Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 OR8G5-201ENST00000524943 1041 ntBASIC5.9□□□□□ -1.47
HTTP42858 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC5.9□□□□□ -1.47
HTTP42858 SEC22B-201ENST00000578049 6922 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
HTTP42858 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
HTTP42858 ASNSP1-204ENST00000641977 1664 ntBASIC5.89□□□□□ -1.47
HTTP42858 CREB3L2-207ENST00000616381 7133 ntTSL 5 BASIC5.89□□□□□ -1.47
HTTP42858 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
HTTP42858 NUMB-204ENST00000535282 3198 ntAPPRIS ALT1 TSL 5 BASIC5.89□□□□□ -1.47
HTTP42858 OAS2-202ENST00000392583 4734 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
HTTP42858 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
HTTP42858 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
HTTP42858 CLEC12A-202ENST00000350667 699 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
HTTP42858 RPL32P23-201ENST00000397237 405 ntBASIC5.89□□□□□ -1.47
HTTP42858 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC5.89□□□□□ -1.47
HTTP42858 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC5.89□□□□□ -1.47
HTTP42858 AL136455.1-201ENST00000441083 1240 ntBASIC5.89□□□□□ -1.47
HTTP42858 AL359073.1-201ENST00000448036 403 ntBASIC5.89□□□□□ -1.47
HTTP42858 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
HTTP42858 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
HTTP42858 AC020765.1-201ENST00000604296 328 ntBASIC5.89□□□□□ -1.47
HTTP42858 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC5.89□□□□□ -1.47
HTTP42858 ERG-208ENST00000417133 5023 ntAPPRIS ALT1 TSL 2 BASIC5.89□□□□□ -1.47
HTTP42858 IL22RA2-201ENST00000296980 2886 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
HTTP42858 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC5.89□□□□□ -1.47
HTTP42858 AC009962.1-201ENST00000567327 3813 ntBASIC5.89□□□□□ -1.47
HTTP42858 NRCAM-203ENST00000379024 5782 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
HTTP42858 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC5.89□□□□□ -1.47
HTTP42858 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
HTTP42858 MIR551A-201ENST00000385042 96 ntBASIC5.89□□□□□ -1.47
HTTP42858 AC109327.1-201ENST00000471666 403 ntBASIC5.89□□□□□ -1.47
HTTP42858 AC058823.1-201ENST00000485315 474 ntBASIC5.89□□□□□ -1.47
HTTP42858 RN7SL423P-201ENST00000486202 304 ntBASIC5.89□□□□□ -1.47
HTTP42858 AC138701.1-201ENST00000524329 714 ntBASIC5.89□□□□□ -1.47
HTTP42858 YWHABP2-201ENST00000540201 713 ntBASIC5.89□□□□□ -1.47
HTTP42858 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC5.89□□□□□ -1.47
HTTP42858 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC5.89□□□□□ -1.47
HTTP42858 HIP1-201ENST00000336926 8013 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
HTTP42858 PGR-202ENST00000325455 13748 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
HTTP42858 KIAA1671-201ENST00000358431 10490 ntAPPRIS P2 TSL 1 (best) BASIC5.89□□□□□ -1.47
HTTP42858 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC5.89□□□□□ -1.47
HTTP42858 AGAP1-207ENST00000428334 10090 ntTSL 5 BASIC5.89□□□□□ -1.47
HTTP42858 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC5.89□□□□□ -1.47
HTTP42858 CD200R1-201ENST00000295863 1692 ntTSL 2 BASIC5.89□□□□□ -1.47
HTTP42858 AKAP13-201ENST00000361243 9468 ntAPPRIS P4 TSL 1 (best) BASIC5.88□□□□□ -1.47
HTTP42858 COL4A6-203ENST00000394872 6750 ntTSL 5 BASIC5.88□□□□□ -1.47
HTTP42858 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
HTTP42858 METTL8-201ENST00000375258 8203 ntTSL 5 BASIC5.88□□□□□ -1.47
HTTP42858 OR52N1-202ENST00000641645 2545 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
HTTP42858 EFHC1-201ENST00000371068 6987 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
HTTP42858 AP005131.1-201ENST00000585366 4745 ntTSL 5 BASIC5.88□□□□□ -1.47
