Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC6.26□□□□□ -1.41
CHRNA1P02708 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
CHRNA1P02708 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC6.26□□□□□ -1.41
CHRNA1P02708 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC6.26□□□□□ -1.41
CHRNA1P02708 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC6.26□□□□□ -1.41
CHRNA1P02708 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
CHRNA1P02708 RPL32P9-201ENST00000487963 407 ntBASIC6.26□□□□□ -1.41
CHRNA1P02708 AC117386.2-203ENST00000489690 557 ntTSL 3 BASIC6.26□□□□□ -1.41
CHRNA1P02708 AC008953.1-201ENST00000497334 318 ntBASIC6.26□□□□□ -1.41
CHRNA1P02708 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
CHRNA1P02708 AC024558.1-201ENST00000505008 528 ntBASIC6.26□□□□□ -1.41
CHRNA1P02708 AC093763.2-201ENST00000505334 1223 ntBASIC6.26□□□□□ -1.41
CHRNA1P02708 OR5M14P-201ENST00000506803 618 ntBASIC6.26□□□□□ -1.41
CHRNA1P02708 MAL2-207ENST00000522828 603 ntTSL 3 BASIC6.26□□□□□ -1.41
CHRNA1P02708 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC6.26□□□□□ -1.41
CHRNA1P02708 OR4A6P-201ENST00000534364 970 ntBASIC6.26□□□□□ -1.41
CHRNA1P02708 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC6.26□□□□□ -1.41
CHRNA1P02708 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC6.26□□□□□ -1.41
CHRNA1P02708 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC6.26□□□□□ -1.41
CHRNA1P02708 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC6.26□□□□□ -1.41
CHRNA1P02708 AC125494.2-201ENST00000602431 657 ntBASIC6.26□□□□□ -1.41
CHRNA1P02708 AC092944.2-201ENST00000605443 889 ntBASIC6.26□□□□□ -1.41
CHRNA1P02708 Metazoa_SRP.172-201ENST00000621807 265 ntBASIC6.26□□□□□ -1.41
CHRNA1P02708 METTL15-211ENST00000634762 718 ntTSL 5 BASIC6.26□□□□□ -1.41
CHRNA1P02708 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
CHRNA1P02708 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
CHRNA1P02708 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
CHRNA1P02708 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
CHRNA1P02708 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC6.26□□□□□ -1.41
CHRNA1P02708 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC6.26□□□□□ -1.41
CHRNA1P02708 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
CHRNA1P02708 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
CHRNA1P02708 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC6.26□□□□□ -1.41
CHRNA1P02708 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
CHRNA1P02708 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
CHRNA1P02708 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC6.25□□□□□ -1.41
CHRNA1P02708 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
CHRNA1P02708 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC6.25□□□□□ -1.41
CHRNA1P02708 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC6.25□□□□□ -1.41
CHRNA1P02708 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC6.25□□□□□ -1.41
CHRNA1P02708 AC079753.1-201ENST00000623243 3868 ntBASIC6.25□□□□□ -1.41
CHRNA1P02708 CPS1-IT1-201ENST00000628368 2306 ntBASIC6.25□□□□□ -1.41
CHRNA1P02708 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
CHRNA1P02708 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
CHRNA1P02708 GAPDHP24-201ENST00000328713 983 ntBASIC6.25□□□□□ -1.41
CHRNA1P02708 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC6.25□□□□□ -1.41
CHRNA1P02708 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC6.25□□□□□ -1.41
CHRNA1P02708 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC6.25□□□□□ -1.41
CHRNA1P02708 RNU1-88P-201ENST00000459274 128 ntBASIC6.25□□□□□ -1.41
CHRNA1P02708 RN7SL583P-201ENST00000475692 287 ntBASIC6.25□□□□□ -1.41
CHRNA1P02708 OR2AO1P-201ENST00000476497 403 ntBASIC6.25□□□□□ -1.41
