Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC7.47□□□□□ -1.21
PCDHGA11Q9Y5H2 AC010327.2-201ENST00000587647 488 ntBASIC7.47□□□□□ -1.21
PCDHGA11Q9Y5H2 DTNA-220ENST00000590831 847 ntTSL 2 BASIC7.47□□□□□ -1.21
PCDHGA11Q9Y5H2 RPL23AP90-201ENST00000603820 236 ntBASIC7.47□□□□□ -1.21
PCDHGA11Q9Y5H2 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC7.47□□□□□ -1.21
PCDHGA11Q9Y5H2 NUDT13-208ENST00000617744 928 ntTSL 5 BASIC7.47□□□□□ -1.21
PCDHGA11Q9Y5H2 FER-210ENST00000628534 558 ntTSL 5 BASIC7.47□□□□□ -1.21
PCDHGA11Q9Y5H2 AC010653.3-201ENST00000635332 232 ntBASIC7.47□□□□□ -1.21
PCDHGA11Q9Y5H2 Metazoa_SRP.212-201ENST00000636778 248 ntBASIC7.47□□□□□ -1.21
PCDHGA11Q9Y5H2 AC087885.1-201ENST00000641910 848 ntBASIC7.47□□□□□ -1.21
PCDHGA11Q9Y5H2 ZNF587B-201ENST00000442832 3339 ntTSL 2 BASIC7.47□□□□□ -1.21
PCDHGA11Q9Y5H2 WDPCP-204ENST00000409199 2466 ntTSL 2 BASIC7.47□□□□□ -1.21
PCDHGA11Q9Y5H2 NAV2-202ENST00000360655 10667 ntAPPRIS ALT2 TSL 1 (best) BASIC7.47□□□□□ -1.21
PCDHGA11Q9Y5H2 ASNSP6-201ENST00000592770 1618 ntBASIC7.47□□□□□ -1.21
PCDHGA11Q9Y5H2 LINC02466-201ENST00000500092 1963 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
PCDHGA11Q9Y5H2 RUNX1T1-205ENST00000436581 7454 ntTSL 5 BASIC7.47□□□□□ -1.21
PCDHGA11Q9Y5H2 LINC02203-204ENST00000628444 2323 ntTSL 2 BASIC7.47□□□□□ -1.21
PCDHGA11Q9Y5H2 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
PCDHGA11Q9Y5H2 DLG2-230ENST00000532653 2891 ntAPPRIS ALT2 TSL 1 (best) BASIC7.47□□□□□ -1.21
PCDHGA11Q9Y5H2 DAZ3-201ENST00000315357 3277 ntAPPRIS ALT2 TSL 1 (best) BASIC7.47□□□□□ -1.21
PCDHGA11Q9Y5H2 DAZ2-201ENST00000382294 3277 ntAPPRIS ALT2 TSL 5 BASIC7.47□□□□□ -1.21
PCDHGA11Q9Y5H2 DAZ4-204ENST00000415508 3277 ntTSL 5 BASIC7.47□□□□□ -1.21
PCDHGA11Q9Y5H2 ALG13-202ENST00000371979 2770 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
PCDHGA11Q9Y5H2 RNF219-201ENST00000282003 3529 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
PCDHGA11Q9Y5H2 OR51E2-203ENST00000641638 2626 ntAPPRIS P1 BASIC7.47□□□□□ -1.21
PCDHGA11Q9Y5H2 AC015689.2-201ENST00000528172 1738 ntBASIC7.47□□□□□ -1.21
PCDHGA11Q9Y5H2 GON4L-204ENST00000437809 7713 ntAPPRIS P3 TSL 5 BASIC7.47□□□□□ -1.21
PCDHGA11Q9Y5H2 MYLK-206ENST00000418370 7282 ntTSL 1 (best) BASIC7.46□□□□□ -1.21
PCDHGA11Q9Y5H2 ROBO1-202ENST00000464233 6742 ntAPPRIS ALT2 TSL 5 BASIC7.46□□□□□ -1.21
PCDHGA11Q9Y5H2 SLC24A1-209ENST00000537259 3983 ntAPPRIS ALT2 TSL 2 BASIC7.46□□□□□ -1.21
PCDHGA11Q9Y5H2 MEIS1-209ENST00000488550 5111 ntAPPRIS ALT1 TSL 1 (best) BASIC7.46□□□□□ -1.21
PCDHGA11Q9Y5H2 NCALD-203ENST00000395923 3808 ntAPPRIS P1 TSL 5 BASIC7.46□□□□□ -1.21
PCDHGA11Q9Y5H2 UBE2V1-201ENST00000340309 2536 ntTSL 1 (best) BASIC7.46□□□□□ -1.21