HTTP42858 AC023141.6-201ENST00000429418 337 ntBASIC5.88□□□□□ -1.47
HTTP42858 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
HTTP42858 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC5.88□□□□□ -1.47
HTTP42858 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC5.88□□□□□ -1.47
HTTP42858 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
HTTP42858 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
HTTP42858 ZNF283-203ENST00000588797 2428 ntTSL 2 BASIC5.88□□□□□ -1.47
HTTP42858 FANCM-202ENST00000542564 6167 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
HTTP42858 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
HTTP42858 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC5.88□□□□□ -1.47
HTTP42858 HCG18-239ENST00000454129 4433 ntTSL 4 BASIC5.88□□□□□ -1.47
HTTP42858 AL359922.2-201ENST00000581788 3017 ntBASIC5.88□□□□□ -1.47
HTTP42858 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC5.88□□□□□ -1.47
HTTP42858 BACH2-201ENST00000257749 9113 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
HTTP42858 CCDC85C-201ENST00000380243 16393 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
HTTP42858 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
HTTP42858 RNA5SP447-201ENST00000363749 119 ntBASIC5.88□□□□□ -1.47
HTTP42858 RNU1-24P-201ENST00000364285 165 ntBASIC5.88□□□□□ -1.47
HTTP42858 SVBP-202ENST00000372522 650 ntAPPRIS P1 TSL 3 BASIC5.88□□□□□ -1.47
HTTP42858 AL009179.1-201ENST00000406085 265 ntBASIC5.88□□□□□ -1.47
HTTP42858 RPEP3-201ENST00000425462 676 ntBASIC5.88□□□□□ -1.47
HTTP42858 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC5.88□□□□□ -1.47
HTTP42858 AC068831.4-201ENST00000556118 109 ntBASIC5.88□□□□□ -1.47
HTTP42858 AL163952.1-202ENST00000569625 600 ntBASIC5.88□□□□□ -1.47
HTTP42858 AL445465.1-206ENST00000609544 528 ntTSL 5 BASIC5.88□□□□□ -1.47
HTTP42858 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
HTTP42858 ZNF423-203ENST00000561648 7907 ntAPPRIS P3 TSL 5 BASIC5.88□□□□□ -1.47
HTTP42858 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC5.88□□□□□ -1.47
HTTP42858 ARHGAP32-202ENST00000392657 6556 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
HTTP42858 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
HTTP42858 MUC22-201ENST00000561890 6019 ntAPPRIS P1 TSL 2 BASIC5.88□□□□□ -1.47
HTTP42858 AC022034.1-201ENST00000512867 2156 ntBASIC5.88□□□□□ -1.47
HTTP42858 COL25A1-208ENST00000610288 4799 ntTSL 5 BASIC5.88□□□□□ -1.47
HTTP42858 ANKRD36BP2-207ENST00000622311 5398 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
HTTP42858 ARID1B-232ENST00000637904 5913 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
HTTP42858 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
HTTP42858 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
HTTP42858 RPL23AP17-201ENST00000401064 499 ntBASIC5.88□□□□□ -1.47
HTTP42858 AC096921.1-201ENST00000411661 375 ntBASIC5.88□□□□□ -1.47
HTTP42858 AL451136.1-201ENST00000435399 325 ntBASIC5.88□□□□□ -1.47
HTTP42858 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC5.88□□□□□ -1.47
HTTP42858 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC5.88□□□□□ -1.47
HTTP42858 snoU13.22-201ENST00000459428 104 ntBASIC5.88□□□□□ -1.47
HTTP42858 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC5.88□□□□□ -1.47
HTTP42858 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC5.88□□□□□ -1.47
HTTP42858 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC5.88□□□□□ -1.47
HTTP42858 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC5.88□□□□□ -1.47
HTTP42858 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC5.87□□□□□ -1.47
HTTP42858 STXBP5-201ENST00000321680 3456 ntAPPRIS ALT1 TSL 5 BASIC5.87□□□□□ -1.47
HTTP42858 HEMGN-201ENST00000259456 2192 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms