Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 BTG4-203ENST00000525791 1394 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
LHX1P48742 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
LHX1P48742 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
LHX1P48742 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
LHX1P48742 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
LHX1P48742 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
LHX1P48742 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
LHX1P48742 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
LHX1P48742 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
LHX1P48742 SNORA70.9-201ENST00000384370 135 ntBASIC6.06□□□□□ -1.44
LHX1P48742 LINC00463-201ENST00000413501 1147 ntTSL 3 BASIC6.06□□□□□ -1.44
LHX1P48742 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC6.06□□□□□ -1.44
LHX1P48742 TNPO1P1-201ENST00000423641 1138 ntBASIC6.06□□□□□ -1.44
LHX1P48742 AL121776.1-201ENST00000429337 372 ntBASIC6.06□□□□□ -1.44
LHX1P48742 USP24P1-201ENST00000433802 779 ntBASIC6.06□□□□□ -1.44
LHX1P48742 AC073909.1-201ENST00000447112 999 ntBASIC6.06□□□□□ -1.44
LHX1P48742 LINC01765-201ENST00000448680 491 ntTSL 2 BASIC6.06□□□□□ -1.44
LHX1P48742 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC6.06□□□□□ -1.44
LHX1P48742 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC6.06□□□□□ -1.44
LHX1P48742 LDHBP2-201ENST00000456969 1005 ntBASIC6.06□□□□□ -1.44
LHX1P48742 AC090589.1-201ENST00000473109 362 ntBASIC6.06□□□□□ -1.44
LHX1P48742 AL133372.1-201ENST00000493565 745 ntBASIC6.06□□□□□ -1.44
LHX1P48742 DUTP1-201ENST00000493631 470 ntBASIC6.06□□□□□ -1.44
LHX1P48742 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC6.06□□□□□ -1.44
LHX1P48742 AC018709.1-201ENST00000509111 700 ntAPPRIS P1 TSL 3 BASIC6.06□□□□□ -1.44
LHX1P48742 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC6.06□□□□□ -1.44
LHX1P48742 RNU4-18P-201ENST00000516751 149 ntBASIC6.06□□□□□ -1.44
LHX1P48742 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC6.06□□□□□ -1.44
LHX1P48742 ANP32E-205ENST00000533654 908 ntTSL 2 BASIC6.06□□□□□ -1.44
LHX1P48742 LINC02422-201ENST00000535163 852 ntTSL 3 BASIC6.06□□□□□ -1.44
LHX1P48742 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC6.06□□□□□ -1.44
LHX1P48742 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC6.06□□□□□ -1.44
LHX1P48742 AGGF1P7-201ENST00000562369 913 ntBASIC6.06□□□□□ -1.44
LHX1P48742 RN7SL753P-201ENST00000581238 290 ntBASIC6.06□□□□□ -1.44
LHX1P48742 HCG18-243ENST00000602498 327 ntTSL 3 BASIC6.06□□□□□ -1.44
LHX1P48742 AC104695.2-201ENST00000605056 775 ntBASIC6.06□□□□□ -1.44
LHX1P48742 AC004477.3-201ENST00000614061 590 ntBASIC6.06□□□□□ -1.44
LHX1P48742 MIR6729-201ENST00000618194 65 ntBASIC6.06□□□□□ -1.44
LHX1P48742 LINC01963-201ENST00000562038 3148 ntBASIC6.06□□□□□ -1.44
LHX1P48742 LINC02019-201ENST00000608605 2060 ntBASIC6.06□□□□□ -1.44
LHX1P48742 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
LHX1P48742 AC114786.1-201ENST00000512892 1415 ntBASIC6.06□□□□□ -1.44
LHX1P48742 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC6.06□□□□□ -1.44
LHX1P48742 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC6.05□□□□□ -1.44
LHX1P48742 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
LHX1P48742 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC6.05□□□□□ -1.44
LHX1P48742 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
LHX1P48742 OR5B12-201ENST00000302572 1054 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
LHX1P48742 RNA5SP91-201ENST00000390902 119 ntBASIC6.05□□□□□ -1.44
LHX1P48742 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC6.05□□□□□ -1.44