CHRNA1P02708 AC090638.1-201ENST00000498296 909 ntBASIC6.25□□□□□ -1.41
CHRNA1P02708 AC104126.1-201ENST00000504004 711 ntTSL 3 BASIC6.25□□□□□ -1.41
CHRNA1P02708 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC6.25□□□□□ -1.41
CHRNA1P02708 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC6.25□□□□□ -1.41
CHRNA1P02708 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC6.25□□□□□ -1.41
CHRNA1P02708 AC126615.2-201ENST00000553003 515 ntBASIC6.25□□□□□ -1.41
CHRNA1P02708 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC6.25□□□□□ -1.41
CHRNA1P02708 AC044860.2-201ENST00000561005 179 ntBASIC6.25□□□□□ -1.41
CHRNA1P02708 AC007346.2-201ENST00000564816 892 ntBASIC6.25□□□□□ -1.41
CHRNA1P02708 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
CHRNA1P02708 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC6.25□□□□□ -1.41
CHRNA1P02708 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC6.25□□□□□ -1.41
CHRNA1P02708 BNIP3P32-201ENST00000600015 554 ntBASIC6.25□□□□□ -1.41
CHRNA1P02708 AL352984.2-202ENST00000613699 155 ntBASIC6.25□□□□□ -1.41
CHRNA1P02708 AC132068.1-201ENST00000623805 459 ntBASIC6.25□□□□□ -1.41
CHRNA1P02708 AC136428.4-201ENST00000634254 1155 ntBASIC6.25□□□□□ -1.41
CHRNA1P02708 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC6.25□□□□□ -1.41
CHRNA1P02708 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC6.25□□□□□ -1.41
CHRNA1P02708 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
CHRNA1P02708 HSPD1P8-201ENST00000400121 1658 ntBASIC6.25□□□□□ -1.41
CHRNA1P02708 MPDZ-202ENST00000319217 7722 ntAPPRIS ALT2 TSL 5 BASIC6.25□□□□□ -1.41
CHRNA1P02708 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC6.25□□□□□ -1.41
CHRNA1P02708 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
CHRNA1P02708 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC6.25□□□□□ -1.41
CHRNA1P02708 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
CHRNA1P02708 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC6.25□□□□□ -1.41
CHRNA1P02708 DNHD1-212ENST00000527990 14298 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
CHRNA1P02708 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC6.24□□□□□ -1.41
CHRNA1P02708 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
CHRNA1P02708 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
CHRNA1P02708 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
CHRNA1P02708 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
CHRNA1P02708 AL592429.1-201ENST00000403909 1473 ntBASIC6.24□□□□□ -1.41
CHRNA1P02708 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
CHRNA1P02708 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
CHRNA1P02708 RNA5SP319-201ENST00000362768 119 ntBASIC6.24□□□□□ -1.41
CHRNA1P02708 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC6.24□□□□□ -1.41
CHRNA1P02708 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC6.24□□□□□ -1.41
CHRNA1P02708 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC6.24□□□□□ -1.41
CHRNA1P02708 AC096775.1-201ENST00000437724 448 ntBASIC6.24□□□□□ -1.41
CHRNA1P02708 PTMAP6-201ENST00000439110 327 ntBASIC6.24□□□□□ -1.41
CHRNA1P02708 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC6.24□□□□□ -1.41
CHRNA1P02708 AC006539.1-201ENST00000481419 501 ntBASIC6.24□□□□□ -1.41
CHRNA1P02708 RPS4XP1-201ENST00000482189 787 ntBASIC6.24□□□□□ -1.41
CHRNA1P02708 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC6.24□□□□□ -1.41
CHRNA1P02708 AC006499.3-201ENST00000506077 748 ntBASIC6.24□□□□□ -1.41
CHRNA1P02708 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC6.24□□□□□ -1.41
CHRNA1P02708 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC6.24□□□□□ -1.41
CHRNA1P02708 AP003080.1-202ENST00000526526 915 ntBASIC6.24□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 123.6 ms