Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 AC005162.1-201ENST00000416513 389 ntTSL 5 BASIC6.22□□□□□ -1.41
TPM1P09493 AL513348.1-201ENST00000435554 440 ntTSL 3 BASIC6.22□□□□□ -1.41
TPM1P09493 AC023141.3-201ENST00000436698 278 ntBASIC6.22□□□□□ -1.41
TPM1P09493 PCBP2P1-201ENST00000437262 977 ntBASIC6.22□□□□□ -1.41
TPM1P09493 AL353662.1-201ENST00000439099 327 ntBASIC6.22□□□□□ -1.41
TPM1P09493 PA2G4P1-201ENST00000442248 1197 ntBASIC6.22□□□□□ -1.41
TPM1P09493 AP002856.1-201ENST00000447864 562 ntTSL 4 BASIC6.22□□□□□ -1.41
TPM1P09493 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC6.22□□□□□ -1.41
TPM1P09493 AC073486.1-202ENST00000458437 489 ntTSL 3 BASIC6.22□□□□□ -1.41
TPM1P09493 RN7SL254P-201ENST00000460609 284 ntBASIC6.22□□□□□ -1.41
TPM1P09493 AC023424.1-201ENST00000496058 459 ntBASIC6.22□□□□□ -1.41
TPM1P09493 SUMO2P4-201ENST00000504193 276 ntBASIC6.22□□□□□ -1.41
TPM1P09493 ENPP7P11-201ENST00000505915 627 ntBASIC6.22□□□□□ -1.41
TPM1P09493 AC139722.1-201ENST00000512502 782 ntTSL 3 BASIC6.22□□□□□ -1.41
TPM1P09493 SEPT10P1-201ENST00000517342 1162 ntBASIC6.22□□□□□ -1.41
TPM1P09493 TMEM97P2-201ENST00000517841 403 ntBASIC6.22□□□□□ -1.41
TPM1P09493 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC6.22□□□□□ -1.41
TPM1P09493 LINC02237-201ENST00000521753 805 ntTSL 3 BASIC6.22□□□□□ -1.41
TPM1P09493 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC6.22□□□□□ -1.41
TPM1P09493 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
TPM1P09493 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC6.22□□□□□ -1.41
TPM1P09493 AC068993.1-201ENST00000546724 589 ntBASIC6.22□□□□□ -1.41
TPM1P09493 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC6.22□□□□□ -1.41
TPM1P09493 AC091078.2-201ENST00000557145 559 ntBASIC6.22□□□□□ -1.41
TPM1P09493 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
TPM1P09493 DSG1-AS1-202ENST00000578477 588 ntTSL 3 BASIC6.22□□□□□ -1.41
TPM1P09493 DHFRP1-201ENST00000579682 559 ntBASIC6.22□□□□□ -1.41
TPM1P09493 MIR4701-201ENST00000583094 63 ntBASIC6.22□□□□□ -1.41
TPM1P09493 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC6.22□□□□□ -1.41
TPM1P09493 ZNF137P-202ENST00000597158 308 ntTSL 3 BASIC6.22□□□□□ -1.41
TPM1P09493 AL136131.3-201ENST00000607600 188 ntBASIC6.22□□□□□ -1.41
TPM1P09493 AC012676.3-201ENST00000614983 479 ntBASIC6.22□□□□□ -1.41
TPM1P09493 AC090607.5-201ENST00000615692 224 ntBASIC6.22□□□□□ -1.41
TPM1P09493 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC6.22□□□□□ -1.41
TPM1P09493 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
TPM1P09493 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
TPM1P09493 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
TPM1P09493 AC022306.1-201ENST00000560489 1562 ntBASIC6.22□□□□□ -1.41
TPM1P09493 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
TPM1P09493 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
TPM1P09493 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
TPM1P09493 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
TPM1P09493 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.41
TPM1P09493 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC6.21□□□□□ -1.41
TPM1P09493 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
TPM1P09493 AC079097.1-201ENST00000512187 1399 ntBASIC6.21□□□□□ -1.41
TPM1P09493 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC6.21□□□□□ -1.41
TPM1P09493 CDY11P-201ENST00000447168 1651 ntBASIC6.21□□□□□ -1.42
TPM1P09493 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC6.21□□□□□ -1.42
TPM1P09493 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
