 ntTSL 5 BASIC5.08□□□□□ -1.6
SRP9P49458 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
SRP9P49458 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC5.08□□□□□ -1.6
SRP9P49458 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC5.08□□□□□ -1.6
SRP9P49458 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
SRP9P49458 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
SRP9P49458 AC009962.1-201ENST00000567327 3813 ntBASIC5.08□□□□□ -1.6
SRP9P49458 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC5.08□□□□□ -1.6
SRP9P49458 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.08□□□□□ -1.6
SRP9P49458 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
SRP9P49458 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC5.08□□□□□ -1.6
SRP9P49458 AF287957.1-201ENST00000607368 1595 ntBASIC5.08□□□□□ -1.6
SRP9P49458 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC5.08□□□□□ -1.6
SRP9P49458 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
SRP9P49458 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
SRP9P49458 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC5.07□□□□□ -1.6
SRP9P49458 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
SRP9P49458 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
SRP9P49458 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
SRP9P49458 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.07□□□□□ -1.6
SRP9P49458 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC5.07□□□□□ -1.6
SRP9P49458 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
SRP9P49458 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
SRP9P49458 AL138820.1-201ENST00000617901 5305 ntBASIC5.07□□□□□ -1.6
SRP9P49458 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC5.07□□□□□ -1.6
SRP9P49458 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
SRP9P49458 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
SRP9P49458 RPL11P3-201ENST00000395256 523 ntBASIC5.07□□□□□ -1.6
SRP9P49458 AC016739.1-201ENST00000405359 345 ntBASIC5.07□□□□□ -1.6
SRP9P49458 MIRLET7DHG-201ENST00000416309 1294 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
SRP9P49458 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC5.07□□□□□ -1.6
SRP9P49458 AC110602.1-201ENST00000437414 318 ntBASIC5.07□□□□□ -1.6
SRP9P49458 AL158850.1-201ENST00000441249 914 ntTSL 3 BASIC5.07□□□□□ -1.6
SRP9P49458 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC5.07□□□□□ -1.6
SRP9P49458 ACA64.1-201ENST00000459171 127 ntBASIC5.07□□□□□ -1.6
SRP9P49458 AC099521.1-201ENST00000482557 334 ntBASIC5.07□□□□□ -1.6
SRP9P49458 ENSA-211ENST00000503345 793 ntTSL 3 BASIC5.07□□□□□ -1.6
SRP9P49458 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC5.07□□□□□ -1.6
SRP9P49458 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
SRP9P49458 AC027369.2-201ENST00000528030 440 ntBASIC5.07□□□□□ -1.6
SRP9P49458 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
SRP9P49458 AC079905.1-201ENST00000549280 475 ntBASIC5.07□□□□□ -1.6
SRP9P49458 AL359219.2-201ENST00000555184 348 ntBASIC5.07□□□□□ -1.6
SRP9P49458 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC5.07□□□□□ -1.6
SRP9P49458 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC5.07□□□□□ -1.6
SRP9P49458 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC5.07□□□□□ -1.6
SRP9P49458 AL021918.2-201ENST00000613415 194 ntBASIC5.07□□□□□ -1.6
SRP9P49458 AL445670.1-201ENST00000618889 801 ntBASIC5.07□□□□□ -1.6
SRP9P49458 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
SRP9P49458 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
SRP9P49458 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC5.07□□□□□ -1.6
SRP9P49458 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
SRP9P49458 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.07□□□□□ -1.6
SRP9P49458 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
SRP9P49458 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
SRP9P49458 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
SRP9P49458 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
SRP9P49458 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
SRP9P49458 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC5.07□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 111.5 ms