Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CTSDP07339 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CTSDP07339 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CTSDP07339 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC4.7□□□□□ -1.66
CTSDP07339 C3orf14-201ENST00000232519 690 ntAPPRIS P1 TSL 3 BASIC4.7□□□□□ -1.66
CTSDP07339 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
CTSDP07339 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CTSDP07339 MIR188-201ENST00000385034 86 ntBASIC4.7□□□□□ -1.66
CTSDP07339 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
CTSDP07339 RN7SKP108-201ENST00000411367 328 ntBASIC4.7□□□□□ -1.66
CTSDP07339 AL359885.1-201ENST00000415786 903 ntBASIC4.7□□□□□ -1.66
CTSDP07339 AL121878.1-201ENST00000418638 859 ntBASIC4.7□□□□□ -1.66
CTSDP07339 RIMKLBP2-201ENST00000424737 654 ntBASIC4.7□□□□□ -1.66
CTSDP07339 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC4.7□□□□□ -1.66
CTSDP07339 SUMO2P8-201ENST00000434672 286 ntBASIC4.7□□□□□ -1.66
CTSDP07339 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC4.7□□□□□ -1.66
CTSDP07339 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC4.7□□□□□ -1.66
CTSDP07339 RPL9P15-201ENST00000491096 532 ntBASIC4.7□□□□□ -1.66
CTSDP07339 EIF4E2P2-201ENST00000492033 736 ntBASIC4.7□□□□□ -1.66
CTSDP07339 RN7SL568P-201ENST00000493069 298 ntBASIC4.7□□□□□ -1.66
CTSDP07339 EIF3LP3-201ENST00000495197 822 ntBASIC4.7□□□□□ -1.66
CTSDP07339 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC4.7□□□□□ -1.66
CTSDP07339 AC108103.1-201ENST00000511286 446 ntBASIC4.7□□□□□ -1.66
CTSDP07339 AC098976.1-201ENST00000513014 541 ntBASIC4.7□□□□□ -1.66
CTSDP07339 RN7SKP253-201ENST00000516424 309 ntBASIC4.7□□□□□ -1.66
CTSDP07339 CASC19-203ENST00000523510 575 ntTSL 3 BASIC4.7□□□□□ -1.66
CTSDP07339 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC4.7□□□□□ -1.66
CTSDP07339 PMS2P3-207ENST00000529061 717 ntBASIC4.7□□□□□ -1.66
CTSDP07339 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CTSDP07339 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC4.7□□□□□ -1.66
CTSDP07339 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC4.7□□□□□ -1.66
CTSDP07339 AC018809.2-201ENST00000602436 3823 ntBASIC4.7□□□□□ -1.66
CTSDP07339 FAM72A-208ENST00000607379 1139 ntBASIC4.7□□□□□ -1.66
CTSDP07339 AC083798.2-201ENST00000608756 1152 ntTSL 4 BASIC4.7□□□□□ -1.66
CTSDP07339 AL135999.3-201ENST00000610501 812 ntBASIC4.7□□□□□ -1.66
CTSDP07339 AC026367.3-201ENST00000619032 590 ntBASIC4.7□□□□□ -1.66
CTSDP07339 FRG1EP-201ENST00000634469 770 ntBASIC4.7□□□□□ -1.66
CTSDP07339 AC012078.1-201ENST00000405035 1646 ntBASIC4.7□□□□□ -1.66
CTSDP07339 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
CTSDP07339 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CTSDP07339 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CTSDP07339 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CTSDP07339 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
CTSDP07339 AL359715.3-201ENST00000569267 2123 ntBASIC4.69□□□□□ -1.66
CTSDP07339 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CTSDP07339 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC4.69□□□□□ -1.66
CTSDP07339 AC007842.1-201ENST00000597336 2039 ntBASIC4.69□□□□□ -1.66
CTSDP07339 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC4.69□□□□□ -1.66
CTSDP07339 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CTSDP07339 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
CTSDP07339 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CTSDP07339 OR5B12-201ENST00000302572 1054 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
CTSDP07339 OR2L2-201ENST00000366479 1134 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
CTSDP07339 RNA5SP241-201ENST00000391326 114 ntBASIC4.69□□□□□ -1.66
CTSDP07339 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CTSDP07339 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC4.69□□□□□ -1.66
CTSDP07339 AC099782.1-201ENST00000425889 474 ntBASIC4.69□□□□□ -1.66
CTSDP07339 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC4.69□□□□□ -1.66
CTSDP07339 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC4.69□□□□□ -1.66
CTSDP07339 IGBP1P3-201ENST00000447449 1000 ntBASIC4.69□□□□□ -1.66
CTSDP07339 AP002453.1-201ENST00000492327 668 ntBASIC4.69□□□□□ -1.66
CTSDP07339 RN7SL362P-201ENST00000494228 267 ntBASIC4.69□□□□□ -1.66
CTSDP07339 GTF2IP11-201ENST00000526931 420 ntBASIC4.69□□□□□ -1.66
CTSDP07339 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC4.69□□□□□ -1.66
CTSDP07339 AC084880.3-201ENST00000535921 541 ntTSL 4 BASIC4.69□□□□□ -1.66
CTSDP07339 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC4.69□□□□□ -1.66
CTSDP07339 AP000593.3-201ENST00000546065 578 ntTSL 2 BASIC4.69□□□□□ -1.66
CTSDP07339 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC4.69□□□□□ -1.66
CTSDP07339 MRPS21P8-201ENST00000569196 235 ntBASIC4.69□□□□□ -1.66
CTSDP07339 AL078601.3-201ENST00000573303 535 ntBASIC4.69□□□□□ -1.66
CTSDP07339 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC4.69□□□□□ -1.66
CTSDP07339 RN7SL290P-201ENST00000578661 300 ntBASIC4.69□□□□□ -1.66
CTSDP07339 MIR4701-201ENST00000583094 63 ntBASIC4.69□□□□□ -1.66
CTSDP07339 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CTSDP07339 AL353684.1-201ENST00000622677 1120 ntBASIC4.69□□□□□ -1.66
CTSDP07339 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC4.69□□□□□ -1.66
CTSDP07339 TEX41-293ENST00000630451 690 ntTSL 5 BASIC4.69□□□□□ -1.66
CTSDP07339 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC4.69□□□□□ -1.66
CTSDP07339 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CTSDP07339 DDX6-207ENST00000617381 2883 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CTSDP07339 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CTSDP07339 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CTSDP07339 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CTSDP07339 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CTSDP07339 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CTSDP07339 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC4.68□□□□□ -1.66
CTSDP07339 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CTSDP07339 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC4.68□□□□□ -1.66
CTSDP07339 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CTSDP07339 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC4.68□□□□□ -1.66
CTSDP07339 EEF1A1P14-201ENST00000421195 1376 ntBASIC4.68□□□□□ -1.66
CTSDP07339 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CTSDP07339 OR14A16-202ENST00000641093 1367 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
CTSDP07339 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC4.68□□□□□ -1.66
CTSDP07339 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CTSDP07339 AC090181.3-201ENST00000624777 1514 ntBASIC4.68□□□□□ -1.66
CTSDP07339 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
CTSDP07339 LARS-201ENST00000274562 2213 ntTSL 2 BASIC4.68□□□□□ -1.66
CTSDP07339 AC003985.2-201ENST00000562268 1669 ntBASIC4.68□□□□□ -1.66
CTSDP07339 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC4.68□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 88.6 ms