Protein–RNA interactions for Protein: Q9Y4P1

ATG4B, Cysteine protease ATG4B, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4BQ9Y4P1 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
ATG4BQ9Y4P1 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
ATG4BQ9Y4P1 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC5.5□□□□□ -1.53
ATG4BQ9Y4P1 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
ATG4BQ9Y4P1 RNU1-150P-201ENST00000362491 162 ntBASIC5.5□□□□□ -1.53
ATG4BQ9Y4P1 MIR1203-201ENST00000408812 85 ntBASIC5.5□□□□□ -1.53
ATG4BQ9Y4P1 SLC20A1P1-201ENST00000413906 956 ntBASIC5.5□□□□□ -1.53
ATG4BQ9Y4P1 MRPL53P1-201ENST00000414323 319 ntBASIC5.5□□□□□ -1.53
ATG4BQ9Y4P1 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC5.5□□□□□ -1.53
ATG4BQ9Y4P1 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC5.5□□□□□ -1.53
ATG4BQ9Y4P1 RPS3P2-201ENST00000421346 701 ntBASIC5.5□□□□□ -1.53
ATG4BQ9Y4P1 CRIP1P1-201ENST00000427567 185 ntBASIC5.5□□□□□ -1.53
ATG4BQ9Y4P1 RPS29P14-201ENST00000431518 171 ntBASIC5.5□□□□□ -1.53
ATG4BQ9Y4P1 AL389925.1-201ENST00000432257 728 ntBASIC5.5□□□□□ -1.53
ATG4BQ9Y4P1 MTND4LP12-201ENST00000448237 295 ntBASIC5.5□□□□□ -1.53
ATG4BQ9Y4P1 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
ATG4BQ9Y4P1 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC5.5□□□□□ -1.53
ATG4BQ9Y4P1 TRBV8-1-201ENST00000481590 279 ntBASIC5.5□□□□□ -1.53
ATG4BQ9Y4P1 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC5.5□□□□□ -1.53
ATG4BQ9Y4P1 AP000926.3-201ENST00000497201 299 ntBASIC5.5□□□□□ -1.53
ATG4BQ9Y4P1 RNA5SP271-201ENST00000516700 88 ntBASIC5.5□□□□□ -1.53
ATG4BQ9Y4P1 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC5.5□□□□□ -1.53
ATG4BQ9Y4P1 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
ATG4BQ9Y4P1 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC5.5□□□□□ -1.53
ATG4BQ9Y4P1 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC5.5□□□□□ -1.53
ATG4BQ9Y4P1 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC5.5□□□□□ -1.53
ATG4BQ9Y4P1 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC5.5□□□□□ -1.53
ATG4BQ9Y4P1 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC5.5□□□□□ -1.53
ATG4BQ9Y4P1 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC5.5□□□□□ -1.53
ATG4BQ9Y4P1 AC023389.2-201ENST00000580031 955 ntBASIC5.5□□□□□ -1.53
ATG4BQ9Y4P1 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC5.5□□□□□ -1.53
ATG4BQ9Y4P1 AC241377.1-201ENST00000619797 406 ntBASIC5.5□□□□□ -1.53
ATG4BQ9Y4P1 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.5□□□□□ -1.53
ATG4BQ9Y4P1 AC020656.2-201ENST00000613291 5309 ntBASIC5.5□□□□□ -1.53
ATG4BQ9Y4P1 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
ATG4BQ9Y4P1 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
ATG4BQ9Y4P1 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
ATG4BQ9Y4P1 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
ATG4BQ9Y4P1 AC232271.1-201ENST00000602455 2715 ntBASIC5.5□□□□□ -1.53
ATG4BQ9Y4P1 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC5.5□□□□□ -1.53
ATG4BQ9Y4P1 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
ATG4BQ9Y4P1 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
ATG4BQ9Y4P1 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC5.5□□□□□ -1.53
ATG4BQ9Y4P1 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC5.5□□□□□ -1.53
ATG4BQ9Y4P1 AC011933.2-201ENST00000578539 2790 ntBASIC5.5□□□□□ -1.53
ATG4BQ9Y4P1 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
ATG4BQ9Y4P1 NLRP3P1-201ENST00000622303 1785 ntBASIC5.5□□□□□ -1.53
ATG4BQ9Y4P1 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
ATG4BQ9Y4P1 NAT2-201ENST00000286479 1322 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
ATG4BQ9Y4P1 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
ATG4BQ9Y4P1 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
ATG4BQ9Y4P1 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
ATG4BQ9Y4P1 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
ATG4BQ9Y4P1 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC5.49□□□□□ -1.53
ATG4BQ9Y4P1 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC5.49□□□□□ -1.53
ATG4BQ9Y4P1 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
ATG4BQ9Y4P1 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
ATG4BQ9Y4P1 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
ATG4BQ9Y4P1 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
ATG4BQ9Y4P1 CAPSL-201ENST00000397366 969 ntAPPRIS P1 TSL 3 BASIC5.49□□□□□ -1.53
ATG4BQ9Y4P1 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC5.49□□□□□ -1.53
ATG4BQ9Y4P1 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC5.49□□□□□ -1.53
ATG4BQ9Y4P1 AC021876.1-201ENST00000425959 359 ntBASIC5.49□□□□□ -1.53
ATG4BQ9Y4P1 PQLC2L-202ENST00000426338 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
ATG4BQ9Y4P1 AL590399.2-201ENST00000427536 309 ntBASIC5.49□□□□□ -1.53
ATG4BQ9Y4P1 BX119904.3-201ENST00000428194 957 ntBASIC5.49□□□□□ -1.53
ATG4BQ9Y4P1 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC5.49□□□□□ -1.53
ATG4BQ9Y4P1 AC126120.1-201ENST00000431082 470 ntBASIC5.49□□□□□ -1.53
ATG4BQ9Y4P1 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC5.49□□□□□ -1.53
ATG4BQ9Y4P1 KRT8P51-201ENST00000438938 274 ntBASIC5.49□□□□□ -1.53
ATG4BQ9Y4P1 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC5.49□□□□□ -1.53
ATG4BQ9Y4P1 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC5.49□□□□□ -1.53
ATG4BQ9Y4P1 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC5.49□□□□□ -1.53
ATG4BQ9Y4P1 AC016724.1-201ENST00000453215 421 ntBASIC5.49□□□□□ -1.53
ATG4BQ9Y4P1 SYPL1-205ENST00000470347 1193 ntTSL 3 BASIC5.49□□□□□ -1.53
ATG4BQ9Y4P1 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
ATG4BQ9Y4P1 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
ATG4BQ9Y4P1 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC5.49□□□□□ -1.53
ATG4BQ9Y4P1 AC105420.1-201ENST00000504389 582 ntBASIC5.49□□□□□ -1.53
ATG4BQ9Y4P1 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC5.49□□□□□ -1.53
ATG4BQ9Y4P1 AC079089.1-202ENST00000528800 1256 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
ATG4BQ9Y4P1 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC5.49□□□□□ -1.53
ATG4BQ9Y4P1 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC5.49□□□□□ -1.53
ATG4BQ9Y4P1 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC5.49□□□□□ -1.53
ATG4BQ9Y4P1 AC126615.2-201ENST00000553003 515 ntBASIC5.49□□□□□ -1.53
ATG4BQ9Y4P1 AL163952.1-202ENST00000569625 600 ntBASIC5.49□□□□□ -1.53
ATG4BQ9Y4P1 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC5.49□□□□□ -1.53
ATG4BQ9Y4P1 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC5.49□□□□□ -1.53
ATG4BQ9Y4P1 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC5.49□□□□□ -1.53
ATG4BQ9Y4P1 AL513327.3-201ENST00000602618 469 ntBASIC5.49□□□□□ -1.53
ATG4BQ9Y4P1 AC100767.2-201ENST00000604840 693 ntBASIC5.49□□□□□ -1.53
ATG4BQ9Y4P1 FAM27E4-201ENST00000605259 342 ntBASIC5.49□□□□□ -1.53
ATG4BQ9Y4P1 RPL12P48-201ENST00000605620 304 ntBASIC5.49□□□□□ -1.53
ATG4BQ9Y4P1 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC5.49□□□□□ -1.53
ATG4BQ9Y4P1 AL133481.2-203ENST00000607558 139 ntBASIC5.49□□□□□ -1.53
ATG4BQ9Y4P1 RNU6-84P-201ENST00000607737 102 ntBASIC5.49□□□□□ -1.53
ATG4BQ9Y4P1 UGP2-232ENST00000640075 567 ntTSL 5 BASIC5.49□□□□□ -1.53
ATG4BQ9Y4P1 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
ATG4BQ9Y4P1 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC5.49□□□□□ -1.53
ATG4BQ9Y4P1 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 76.8 ms