TPM1P09493 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC6.21□□□□□ -1.42
TPM1P09493 PTPRD-AS1-201ENST00000430766 1959 ntTSL 2 BASIC6.21□□□□□ -1.42
TPM1P09493 MIR130A-201ENST00000385274 89 ntBASIC6.21□□□□□ -1.42
TPM1P09493 AC005042.1-201ENST00000393397 800 ntBASIC6.21□□□□□ -1.42
TPM1P09493 EI24P3-201ENST00000399046 1062 ntBASIC6.21□□□□□ -1.42
TPM1P09493 AP001610.2-201ENST00000415820 422 ntTSL 3 BASIC6.21□□□□□ -1.42
TPM1P09493 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC6.21□□□□□ -1.42
TPM1P09493 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC6.21□□□□□ -1.42
TPM1P09493 AL022324.2-201ENST00000434827 780 ntBASIC6.21□□□□□ -1.42
TPM1P09493 RN7SL188P-201ENST00000469842 285 ntBASIC6.21□□□□□ -1.42
TPM1P09493 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC6.21□□□□□ -1.42
TPM1P09493 MTCO1P55-201ENST00000489829 745 ntBASIC6.21□□□□□ -1.42
TPM1P09493 AC018639.1-201ENST00000492994 442 ntBASIC6.21□□□□□ -1.42
TPM1P09493 HMGN1P17-201ENST00000513734 295 ntBASIC6.21□□□□□ -1.42
TPM1P09493 AC021733.2-201ENST00000518830 497 ntBASIC6.21□□□□□ -1.42
TPM1P09493 TPT1-AS1-207ENST00000520310 563 ntTSL 5 BASIC6.21□□□□□ -1.42
TPM1P09493 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC6.21□□□□□ -1.42
TPM1P09493 OR8A2P-201ENST00000528631 952 ntBASIC6.21□□□□□ -1.42
TPM1P09493 PMS2P3-207ENST00000529061 717 ntBASIC6.21□□□□□ -1.42
TPM1P09493 RERGL-202ENST00000536890 367 ntTSL 3 BASIC6.21□□□□□ -1.42
TPM1P09493 AC122688.1-201ENST00000541494 223 ntBASIC6.21□□□□□ -1.42
TPM1P09493 NMNAT1P5-201ENST00000559657 841 ntBASIC6.21□□□□□ -1.42
TPM1P09493 AGGF1P7-201ENST00000562369 913 ntBASIC6.21□□□□□ -1.42
TPM1P09493 C15orf41-204ENST00000562877 764 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
TPM1P09493 AC106730.2-201ENST00000566641 540 ntBASIC6.21□□□□□ -1.42
TPM1P09493 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC6.21□□□□□ -1.42
TPM1P09493 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
TPM1P09493 ARF4-AS1-203ENST00000607782 552 ntTSL 3 BASIC6.21□□□□□ -1.42
TPM1P09493 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
TPM1P09493 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC6.21□□□□□ -1.42
TPM1P09493 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC6.21□□□□□ -1.42
TPM1P09493 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
TPM1P09493 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
TPM1P09493 AC008627.1-201ENST00000517511 1704 ntBASIC6.21□□□□□ -1.42
TPM1P09493 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
TPM1P09493 ATP5A1P1-201ENST00000454088 1321 ntBASIC6.21□□□□□ -1.42
TPM1P09493 CYBRD1-203ENST00000409484 1493 ntTSL 2 BASIC6.21□□□□□ -1.42
TPM1P09493 UEVLD-202ENST00000320750 1799 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
TPM1P09493 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC6.21□□□□□ -1.42
TPM1P09493 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC6.2□□□□□ -1.42
TPM1P09493 AC083899.1-201ENST00000454465 3819 ntBASIC6.2□□□□□ -1.42
TPM1P09493 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
TPM1P09493 TRGV3-201ENST00000390346 537 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
TPM1P09493 RNA5SP198-201ENST00000410376 127 ntBASIC6.2□□□□□ -1.42
TPM1P09493 AC009965.1-201ENST00000411436 570 ntTSL 4 BASIC6.2□□□□□ -1.42
TPM1P09493 LINC01114-201ENST00000421071 482 ntTSL 3 BASIC6.2□□□□□ -1.42
TPM1P09493 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
TPM1P09493 IGBP1P3-201ENST00000447449 1000 ntBASIC6.2□□□□□ -1.42
TPM1P09493 AC135999.1-201ENST00000478962 479 ntBASIC6.2□□□□□ -1.42
TPM1P09493 SETP21-201ENST00000514799 892 ntBASIC6.2□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms