Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
APOEP02649 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
APOEP02649 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
APOEP02649 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC6.02□□□□□ -1.45
APOEP02649 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC6.02□□□□□ -1.45
APOEP02649 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC6.02□□□□□ -1.45
APOEP02649 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
APOEP02649 ANAPC10-201ENST00000309439 868 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
APOEP02649 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
APOEP02649 U3.10-201ENST00000364459 214 ntBASIC6.02□□□□□ -1.45
APOEP02649 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC6.02□□□□□ -1.45
APOEP02649 SNORA11.3-201ENST00000408471 128 ntBASIC6.02□□□□□ -1.45
APOEP02649 RPL5P2-201ENST00000429598 854 ntBASIC6.02□□□□□ -1.45
APOEP02649 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC6.02□□□□□ -1.45
APOEP02649 RPL23AP19-201ENST00000436229 369 ntBASIC6.02□□□□□ -1.45
APOEP02649 AC073109.1-201ENST00000445066 978 ntBASIC6.02□□□□□ -1.45
APOEP02649 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC6.02□□□□□ -1.45
APOEP02649 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC6.02□□□□□ -1.45
APOEP02649 AC006539.1-201ENST00000481419 501 ntBASIC6.02□□□□□ -1.45
APOEP02649 AC022215.1-201ENST00000481770 362 ntBASIC6.02□□□□□ -1.45
APOEP02649 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
APOEP02649 AC022826.1-201ENST00000519383 805 ntBASIC6.02□□□□□ -1.45
APOEP02649 AC078899.1-201ENST00000521432 1185 ntBASIC6.02□□□□□ -1.45
APOEP02649 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
APOEP02649 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC6.02□□□□□ -1.45
APOEP02649 SETP3-201ENST00000581726 813 ntBASIC6.02□□□□□ -1.45
APOEP02649 AC015802.2-201ENST00000589690 189 ntBASIC6.02□□□□□ -1.45
APOEP02649 AC027243.2-201ENST00000602530 724 ntBASIC6.02□□□□□ -1.45
APOEP02649 AC025857.2-201ENST00000602711 238 ntBASIC6.02□□□□□ -1.45
APOEP02649 SNORA11.6-201ENST00000619030 128 ntBASIC6.02□□□□□ -1.45
APOEP02649 AC138907.8-201ENST00000623981 2256 ntBASIC6.02□□□□□ -1.45
APOEP02649 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC6.02□□□□□ -1.45
APOEP02649 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC6.02□□□□□ -1.45
APOEP02649 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
APOEP02649 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
APOEP02649 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC6.02□□□□□ -1.45
APOEP02649 BPIFC-201ENST00000300399 1980 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
APOEP02649 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC6.02□□□□□ -1.45
APOEP02649 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
APOEP02649 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC6.01□□□□□ -1.45
APOEP02649 AC023632.6-201ENST00000624338 2177 ntBASIC6.01□□□□□ -1.45
APOEP02649 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
APOEP02649 AC117409.1-201ENST00000470499 1310 ntBASIC6.01□□□□□ -1.45
APOEP02649 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
APOEP02649 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC6.01□□□□□ -1.45
APOEP02649 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC6.01□□□□□ -1.45
APOEP02649 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC6.01□□□□□ -1.45
APOEP02649 ZNF214-204ENST00000536068 2562 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
APOEP02649 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC6.01□□□□□ -1.45
APOEP02649 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC6.01□□□□□ -1.45
APOEP02649 AL357752.1-201ENST00000412817 349 ntBASIC6.01□□□□□ -1.45
APOEP02649 AC009506.2-201ENST00000420635 840 ntBASIC6.01□□□□□ -1.45
APOEP02649 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC6.01□□□□□ -1.45
APOEP02649 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC6.01□□□□□ -1.45
APOEP02649 AC004129.2-201ENST00000457229 287 ntBASIC6.01□□□□□ -1.45
APOEP02649 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
APOEP02649 NDUFB2-210ENST00000475276 539 ntTSL 4 BASIC6.01□□□□□ -1.45
APOEP02649 AC105384.2-201ENST00000508433 640 ntBASIC6.01□□□□□ -1.45
APOEP02649 LIAS-205ENST00000509519 1005 ntTSL 2 BASIC6.01□□□□□ -1.45
APOEP02649 SCARNA6.1-201ENST00000516989 238 ntBASIC6.01□□□□□ -1.45
APOEP02649 AC136777.2-201ENST00000522979 358 ntBASIC6.01□□□□□ -1.45
APOEP02649 IGLV3-30-201ENST00000524362 298 ntBASIC6.01□□□□□ -1.45
APOEP02649 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC6.01□□□□□ -1.45
APOEP02649 CCDC60-203ENST00000536742 886 ntAPPRIS ALT2 TSL 2 BASIC6.01□□□□□ -1.45
APOEP02649 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC6.01□□□□□ -1.45
APOEP02649 AL163952.1-202ENST00000569625 600 ntBASIC6.01□□□□□ -1.45
APOEP02649 TMSB15B-207ENST00000598087 947 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
APOEP02649 ASNSD1-208ENST00000607690 535 ntTSL 2 BASIC6.01□□□□□ -1.45
APOEP02649 AP005431.1-201ENST00000618479 319 ntBASIC6.01□□□□□ -1.45
APOEP02649 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC6.01□□□□□ -1.45
APOEP02649 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC6.01□□□□□ -1.45
APOEP02649 UGP2-232ENST00000640075 567 ntTSL 5 BASIC6.01□□□□□ -1.45
APOEP02649 AC087565.3-203ENST00000641018 837 ntBASIC6.01□□□□□ -1.45
APOEP02649 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
APOEP02649 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC6.01□□□□□ -1.45
APOEP02649 AC010266.2-201ENST00000564741 3255 ntBASIC6.01□□□□□ -1.45
APOEP02649 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
APOEP02649 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
APOEP02649 MFSD8-219ENST00000641228 2559 ntBASIC6.01□□□□□ -1.45
APOEP02649 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC6.01□□□□□ -1.45
APOEP02649 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
APOEP02649 AC006484.1-201ENST00000435086 1884 ntBASIC6□□□□□ -1.45
APOEP02649 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
APOEP02649 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC6□□□□□ -1.45
APOEP02649 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC6□□□□□ -1.45
APOEP02649 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC6□□□□□ -1.45
APOEP02649 AP000473.2-201ENST00000602659 1537 ntBASIC6□□□□□ -1.45
APOEP02649 BCORP1-203ENST00000513194 5093 ntBASIC6□□□□□ -1.45
APOEP02649 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC6□□□□□ -1.45
APOEP02649 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC6□□□□□ -1.45
APOEP02649 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC6□□□□□ -1.45
APOEP02649 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC6□□□□□ -1.45
APOEP02649 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
APOEP02649 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC6□□□□□ -1.45
APOEP02649 MIR133A2-201ENST00000347538 102 ntBASIC6□□□□□ -1.45
APOEP02649 METTL15P3-201ENST00000415522 1221 ntBASIC6□□□□□ -1.45
APOEP02649 AC017078.1-201ENST00000416146 368 ntBASIC6□□□□□ -1.45
APOEP02649 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC6□□□□□ -1.45
APOEP02649 BX119321.1-201ENST00000428912 797 ntBASIC6□□□□□ -1.45
APOEP02649 AL022331.1-201ENST00000429025 477 ntBASIC6□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 93.6 ms