Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 CLEC12A-201ENST00000304361 1549 ntAPPRIS P4 TSL 1 (best) BASIC5.59□□□□□ -1.51
CENPAP49450 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CENPAP49450 AL031595.2-201ENST00000624215 19071 ntBASIC5.59□□□□□ -1.51
CENPAP49450 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CENPAP49450 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
CENPAP49450 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CENPAP49450 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CENPAP49450 GRXCR2-201ENST00000377976 2002 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
CENPAP49450 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC5.59□□□□□ -1.51
CENPAP49450 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
CENPAP49450 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CENPAP49450 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CENPAP49450 SAMD13-203ENST00000370670 565 ntAPPRIS P1 TSL 4 BASIC5.59□□□□□ -1.51
CENPAP49450 SMPX-201ENST00000379494 938 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CENPAP49450 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
CENPAP49450 AL445238.1-204ENST00000400311 463 ntBASIC5.59□□□□□ -1.51
CENPAP49450 ZNF37CP-201ENST00000406795 241 ntBASIC5.59□□□□□ -1.51
CENPAP49450 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
CENPAP49450 RPS26P38-201ENST00000414476 348 ntBASIC5.59□□□□□ -1.51
CENPAP49450 AL355581.1-201ENST00000415964 830 ntTSL 2 BASIC5.59□□□□□ -1.51
CENPAP49450 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC5.59□□□□□ -1.51
CENPAP49450 GPN3P1-201ENST00000423883 535 ntBASIC5.59□□□□□ -1.51
CENPAP49450 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC5.59□□□□□ -1.51
CENPAP49450 PRH1-201ENST00000428168 603 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
CENPAP49450 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC5.59□□□□□ -1.51
CENPAP49450 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC5.59□□□□□ -1.51
CENPAP49450 ELOCP3-201ENST00000439303 348 ntBASIC5.59□□□□□ -1.51
CENPAP49450 AC234771.4-201ENST00000441416 730 ntBASIC5.59□□□□□ -1.51
CENPAP49450 AC100823.1-201ENST00000442274 480 ntTSL 3 BASIC5.59□□□□□ -1.51
CENPAP49450 AL136460.1-201ENST00000442389 473 ntTSL 3 BASIC5.59□□□□□ -1.51
CENPAP49450 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC5.59□□□□□ -1.51
CENPAP49450 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC5.59□□□□□ -1.51
CENPAP49450 PPIAP32-201ENST00000449940 472 ntBASIC5.59□□□□□ -1.51
CENPAP49450 RPS27AP3-201ENST00000453803 454 ntBASIC5.59□□□□□ -1.51
CENPAP49450 RAB28P2-201ENST00000454299 641 ntBASIC5.59□□□□□ -1.51
CENPAP49450 RANP2-201ENST00000456833 229 ntBASIC5.59□□□□□ -1.51
CENPAP49450 EIF2S2P5-201ENST00000457635 968 ntBASIC5.59□□□□□ -1.51
CENPAP49450 AL445687.2-201ENST00000458156 728 ntBASIC5.59□□□□□ -1.51
CENPAP49450 RPL5P22-201ENST00000480199 884 ntBASIC5.59□□□□□ -1.51
CENPAP49450 AC015524.1-201ENST00000491585 472 ntBASIC5.59□□□□□ -1.51
CENPAP49450 AC015864.1-201ENST00000496512 544 ntBASIC5.59□□□□□ -1.51
CENPAP49450 AC122714.1-201ENST00000502510 459 ntBASIC5.59□□□□□ -1.51
CENPAP49450 AC116345.3-201ENST00000508255 449 ntTSL 3 BASIC5.59□□□□□ -1.51
CENPAP49450 KHDC1P1-201ENST00000511053 508 ntBASIC5.59□□□□□ -1.51
CENPAP49450 RNU6-1102P-201ENST00000516149 96 ntBASIC5.59□□□□□ -1.51
CENPAP49450 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC5.59□□□□□ -1.51
CENPAP49450 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC5.59□□□□□ -1.51
CENPAP49450 HMGB1P46-201ENST00000520062 610 ntBASIC5.59□□□□□ -1.51
CENPAP49450 TPT1-AS1-209ENST00000520585 818 ntTSL 5 BASIC5.59□□□□□ -1.51
CENPAP49450 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC5.59□□□□□ -1.51
CENPAP49450 AC092865.1-201ENST00000544395 1023 ntBASIC5.59□□□□□ -1.51
CENPAP49450 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC5.59□□□□□ -1.51
CENPAP49450 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC5.59□□□□□ -1.51
CENPAP49450 AL121839.1-201ENST00000556233 1185 ntBASIC5.59□□□□□ -1.51
CENPAP49450 AC037479.1-201ENST00000558361 625 ntBASIC5.59□□□□□ -1.51
CENPAP49450 AC018845.1-201ENST00000564193 744 ntTSL 2 BASIC5.59□□□□□ -1.51
CENPAP49450 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC5.59□□□□□ -1.51
CENPAP49450 AC019322.1-201ENST00000571869 389 ntBASIC5.59□□□□□ -1.51
CENPAP49450 AC012593.1-208ENST00000587791 696 ntTSL 5 BASIC5.59□□□□□ -1.51
CENPAP49450 AC006305.2-201ENST00000589617 552 ntTSL 4 BASIC5.59□□□□□ -1.51
CENPAP49450 AC005332.4-201ENST00000592752 579 ntBASIC5.59□□□□□ -1.51
CENPAP49450 AC006262.3-201ENST00000597337 258 ntTSL 3 BASIC5.59□□□□□ -1.51
CENPAP49450 AC011516.1-201ENST00000599129 180 ntTSL 3 BASIC5.59□□□□□ -1.51
CENPAP49450 ZNF92P2-201ENST00000600543 1059 ntBASIC5.59□□□□□ -1.51
CENPAP49450 AC011458.1-201ENST00000604034 617 ntBASIC5.59□□□□□ -1.51
CENPAP49450 AC135178.6-201ENST00000605314 398 ntBASIC5.59□□□□□ -1.51
CENPAP49450 AC097467.3-215ENST00000609486 793 ntTSL 5 BASIC5.59□□□□□ -1.51
CENPAP49450 AC097467.3-214ENST00000610249 843 ntTSL 5 BASIC5.59□□□□□ -1.51
CENPAP49450 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC5.59□□□□□ -1.51
CENPAP49450 MIR6070-201ENST00000613967 103 ntBASIC5.59□□□□□ -1.51
CENPAP49450 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC5.59□□□□□ -1.51
CENPAP49450 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
CENPAP49450 AL136984.1-201ENST00000607611 1893 ntBASIC5.59□□□□□ -1.51
CENPAP49450 ZNF675-201ENST00000359788 2301 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CENPAP49450 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CENPAP49450 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC5.59□□□□□ -1.52
CENPAP49450 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC5.59□□□□□ -1.52
CENPAP49450 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.52
CENPAP49450 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC5.58□□□□□ -1.52
CENPAP49450 BTBD10P1-201ENST00000549824 1352 ntBASIC5.58□□□□□ -1.52
CENPAP49450 SSXP3-201ENST00000442971 1300 ntBASIC5.58□□□□□ -1.52
CENPAP49450 MTND4P9-201ENST00000507819 1346 ntBASIC5.58□□□□□ -1.52
CENPAP49450 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CENPAP49450 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CENPAP49450 SNORA63.3-201ENST00000362682 132 ntBASIC5.58□□□□□ -1.52
CENPAP49450 RNU6-650P-201ENST00000365658 111 ntBASIC5.58□□□□□ -1.52
CENPAP49450 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
CENPAP49450 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
CENPAP49450 MIR620-201ENST00000385232 95 ntBASIC5.58□□□□□ -1.52
CENPAP49450 AC233289.1-201ENST00000403700 508 ntBASIC5.58□□□□□ -1.52
CENPAP49450 LINC00352-201ENST00000425800 552 ntTSL 3 BASIC5.58□□□□□ -1.52
CENPAP49450 VTI1BP4-201ENST00000427516 527 ntBASIC5.58□□□□□ -1.52
CENPAP49450 RPS26P4-201ENST00000431743 355 ntBASIC5.58□□□□□ -1.52
CENPAP49450 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC5.58□□□□□ -1.52
CENPAP49450 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC5.58□□□□□ -1.52
CENPAP49450 AC114752.1-201ENST00000448204 289 ntTSL 3 BASIC5.58□□□□□ -1.52
CENPAP49450 RPL31P11-202ENST00000454082 372 ntBASIC5.58□□□□□ -1.52
CENPAP49450 MTND6P32-201ENST00000457611 483 ntBASIC5.58□□□□□ -1.52
CENPAP49450 AC073594.1-201ENST00000462065 364 ntBASIC5.58□□□□□ -1.52
CENPAP49450 AC078857.1-201ENST00000469870 667 ntBASIC5.58□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 86.5 ms