Protein–RNA interactions for Protein: P31269

HOXA9, Homeobox protein Hox-A9, humanhuman

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9P31269 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
HOXA9P31269 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
HOXA9P31269 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC5.99□□□□□ -1.45
HOXA9P31269 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
HOXA9P31269 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
HOXA9P31269 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
HOXA9P31269 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
HOXA9P31269 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
HOXA9P31269 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC5.99□□□□□ -1.45
HOXA9P31269 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
HOXA9P31269 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
HOXA9P31269 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC5.99□□□□□ -1.45
HOXA9P31269 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
HOXA9P31269 RNU4-2-201ENST00000365668 141 ntBASIC5.99□□□□□ -1.45
HOXA9P31269 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC5.99□□□□□ -1.45
HOXA9P31269 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
HOXA9P31269 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
HOXA9P31269 DPPA2P3-201ENST00000411853 655 ntBASIC5.99□□□□□ -1.45
HOXA9P31269 AC007394.1-201ENST00000421941 531 ntBASIC5.99□□□□□ -1.45
HOXA9P31269 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC5.99□□□□□ -1.45
HOXA9P31269 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC5.99□□□□□ -1.45
HOXA9P31269 BX679664.2-201ENST00000439282 283 ntBASIC5.99□□□□□ -1.45
HOXA9P31269 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC5.99□□□□□ -1.45
HOXA9P31269 RPL7P39-201ENST00000481157 744 ntBASIC5.99□□□□□ -1.45
HOXA9P31269 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC5.99□□□□□ -1.45
HOXA9P31269 AC024558.1-201ENST00000505008 528 ntBASIC5.99□□□□□ -1.45
HOXA9P31269 AC108941.2-201ENST00000506796 716 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
HOXA9P31269 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC5.99□□□□□ -1.45
HOXA9P31269 PFDN1-207ENST00000524074 395 ntTSL 5 BASIC5.99□□□□□ -1.45
HOXA9P31269 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC5.99□□□□□ -1.45
HOXA9P31269 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC5.99□□□□□ -1.45
HOXA9P31269 AC044860.2-201ENST00000561005 179 ntBASIC5.99□□□□□ -1.45
HOXA9P31269 PWRN1-206ENST00000565512 433 ntTSL 2 BASIC5.99□□□□□ -1.45
HOXA9P31269 MRPS21P7-201ENST00000566937 238 ntBASIC5.99□□□□□ -1.45
HOXA9P31269 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC5.99□□□□□ -1.45
HOXA9P31269 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC5.99□□□□□ -1.45
HOXA9P31269 AL138960.1-201ENST00000613838 513 ntBASIC5.99□□□□□ -1.45
HOXA9P31269 AC037198.3-201ENST00000616754 526 ntBASIC5.99□□□□□ -1.45
HOXA9P31269 AC005840.5-201ENST00000619166 599 ntBASIC5.99□□□□□ -1.45
HOXA9P31269 Metazoa_SRP.172-201ENST00000621807 265 ntBASIC5.99□□□□□ -1.45
HOXA9P31269 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC5.99□□□□□ -1.45
HOXA9P31269 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.99□□□□□ -1.45
HOXA9P31269 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
HOXA9P31269 AC087516.1-201ENST00000561236 2428 ntBASIC5.99□□□□□ -1.45
HOXA9P31269 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
HOXA9P31269 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC5.99□□□□□ -1.45
HOXA9P31269 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
HOXA9P31269 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
HOXA9P31269 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC5.99□□□□□ -1.45
HOXA9P31269 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC5.99□□□□□ -1.45
HOXA9P31269 AC109780.1-201ENST00000451768 1344 ntBASIC5.99□□□□□ -1.45
HOXA9P31269 CR383656.5-201ENST00000547616 1340 ntBASIC5.99□□□□□ -1.45
HOXA9P31269 AC079753.1-201ENST00000623243 3868 ntBASIC5.99□□□□□ -1.45
HOXA9P31269 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC5.99□□□□□ -1.45
HOXA9P31269 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
HOXA9P31269 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC5.98□□□□□ -1.45
HOXA9P31269 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC5.98□□□□□ -1.45
HOXA9P31269 RNA5SP514-201ENST00000363717 111 ntBASIC5.98□□□□□ -1.45
HOXA9P31269 MRM2-202ENST00000407040 582 ntTSL 3 BASIC5.98□□□□□ -1.45
HOXA9P31269 OR5W1P-201ENST00000423705 938 ntBASIC5.98□□□□□ -1.45
HOXA9P31269 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC5.98□□□□□ -1.45
HOXA9P31269 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC5.98□□□□□ -1.45
HOXA9P31269 RN7SL610P-201ENST00000463845 291 ntBASIC5.98□□□□□ -1.45
HOXA9P31269 UBA52P7-201ENST00000486088 380 ntBASIC5.98□□□□□ -1.45
HOXA9P31269 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC5.98□□□□□ -1.45
HOXA9P31269 AC090638.1-201ENST00000498296 909 ntBASIC5.98□□□□□ -1.45
HOXA9P31269 AC105384.2-201ENST00000508433 640 ntBASIC5.98□□□□□ -1.45
HOXA9P31269 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC5.98□□□□□ -1.45
HOXA9P31269 AC021146.10-201ENST00000515628 706 ntBASIC5.98□□□□□ -1.45
HOXA9P31269 MAL2-207ENST00000522828 603 ntTSL 3 BASIC5.98□□□□□ -1.45
HOXA9P31269 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC5.98□□□□□ -1.45
HOXA9P31269 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC5.98□□□□□ -1.45
HOXA9P31269 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC5.98□□□□□ -1.45
HOXA9P31269 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC5.98□□□□□ -1.45
HOXA9P31269 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC5.98□□□□□ -1.45
HOXA9P31269 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
HOXA9P31269 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC5.98□□□□□ -1.45
HOXA9P31269 SAMMSON-209ENST00000641222 1100 ntBASIC5.98□□□□□ -1.45
HOXA9P31269 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC5.98□□□□□ -1.45
HOXA9P31269 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
HOXA9P31269 AC007938.2-201ENST00000604666 2634 ntBASIC5.98□□□□□ -1.45
HOXA9P31269 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
HOXA9P31269 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC5.98□□□□□ -1.45
HOXA9P31269 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC5.98□□□□□ -1.45
HOXA9P31269 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
HOXA9P31269 AC053481.2-202ENST00000582394 1500 ntBASIC5.98□□□□□ -1.45
HOXA9P31269 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC5.98□□□□□ -1.45
HOXA9P31269 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC5.98□□□□□ -1.45
HOXA9P31269 C4BPAP1-201ENST00000415474 1893 ntBASIC5.98□□□□□ -1.45
HOXA9P31269 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
HOXA9P31269 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC5.98□□□□□ -1.45
HOXA9P31269 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
HOXA9P31269 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
HOXA9P31269 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC5.97□□□□□ -1.45
HOXA9P31269 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC5.97□□□□□ -1.45
HOXA9P31269 TRPM7-201ENST00000313478 10400 ntAPPRIS P3 TSL 1 (best) BASIC5.97□□□□□ -1.45
HOXA9P31269 HTR2A-202ENST00000542664 5429 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
HOXA9P31269 AC005725.1-201ENST00000577346 2607 ntBASIC5.97□□□□□ -1.45
HOXA9P31269 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
HOXA9P31269 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC5.97□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 94.6 ms