Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 MIR375-201ENST00000362103 64 ntBASIC5.73□□□□□ -1.49
XRCC1P18887 RN7SKP78-201ENST00000364711 318 ntBASIC5.73□□□□□ -1.49
XRCC1P18887 SNORA17A-201ENST00000391185 133 ntBASIC5.73□□□□□ -1.49
XRCC1P18887 NAP1L4P2-201ENST00000425958 899 ntBASIC5.73□□□□□ -1.49
XRCC1P18887 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
XRCC1P18887 AL136455.1-201ENST00000441083 1240 ntBASIC5.73□□□□□ -1.49
XRCC1P18887 FRG2FP-204ENST00000453982 852 ntBASIC5.73□□□□□ -1.49
XRCC1P18887 UBFD1P1-201ENST00000473259 814 ntBASIC5.73□□□□□ -1.49
XRCC1P18887 RPS17P15-201ENST00000475609 349 ntBASIC5.73□□□□□ -1.49
XRCC1P18887 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
XRCC1P18887 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
XRCC1P18887 AC104109.1-201ENST00000498563 436 ntBASIC5.73□□□□□ -1.49
XRCC1P18887 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
XRCC1P18887 AC111000.6-201ENST00000514471 709 ntBASIC5.73□□□□□ -1.49
XRCC1P18887 SNORA70.20-201ENST00000516848 126 ntBASIC5.73□□□□□ -1.49
XRCC1P18887 AC078899.1-201ENST00000521432 1185 ntBASIC5.73□□□□□ -1.49
XRCC1P18887 IGKV1OR22-1-201ENST00000521497 360 ntBASIC5.73□□□□□ -1.49
XRCC1P18887 AC109466.1-202ENST00000523648 748 ntTSL 3 BASIC5.73□□□□□ -1.49
XRCC1P18887 GNG2-208ENST00000554875 430 ntTSL 5 BASIC5.73□□□□□ -1.49
XRCC1P18887 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC5.73□□□□□ -1.49
XRCC1P18887 AC135626.1-201ENST00000556983 435 ntBASIC5.73□□□□□ -1.49
XRCC1P18887 WDR61-205ENST00000558459 884 ntTSL 3 BASIC5.73□□□□□ -1.49
XRCC1P18887 AP001496.3-201ENST00000580230 913 ntBASIC5.73□□□□□ -1.49
XRCC1P18887 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC5.73□□□□□ -1.49
XRCC1P18887 MRO-208ENST00000588444 866 ntTSL 3 BASIC5.73□□□□□ -1.49
XRCC1P18887 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC5.73□□□□□ -1.49
XRCC1P18887 AL049840.6-201ENST00000604583 345 ntBASIC5.73□□□□□ -1.49
XRCC1P18887 AP005431.1-201ENST00000618479 319 ntBASIC5.73□□□□□ -1.49
XRCC1P18887 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC5.73□□□□□ -1.49
XRCC1P18887 SNORA17.5-201ENST00000630429 132 ntBASIC5.73□□□□□ -1.49
XRCC1P18887 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
XRCC1P18887 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC5.73□□□□□ -1.49
XRCC1P18887 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC5.73□□□□□ -1.49
XRCC1P18887 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC5.73□□□□□ -1.49
XRCC1P18887 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
XRCC1P18887 AC239868.2-201ENST00000564237 4527 ntBASIC5.73□□□□□ -1.49
XRCC1P18887 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
XRCC1P18887 AC130304.1-201ENST00000622942 2385 ntBASIC5.73□□□□□ -1.49
XRCC1P18887 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC5.73□□□□□ -1.49
XRCC1P18887 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
XRCC1P18887 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
XRCC1P18887 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
XRCC1P18887 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
XRCC1P18887 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
XRCC1P18887 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC5.72□□□□□ -1.49
XRCC1P18887 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
XRCC1P18887 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC5.72□□□□□ -1.49
XRCC1P18887 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
XRCC1P18887 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
XRCC1P18887 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
XRCC1P18887 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
XRCC1P18887 AC087752.1-201ENST00000391360 558 ntBASIC5.72□□□□□ -1.49
XRCC1P18887 NPM1P37-201ENST00000403105 874 ntBASIC5.72□□□□□ -1.49
XRCC1P18887 LSM5-203ENST00000409782 649 ntTSL 5 BASIC5.72□□□□□ -1.49
XRCC1P18887 SDHDP6-201ENST00000414693 480 ntBASIC5.72□□□□□ -1.49
XRCC1P18887 AK4P4-201ENST00000419465 646 ntBASIC5.72□□□□□ -1.49
XRCC1P18887 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC5.72□□□□□ -1.49
XRCC1P18887 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC5.72□□□□□ -1.49
XRCC1P18887 NAP1L4P3-201ENST00000432820 1147 ntBASIC5.72□□□□□ -1.49
XRCC1P18887 AC138761.5-201ENST00000433967 325 ntBASIC5.72□□□□□ -1.49
XRCC1P18887 AC003991.1-210ENST00000434733 1048 ntTSL 3 BASIC5.72□□□□□ -1.49
XRCC1P18887 AC242426.1-201ENST00000435270 960 ntBASIC5.72□□□□□ -1.49
XRCC1P18887 AL663074.2-201ENST00000440621 479 ntBASIC5.72□□□□□ -1.49
XRCC1P18887 MED28P3-201ENST00000444288 531 ntBASIC5.72□□□□□ -1.49
XRCC1P18887 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC5.72□□□□□ -1.49
XRCC1P18887 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC5.72□□□□□ -1.49
XRCC1P18887 PFN1P6-201ENST00000476786 399 ntBASIC5.72□□□□□ -1.49
XRCC1P18887 PDCL3P4-201ENST00000489621 720 ntBASIC5.72□□□□□ -1.49
XRCC1P18887 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC5.72□□□□□ -1.49
XRCC1P18887 GTF2IP11-201ENST00000526931 420 ntBASIC5.72□□□□□ -1.49
XRCC1P18887 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC5.72□□□□□ -1.49
XRCC1P18887 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC5.72□□□□□ -1.49
XRCC1P18887 AC012146.2-201ENST00000576545 416 ntBASIC5.72□□□□□ -1.49
XRCC1P18887 AC006115.2-201ENST00000596823 202 ntBASIC5.72□□□□□ -1.49
XRCC1P18887 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
XRCC1P18887 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC5.72□□□□□ -1.49
XRCC1P18887 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
XRCC1P18887 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
XRCC1P18887 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
XRCC1P18887 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
XRCC1P18887 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
XRCC1P18887 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
XRCC1P18887 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
XRCC1P18887 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC5.72□□□□□ -1.49
XRCC1P18887 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
XRCC1P18887 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
XRCC1P18887 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC5.72□□□□□ -1.49
XRCC1P18887 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
XRCC1P18887 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
XRCC1P18887 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
XRCC1P18887 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
XRCC1P18887 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.72□□□□□ -1.49
XRCC1P18887 HCFC2P1-201ENST00000392864 1592 ntBASIC5.72□□□□□ -1.49
XRCC1P18887 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.49
XRCC1P18887 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC5.71□□□□□ -1.49
XRCC1P18887 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC5.71□□□□□ -1.5
XRCC1P18887 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC5.71□□□□□ -1.5
XRCC1P18887 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
XRCC1P18887 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC5.71□□□□□ -1.5
XRCC1P18887 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 97 ms