Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 AC092865.3-201ENST00000425390 1026 ntBASIC4.49□□□□□ -1.69
SSSCA1O60232 AC244453.3-201ENST00000426275 459 ntTSL 5 BASIC4.49□□□□□ -1.69
SSSCA1O60232 AC007679.3-201ENST00000434035 414 ntBASIC4.49□□□□□ -1.69
SSSCA1O60232 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC4.49□□□□□ -1.69
SSSCA1O60232 GEMIN2P1-201ENST00000454246 752 ntBASIC4.49□□□□□ -1.69
SSSCA1O60232 RN7SL570P-201ENST00000484405 292 ntBASIC4.49□□□□□ -1.69
SSSCA1O60232 IGBP1P4-201ENST00000503202 879 ntBASIC4.49□□□□□ -1.69
SSSCA1O60232 AC108103.1-201ENST00000511286 446 ntBASIC4.49□□□□□ -1.69
SSSCA1O60232 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC4.49□□□□□ -1.69
SSSCA1O60232 AC104248.1-201ENST00000522244 481 ntTSL 3 BASIC4.49□□□□□ -1.69
SSSCA1O60232 AC130364.2-201ENST00000528639 604 ntBASIC4.49□□□□□ -1.69
SSSCA1O60232 AC013652.2-202ENST00000558948 910 ntTSL 3 BASIC4.49□□□□□ -1.69
SSSCA1O60232 AC092376.1-201ENST00000569677 335 ntTSL 2 BASIC4.49□□□□□ -1.69
SSSCA1O60232 CASC22-201ENST00000569713 386 ntTSL 5 BASIC4.49□□□□□ -1.69
SSSCA1O60232 MTCYBP13-201ENST00000578634 1093 ntBASIC4.49□□□□□ -1.69
SSSCA1O60232 TTC39C-AS1-201ENST00000579713 817 ntTSL 5 BASIC4.49□□□□□ -1.69
SSSCA1O60232 MIR4311-201ENST00000580794 100 ntBASIC4.49□□□□□ -1.69
SSSCA1O60232 AP005119.1-201ENST00000580956 292 ntBASIC4.49□□□□□ -1.69
SSSCA1O60232 MIR4701-201ENST00000583094 63 ntBASIC4.49□□□□□ -1.69
SSSCA1O60232 AC005180.2-201ENST00000585620 562 ntTSL 3 BASIC4.49□□□□□ -1.69
SSSCA1O60232 ZNF137P-202ENST00000597158 308 ntTSL 3 BASIC4.49□□□□□ -1.69
SSSCA1O60232 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
SSSCA1O60232 IGKV2OR2-7D-201ENST00000603664 304 ntBASIC4.49□□□□□ -1.69
SSSCA1O60232 AL591222.2-201ENST00000604443 754 ntBASIC4.49□□□□□ -1.69
SSSCA1O60232 IGKV2OR2-7-201ENST00000604652 304 ntBASIC4.49□□□□□ -1.69
SSSCA1O60232 OR51C1P-201ENST00000608504 942 ntBASIC4.49□□□□□ -1.69
SSSCA1O60232 AC073389.3-201ENST00000609434 935 ntBASIC4.49□□□□□ -1.69
SSSCA1O60232 MIR6070-201ENST00000613967 103 ntBASIC4.49□□□□□ -1.69
SSSCA1O60232 AC015574.1-202ENST00000616588 456 ntTSL 5 BASIC4.49□□□□□ -1.69
SSSCA1O60232 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
SSSCA1O60232 AC241377.1-201ENST00000619797 406 ntBASIC4.49□□□□□ -1.69
SSSCA1O60232 AC211486.4-201ENST00000621495 113 ntBASIC4.49□□□□□ -1.69
SSSCA1O60232 AC010325.3-201ENST00000641084 394 ntBASIC4.49□□□□□ -1.69
SSSCA1O60232 AL078595.2-201ENST00000605309 1780 ntBASIC4.49□□□□□ -1.69
SSSCA1O60232 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
SSSCA1O60232 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
SSSCA1O60232 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
SSSCA1O60232 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
SSSCA1O60232 MS4A7-211ENST00000534016 1378 ntTSL 2 BASIC4.49□□□□□ -1.69
SSSCA1O60232 TRIM51GP-201ENST00000534741 1350 ntBASIC4.49□□□□□ -1.69
SSSCA1O60232 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
SSSCA1O60232 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
SSSCA1O60232 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC4.49□□□□□ -1.69
SSSCA1O60232 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC4.49□□□□□ -1.69
SSSCA1O60232 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
SSSCA1O60232 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
SSSCA1O60232 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
SSSCA1O60232 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC4.49□□□□□ -1.69
SSSCA1O60232 MGC4859-201ENST00000634803 3118 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
SSSCA1O60232 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC4.48□□□□□ -1.69
SSSCA1O60232 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