LHX1P48742 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC6.05□□□□□ -1.44
LHX1P48742 OR6E1P-201ENST00000414424 923 ntBASIC6.05□□□□□ -1.44
LHX1P48742 AL157938.2-207ENST00000415391 884 ntTSL 2 BASIC6.05□□□□□ -1.44
LHX1P48742 AL513325.1-201ENST00000417716 1034 ntBASIC6.05□□□□□ -1.44
LHX1P48742 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC6.05□□□□□ -1.44
LHX1P48742 RNGTTP1-201ENST00000420965 728 ntBASIC6.05□□□□□ -1.44
LHX1P48742 KATNBL1P2-201ENST00000433311 835 ntBASIC6.05□□□□□ -1.44
LHX1P48742 DNAJC19P5-201ENST00000443295 316 ntBASIC6.05□□□□□ -1.44
LHX1P48742 OR2AF1P-201ENST00000454899 889 ntBASIC6.05□□□□□ -1.44
LHX1P48742 RN7SL466P-201ENST00000497546 295 ntBASIC6.05□□□□□ -1.44
LHX1P48742 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC6.05□□□□□ -1.44
LHX1P48742 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC6.05□□□□□ -1.44
LHX1P48742 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC6.05□□□□□ -1.44
LHX1P48742 AC090286.3-201ENST00000573133 187 ntBASIC6.05□□□□□ -1.44
LHX1P48742 MTATP6P25-201ENST00000574491 261 ntBASIC6.05□□□□□ -1.44
LHX1P48742 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC6.05□□□□□ -1.44
LHX1P48742 AL589674.2-201ENST00000604304 337 ntBASIC6.05□□□□□ -1.44
LHX1P48742 FAM72A-208ENST00000607379 1139 ntBASIC6.05□□□□□ -1.44
LHX1P48742 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
LHX1P48742 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC6.05□□□□□ -1.44
LHX1P48742 AFP-201ENST00000226359 1914 ntTSL 5 BASIC6.05□□□□□ -1.44
LHX1P48742 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC6.05□□□□□ -1.44
LHX1P48742 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
LHX1P48742 AC027279.4-201ENST00000624371 2072 ntBASIC6.05□□□□□ -1.44
LHX1P48742 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC6.05□□□□□ -1.44
LHX1P48742 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
LHX1P48742 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
LHX1P48742 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
LHX1P48742 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
LHX1P48742 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
LHX1P48742 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC6.04□□□□□ -1.44
LHX1P48742 AC134980.1-209ENST00000639059 2317 ntTSL 2 BASIC6.04□□□□□ -1.44
LHX1P48742 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
LHX1P48742 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC6.04□□□□□ -1.44
LHX1P48742 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC6.04□□□□□ -1.44
LHX1P48742 PTPRZ1-202ENST00000449182 4627 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
LHX1P48742 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC6.04□□□□□ -1.44
LHX1P48742 SNX24-202ENST00000395451 1050 ntTSL 3 BASIC6.04□□□□□ -1.44
LHX1P48742 RN7SKP279-201ENST00000411383 298 ntBASIC6.04□□□□□ -1.44
LHX1P48742 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC6.04□□□□□ -1.44
LHX1P48742 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC6.04□□□□□ -1.44
LHX1P48742 OR5W1P-201ENST00000423705 938 ntBASIC6.04□□□□□ -1.44
LHX1P48742 FMO7P-201ENST00000436045 768 ntBASIC6.04□□□□□ -1.44
LHX1P48742 C21orf91-OT1-203ENST00000439392 497 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
LHX1P48742 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
LHX1P48742 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC6.04□□□□□ -1.44
LHX1P48742 OR7L1P-201ENST00000456181 380 ntBASIC6.04□□□□□ -1.44
LHX1P48742 AC002075.1-201ENST00000457396 676 ntBASIC6.04□□□□□ -1.44
LHX1P48742 RNU6-775P-201ENST00000459318 96 ntBASIC6.04□□□□□ -1.44
LHX1P48742 RN7SL72P-201ENST00000460697 269 ntBASIC6.04□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 93.6 ms