Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.44
PDGFRAP16234 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
PDGFRAP16234 AP001284.1-201ENST00000528393 2118 ntBASIC6.08□□□□□ -1.44
PDGFRAP16234 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC6.08□□□□□ -1.44
PDGFRAP16234 NAT2-201ENST00000286479 1322 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
PDGFRAP16234 AC117409.1-201ENST00000470499 1310 ntBASIC6.08□□□□□ -1.44
PDGFRAP16234 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
PDGFRAP16234 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
PDGFRAP16234 ANAPC10-201ENST00000309439 868 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
PDGFRAP16234 OR52B3P-201ENST00000314715 928 ntBASIC6.08□□□□□ -1.44
PDGFRAP16234 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
PDGFRAP16234 RNU1-150P-201ENST00000362491 162 ntBASIC6.08□□□□□ -1.44
PDGFRAP16234 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
PDGFRAP16234 RNA5SP122-201ENST00000384457 108 ntBASIC6.08□□□□□ -1.44
PDGFRAP16234 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
PDGFRAP16234 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC6.08□□□□□ -1.44
PDGFRAP16234 AL445213.1-201ENST00000412589 747 ntBASIC6.08□□□□□ -1.44
PDGFRAP16234 AC019205.1-201ENST00000421830 730 ntBASIC6.08□□□□□ -1.44
PDGFRAP16234 AL035660.1-201ENST00000422041 222 ntBASIC6.08□□□□□ -1.44
PDGFRAP16234 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC6.08□□□□□ -1.44
PDGFRAP16234 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC6.08□□□□□ -1.44
PDGFRAP16234 AC073109.1-201ENST00000445066 978 ntBASIC6.08□□□□□ -1.44
PDGFRAP16234 snoU13.29-201ENST00000459370 104 ntBASIC6.08□□□□□ -1.44
PDGFRAP16234 AC011476.1-201ENST00000466725 307 ntBASIC6.08□□□□□ -1.44
PDGFRAP16234 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC6.08□□□□□ -1.44
PDGFRAP16234 IGLV3-30-201ENST00000524362 298 ntBASIC6.08□□□□□ -1.44
PDGFRAP16234 RSF1-IT2-201ENST00000529656 566 ntTSL 5 BASIC6.08□□□□□ -1.44
PDGFRAP16234 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
PDGFRAP16234 AC008521.2-201ENST00000591021 259 ntBASIC6.08□□□□□ -1.44
PDGFRAP16234 FAM27E4-201ENST00000605259 342 ntBASIC6.08□□□□□ -1.44
PDGFRAP16234 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC6.08□□□□□ -1.44
PDGFRAP16234 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC6.08□□□□□ -1.44
PDGFRAP16234 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
PDGFRAP16234 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC6.08□□□□□ -1.44
PDGFRAP16234 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC6.08□□□□□ -1.44
PDGFRAP16234 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
PDGFRAP16234 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
PDGFRAP16234 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
PDGFRAP16234 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
PDGFRAP16234 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
PDGFRAP16234 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
PDGFRAP16234 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
PDGFRAP16234 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
PDGFRAP16234 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC6.07□□□□□ -1.44
PDGFRAP16234 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
PDGFRAP16234 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC6.07□□□□□ -1.44
PDGFRAP16234 CA1-225ENST00000626824 2405 ntTSL 5 BASIC6.07□□□□□ -1.44
PDGFRAP16234 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC6.07□□□□□ -1.44
PDGFRAP16234 THAP12P8-201ENST00000447914 2115 ntBASIC6.07□□□□□ -1.44
PDGFRAP16234 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
PDGFRAP16234 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC6.07□□□□□ -1.44
PDGFRAP16234 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC6.07□□□□□ -1.44
PDGFRAP16234 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC6.07□□□□□ -1.44
PDGFRAP16234 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
PDGFRAP16234 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
PDGFRAP16234 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC6.07□□□□□ -1.44
PDGFRAP16234 AL035696.2-201ENST00000407941 709 ntBASIC6.07□□□□□ -1.44
PDGFRAP16234 FIGN-202ENST00000409634 746 ntTSL 5 BASIC6.07□□□□□ -1.44
PDGFRAP16234 CASKP1-201ENST00000412870 582 ntBASIC6.07□□□□□ -1.44
PDGFRAP16234 MRPL53P1-201ENST00000414323 319 ntBASIC6.07□□□□□ -1.44
PDGFRAP16234 LINC01133-202ENST00000443364 1266 ntTSL 5 BASIC6.07□□□□□ -1.44
PDGFRAP16234 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC6.07□□□□□ -1.44
PDGFRAP16234 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
PDGFRAP16234 AP006222.1-205ENST00000450734 457 ntBASIC6.07□□□□□ -1.44
PDGFRAP16234 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC6.07□□□□□ -1.44
PDGFRAP16234 RPL12P39-201ENST00000455456 496 ntBASIC6.07□□□□□ -1.44
PDGFRAP16234 AC104849.1-201ENST00000462623 405 ntBASIC6.07□□□□□ -1.44
PDGFRAP16234 UBFD1P1-201ENST00000473259 814 ntBASIC6.07□□□□□ -1.44
PDGFRAP16234 AC093719.1-201ENST00000480427 441 ntBASIC6.07□□□□□ -1.44
PDGFRAP16234 AC105384.2-201ENST00000508433 640 ntBASIC6.07□□□□□ -1.44
PDGFRAP16234 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC6.07□□□□□ -1.44
PDGFRAP16234 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC6.07□□□□□ -1.44
PDGFRAP16234 AC114488.3-201ENST00000581333 480 ntTSL 4 BASIC6.07□□□□□ -1.44
PDGFRAP16234 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC6.07□□□□□ -1.44
PDGFRAP16234 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
PDGFRAP16234 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC6.07□□□□□ -1.44
PDGFRAP16234 AC093297.3-201ENST00000607056 2517 ntBASIC6.07□□□□□ -1.44
PDGFRAP16234 AC011933.2-201ENST00000578539 2790 ntBASIC6.07□□□□□ -1.44
PDGFRAP16234 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
PDGFRAP16234 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
PDGFRAP16234 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC6.07□□□□□ -1.44
PDGFRAP16234 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
PDGFRAP16234 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
PDGFRAP16234 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
PDGFRAP16234 NEPNP-201ENST00000404786 1371 ntBASIC6.06□□□□□ -1.44
PDGFRAP16234 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
PDGFRAP16234 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC6.06□□□□□ -1.44
PDGFRAP16234 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
PDGFRAP16234 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
PDGFRAP16234 RNA5SP500-201ENST00000364486 119 ntBASIC6.06□□□□□ -1.44
PDGFRAP16234 RPL11P3-201ENST00000395256 523 ntBASIC6.06□□□□□ -1.44
PDGFRAP16234 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC6.06□□□□□ -1.44
PDGFRAP16234 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC6.06□□□□□ -1.44
PDGFRAP16234 PQLC2L-202ENST00000426338 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
PDGFRAP16234 MGAT2P2-201ENST00000427194 797 ntBASIC6.06□□□□□ -1.44
PDGFRAP16234 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC6.06□□□□□ -1.44
PDGFRAP16234 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC6.06□□□□□ -1.44
PDGFRAP16234 AC016724.1-201ENST00000453215 421 ntBASIC6.06□□□□□ -1.44
PDGFRAP16234 LINC01780-202ENST00000457683 391 ntTSL 3 BASIC6.06□□□□□ -1.44
PDGFRAP16234 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 78.6 ms