PCDHGA11Q9Y5H2 RNASEL-201ENST00000367559 4238 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.21
PCDHGA11Q9Y5H2 CD86-202ENST00000330540 2708 ntAPPRIS P3 TSL 1 (best) BASIC7.46□□□□□ -1.21
PCDHGA11Q9Y5H2 SLC4A8-203ENST00000453097 11824 ntAPPRIS P3 TSL 1 (best) BASIC7.46□□□□□ -1.21
PCDHGA11Q9Y5H2 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC7.46□□□□□ -1.21
PCDHGA11Q9Y5H2 CCDC162P-202ENST00000368966 6751 ntBASIC7.46□□□□□ -1.21
PCDHGA11Q9Y5H2 BMS1-201ENST00000374518 7753 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.21
PCDHGA11Q9Y5H2 ATR-201ENST00000350721 8249 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
PCDHGA11Q9Y5H2 LEPR-203ENST00000371058 2805 ntTSL 5 BASIC7.46□□□□□ -1.22
PCDHGA11Q9Y5H2 ANKS1B-201ENST00000329257 996 ntTSL 5 BASIC7.46□□□□□ -1.22
PCDHGA11Q9Y5H2 RN7SKP50-201ENST00000364694 315 ntBASIC7.46□□□□□ -1.22
PCDHGA11Q9Y5H2 OR2T4-201ENST00000366473 963 ntAPPRIS P1 BASIC7.46□□□□□ -1.22
PCDHGA11Q9Y5H2 OR2T4-202ENST00000366475 1047 ntBASIC7.46□□□□□ -1.22
PCDHGA11Q9Y5H2 EEF1AKMT1-201ENST00000382754 875 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
PCDHGA11Q9Y5H2 AC109780.2-201ENST00000413467 845 ntBASIC7.46□□□□□ -1.22
PCDHGA11Q9Y5H2 OR10U1P-201ENST00000414690 905 ntBASIC7.46□□□□□ -1.22
PCDHGA11Q9Y5H2 AC008937.2-201ENST00000415589 619 ntTSL 3 BASIC7.46□□□□□ -1.22
PCDHGA11Q9Y5H2 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC7.46□□□□□ -1.22
PCDHGA11Q9Y5H2 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC7.46□□□□□ -1.22
PCDHGA11Q9Y5H2 AC004160.2-201ENST00000425837 563 ntTSL 4 BASIC7.46□□□□□ -1.22
PCDHGA11Q9Y5H2 AL954705.1-201ENST00000435277 559 ntBASIC7.46□□□□□ -1.22
PCDHGA11Q9Y5H2 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC7.46□□□□□ -1.22
PCDHGA11Q9Y5H2 AL022238.1-201ENST00000442557 355 ntBASIC7.46□□□□□ -1.22
PCDHGA11Q9Y5H2 AL161454.1-201ENST00000446226 569 ntBASIC7.46□□□□□ -1.22
PCDHGA11Q9Y5H2 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC7.46□□□□□ -1.22
PCDHGA11Q9Y5H2 SYNPR-208ENST00000472899 527 ntTSL 4 BASIC7.46□□□□□ -1.22
PCDHGA11Q9Y5H2 AL928654.1-201ENST00000476081 354 ntBASIC7.46□□□□□ -1.22
PCDHGA11Q9Y5H2 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC7.46□□□□□ -1.22
PCDHGA11Q9Y5H2 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC7.46□□□□□ -1.22
PCDHGA11Q9Y5H2 MTCO2P4-201ENST00000517968 247 ntBASIC7.46□□□□□ -1.22
PCDHGA11Q9Y5H2 LACTB2-AS1-203ENST00000518553 817 ntTSL 5 BASIC7.46□□□□□ -1.22
PCDHGA11Q9Y5H2 AC084251.1-201ENST00000521867 382 ntBASIC7.46□□□□□ -1.22
PCDHGA11Q9Y5H2 SLN-202ENST00000525934 436 ntAPPRIS P1 TSL 3 BASIC7.46□□□□□ -1.22
PCDHGA11Q9Y5H2 AP003032.2-201ENST00000533697 686 ntTSL 3 BASIC7.46□□□□□ -1.22
PCDHGA11Q9Y5H2 RASSF8-AS1-204ENST00000535436 1121 ntTSL 4 BASIC7.46□□□□□ -1.22