SSSCA1O60232 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC4.48□□□□□ -1.69
SSSCA1O60232 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
SSSCA1O60232 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
SSSCA1O60232 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
SSSCA1O60232 CLC-201ENST00000221804 635 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
SSSCA1O60232 GAPDHP24-201ENST00000328713 983 ntBASIC4.48□□□□□ -1.69
SSSCA1O60232 TP63-205ENST00000392461 1251 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
SSSCA1O60232 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC4.48□□□□□ -1.69
SSSCA1O60232 MEAF6P1-201ENST00000416092 327 ntBASIC4.48□□□□□ -1.69
SSSCA1O60232 AC007966.1-201ENST00000421998 1179 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
SSSCA1O60232 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC4.48□□□□□ -1.69
SSSCA1O60232 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC4.48□□□□□ -1.69
SSSCA1O60232 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
SSSCA1O60232 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC4.48□□□□□ -1.69
SSSCA1O60232 LHFPL3-AS1-204ENST00000433514 748 ntTSL 2 BASIC4.48□□□□□ -1.69
SSSCA1O60232 TUBB4BP6-201ENST00000437576 479 ntBASIC4.48□□□□□ -1.69
SSSCA1O60232 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC4.48□□□□□ -1.69
SSSCA1O60232 RPL32P33-201ENST00000487023 394 ntBASIC4.48□□□□□ -1.69
SSSCA1O60232 CRNDE-201ENST00000501177 614 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
SSSCA1O60232 DUTP7-201ENST00000507982 486 ntBASIC4.48□□□□□ -1.69
SSSCA1O60232 HMGN1P16-201ENST00000508308 283 ntBASIC4.48□□□□□ -1.69
SSSCA1O60232 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC4.48□□□□□ -1.69
SSSCA1O60232 AL035458.2-201ENST00000512005 478 ntTSL 3 BASIC4.48□□□□□ -1.69
SSSCA1O60232 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC4.48□□□□□ -1.69
SSSCA1O60232 ZFAND1-204ENST00000517588 633 ntTSL 2 BASIC4.48□□□□□ -1.69
SSSCA1O60232 TMEM97P2-201ENST00000517841 403 ntBASIC4.48□□□□□ -1.69
SSSCA1O60232 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC4.48□□□□□ -1.69
SSSCA1O60232 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC4.48□□□□□ -1.69
SSSCA1O60232 IGLV3-30-201ENST00000524362 298 ntBASIC4.48□□□□□ -1.69
SSSCA1O60232 AC013549.3-201ENST00000528792 419 ntTSL 3 BASIC4.48□□□□□ -1.69
SSSCA1O60232 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC4.48□□□□□ -1.69
SSSCA1O60232 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
SSSCA1O60232 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC4.48□□□□□ -1.69
SSSCA1O60232 SNURF-202ENST00000577949 650 ntAPPRIS P1 TSL 2 BASIC4.48□□□□□ -1.69
SSSCA1O60232 MIR4776-2-201ENST00000580204 80 ntBASIC4.48□□□□□ -1.69
SSSCA1O60232 H3F3BP2-201ENST00000583907 357 ntBASIC4.48□□□□□ -1.69
SSSCA1O60232 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC4.48□□□□□ -1.69
SSSCA1O60232 AL117336.3-201ENST00000603160 1107 ntTSL 3 BASIC4.48□□□□□ -1.69
SSSCA1O60232 LINC02112-203ENST00000606169 419 ntTSL 5 BASIC4.48□□□□□ -1.69
SSSCA1O60232 AL136131.3-201ENST00000607600 188 ntBASIC4.48□□□□□ -1.69
SSSCA1O60232 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC4.48□□□□□ -1.69
SSSCA1O60232 AL135999.3-201ENST00000610501 812 ntBASIC4.48□□□□□ -1.69
SSSCA1O60232 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
SSSCA1O60232 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC4.48□□□□□ -1.69
SSSCA1O60232 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC4.48□□□□□ -1.69
SSSCA1O60232 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC4.48□□□□□ -1.69
SSSCA1O60232 AL136228.1-201ENST00000622221 319 ntBASIC4.48□□□□□ -1.69
SSSCA1O60232 AL353684.1-201ENST00000622677 1120 ntBASIC4.48□□□□□ -1.69
SSSCA1O60232 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms