Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 WBP1LP8-201ENST00000617401 327 ntBASIC8.32□□□□□ -1.08
SHANK2Q9UPX8 CDYL2-207ENST00000570137 8159 ntAPPRIS P2 TSL 1 (best) BASIC8.32□□□□□ -1.08
SHANK2Q9UPX8 UVRAG-205ENST00000528420 2463 ntTSL 2 BASIC8.32□□□□□ -1.08
SHANK2Q9UPX8 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC8.32□□□□□ -1.08
SHANK2Q9UPX8 NCR3LG1-201ENST00000338965 6438 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
SHANK2Q9UPX8 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC8.32□□□□□ -1.08
SHANK2Q9UPX8 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
SHANK2Q9UPX8 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC8.32□□□□□ -1.08
SHANK2Q9UPX8 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.08
SHANK2Q9UPX8 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
SHANK2Q9UPX8 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC8.32□□□□□ -1.08
SHANK2Q9UPX8 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC8.32□□□□□ -1.08
SHANK2Q9UPX8 MRRF-207ENST00000373729 870 ntTSL 3 BASIC8.32□□□□□ -1.08
SHANK2Q9UPX8 MIR551A-201ENST00000385042 96 ntBASIC8.32□□□□□ -1.08
SHANK2Q9UPX8 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC8.32□□□□□ -1.08
SHANK2Q9UPX8 KRT8P51-201ENST00000438938 274 ntBASIC8.32□□□□□ -1.08
SHANK2Q9UPX8 MEMO1P4-201ENST00000453590 386 ntBASIC8.32□□□□□ -1.08
SHANK2Q9UPX8 RPL12P39-201ENST00000455456 496 ntBASIC8.32□□□□□ -1.08
SHANK2Q9UPX8 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC8.32□□□□□ -1.08
SHANK2Q9UPX8 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC8.32□□□□□ -1.08
SHANK2Q9UPX8 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC8.32□□□□□ -1.08
SHANK2Q9UPX8 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
SHANK2Q9UPX8 AC079075.1-201ENST00000559543 878 ntBASIC8.32□□□□□ -1.08
SHANK2Q9UPX8 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC8.32□□□□□ -1.08
SHANK2Q9UPX8 AC011840.5-201ENST00000582125 771 ntBASIC8.32□□□□□ -1.08
SHANK2Q9UPX8 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC8.32□□□□□ -1.08
SHANK2Q9UPX8 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC8.32□□□□□ -1.08
SHANK2Q9UPX8 AC109583.2-201ENST00000617367 129 ntBASIC8.32□□□□□ -1.08
SHANK2Q9UPX8 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC8.32□□□□□ -1.08
SHANK2Q9UPX8 MED28-201ENST00000237380 10868 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
SHANK2Q9UPX8 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
SHANK2Q9UPX8 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
SHANK2Q9UPX8 ZNF101P1-201ENST00000435701 1720 ntBASIC8.31□□□□□ -1.08
SHANK2Q9UPX8 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC8.31□□□□□ -1.08
SHANK2Q9UPX8 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
SHANK2Q9UPX8 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC8.31□□□□□ -1.08
SHANK2Q9UPX8 KIAA0232-202ENST00000425103 7771 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
SHANK2Q9UPX8 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
SHANK2Q9UPX8 METTL8-217ENST00000612742 8132 ntAPPRIS P1 TSL 2 BASIC8.31□□□□□ -1.08
SHANK2Q9UPX8 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC8.31□□□□□ -1.08
SHANK2Q9UPX8 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC8.31□□□□□ -1.08
SHANK2Q9UPX8 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC8.31□□□□□ -1.08
SHANK2Q9UPX8 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
SHANK2Q9UPX8 RPS29-202ENST00000396020 7062 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
SHANK2Q9UPX8 SCN8A-201ENST00000354534 11556 ntAPPRIS P3 TSL 1 (best) BASIC8.31□□□□□ -1.08
SHANK2Q9UPX8 RNA5SP305-201ENST00000362665 119 ntBASIC8.31□□□□□ -1.08
SHANK2Q9UPX8 RNU4-2-201ENST00000365668 141 ntBASIC8.31□□□□□ -1.08
SHANK2Q9UPX8 RNA5SP487-201ENST00000410186 122 ntBASIC8.31□□□□□ -1.08
SHANK2Q9UPX8 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC8.31□□□□□ -1.08
SHANK2Q9UPX8 ATP5LP5-201ENST00000483050 299 ntBASIC8.31□□□□□ -1.08
SHANK2Q9UPX8 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
SHANK2Q9UPX8 AC096736.3-201ENST00000510753 993 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
SHANK2Q9UPX8 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC8.31□□□□□ -1.08
SHANK2Q9UPX8 RNU6ATAC24P-201ENST00000516811 135 ntBASIC8.31□□□□□ -1.08
SHANK2Q9UPX8 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC8.31□□□□□ -1.08
SHANK2Q9UPX8 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC8.31□□□□□ -1.08
SHANK2Q9UPX8 AC010435.1-201ENST00000623353 1177 ntBASIC8.31□□□□□ -1.08
SHANK2Q9UPX8 PTPN14-201ENST00000366956 12985 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
SHANK2Q9UPX8 AC022819.1-201ENST00000563495 3910 ntBASIC8.31□□□□□ -1.08
SHANK2Q9UPX8 ZNF484-204ENST00000395506 4031 ntTSL 3 BASIC8.3□□□□□ -1.08
SHANK2Q9UPX8 MAVS-202ENST00000428216 11714 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
SHANK2Q9UPX8 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
SHANK2Q9UPX8 AC010329.1-201ENST00000593903 8328 ntBASIC8.3□□□□□ -1.08
SHANK2Q9UPX8 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
SHANK2Q9UPX8 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
SHANK2Q9UPX8 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
SHANK2Q9UPX8 SPATA31C1-201ENST00000420021 3895 ntBASIC8.3□□□□□ -1.08
SHANK2Q9UPX8 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.08
SHANK2Q9UPX8 ARHGEF6-201ENST00000250617 6019 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
SHANK2Q9UPX8 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
SHANK2Q9UPX8 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC8.3□□□□□ -1.08
SHANK2Q9UPX8 PLCZ1-201ENST00000266505 2148 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
SHANK2Q9UPX8 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
SHANK2Q9UPX8 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC8.3□□□□□ -1.08
SHANK2Q9UPX8 AC013442.1-201ENST00000397347 228 ntBASIC8.3□□□□□ -1.08
SHANK2Q9UPX8 AL133325.1-201ENST00000421090 382 ntBASIC8.3□□□□□ -1.08
SHANK2Q9UPX8 CRIP1P1-201ENST00000427567 185 ntBASIC8.3□□□□□ -1.08
SHANK2Q9UPX8 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC8.3□□□□□ -1.08
SHANK2Q9UPX8 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC8.3□□□□□ -1.08
SHANK2Q9UPX8 AL596266.1-201ENST00000448132 400 ntBASIC8.3□□□□□ -1.08
SHANK2Q9UPX8 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC8.3□□□□□ -1.08
SHANK2Q9UPX8 AC091153.1-201ENST00000466297 402 ntBASIC8.3□□□□□ -1.08
SHANK2Q9UPX8 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC8.3□□□□□ -1.08
SHANK2Q9UPX8 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC8.3□□□□□ -1.08
SHANK2Q9UPX8 AC015864.1-201ENST00000496512 544 ntBASIC8.3□□□□□ -1.08
SHANK2Q9UPX8 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC8.3□□□□□ -1.08
SHANK2Q9UPX8 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC8.3□□□□□ -1.08
SHANK2Q9UPX8 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC8.3□□□□□ -1.08
SHANK2Q9UPX8 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC8.3□□□□□ -1.08
SHANK2Q9UPX8 OR5D13-201ENST00000623930 945 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
SHANK2Q9UPX8 PRKCA-202ENST00000413366 8751 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
SHANK2Q9UPX8 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
SHANK2Q9UPX8 TLR4-201ENST00000355622 4844 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
SHANK2Q9UPX8 AP003175.1-201ENST00000641383 6658 ntBASIC8.3□□□□□ -1.08
SHANK2Q9UPX8 AC090673.1-202ENST00000356215 4617 ntTSL 2 BASIC8.3□□□□□ -1.08
SHANK2Q9UPX8 BRD7P6-201ENST00000431406 1860 ntBASIC8.29□□□□□ -1.08
SHANK2Q9UPX8 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC8.29□□□□□ -1.08
SHANK2Q9UPX8 KIAA1217-202ENST00000376451 7383 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
SHANK2Q9UPX8 AC079777.1-201ENST00000623836 1953 ntBASIC8.29□□□□□ -1.08
SHANK2Q9UPX8 ARMCX5-202ENST00000372742 2647 ntAPPRIS P1 TSL 2 BASIC8.29□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 109.8 ms