PCDHGA11Q9Y5H2 AC079313.2-201ENST00000550474 564 ntTSL 4 BASIC7.46□□□□□ -1.22
PCDHGA11Q9Y5H2 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC7.46□□□□□ -1.22
PCDHGA11Q9Y5H2 ULK4P2-202ENST00000564187 492 ntBASIC7.46□□□□□ -1.22
PCDHGA11Q9Y5H2 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC7.46□□□□□ -1.22
PCDHGA11Q9Y5H2 AC009171.1-201ENST00000572673 266 ntBASIC7.46□□□□□ -1.22
PCDHGA11Q9Y5H2 MTCO3P13-201ENST00000577757 781 ntBASIC7.46□□□□□ -1.22
PCDHGA11Q9Y5H2 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
PCDHGA11Q9Y5H2 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
PCDHGA11Q9Y5H2 CT45A7-201ENST00000610598 996 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
PCDHGA11Q9Y5H2 MIR6872-201ENST00000612981 62 ntBASIC7.46□□□□□ -1.22
PCDHGA11Q9Y5H2 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC7.46□□□□□ -1.22
PCDHGA11Q9Y5H2 Metazoa_SRP.42-201ENST00000621081 348 ntBASIC7.46□□□□□ -1.22
PCDHGA11Q9Y5H2 GSTTP1-204ENST00000621179 920 ntAPPRIS P1 TSL 5 BASIC7.46□□□□□ -1.22
PCDHGA11Q9Y5H2 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC7.46□□□□□ -1.22
PCDHGA11Q9Y5H2 LINC01142-201ENST00000440404 1457 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
PCDHGA11Q9Y5H2 LDB2-216ENST00000515064 2295 ntAPPRIS ALT1 TSL 2 BASIC7.46□□□□□ -1.22
PCDHGA11Q9Y5H2 PKP4-AS1-201ENST00000342892 4067 ntTSL 2 BASIC7.46□□□□□ -1.22
PCDHGA11Q9Y5H2 UBAP2-204ENST00000379238 4289 ntAPPRIS P1 TSL 5 BASIC7.46□□□□□ -1.22
PCDHGA11Q9Y5H2 NUCB2-201ENST00000323688 1905 ntAPPRIS ALT1 TSL 2 BASIC7.46□□□□□ -1.22
PCDHGA11Q9Y5H2 OR5BR1P-201ENST00000524992 1330 ntBASIC7.46□□□□□ -1.22
PCDHGA11Q9Y5H2 IL2RA-203ENST00000379959 3176 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
PCDHGA11Q9Y5H2 A2M-201ENST00000318602 4844 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
PCDHGA11Q9Y5H2 ZNF385B-202ENST00000409343 2750 ntTSL 2 BASIC7.46□□□□□ -1.22
PCDHGA11Q9Y5H2 TFG-204ENST00000476228 1783 ntAPPRIS ALT1 TSL 1 (best) BASIC7.46□□□□□ -1.22
PCDHGA11Q9Y5H2 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC7.46□□□□□ -1.22
PCDHGA11Q9Y5H2 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
PCDHGA11Q9Y5H2 MTFR1L-207ENST00000466284 3262 ntTSL 2 BASIC7.46□□□□□ -1.22
PCDHGA11Q9Y5H2 MFAP3L-203ENST00000393704 5827 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
PCDHGA11Q9Y5H2 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC7.45□□□□□ -1.22
PCDHGA11Q9Y5H2 CASC19-260ENST00000641828 2001 ntBASIC7.45□□□□□ -1.22
PCDHGA11Q9Y5H2 TXNIP-204ENST00000582401 2926 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
PCDHGA11Q9Y5H2 C7orf31-202ENST00000409280 3357 ntAPPRIS P1 TSL 2 BASIC7.45□□□□□ -1.22
PCDHGA11Q9Y5H2 DUBR-202ENST00000466734 2737 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 105.6 ms