Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 AC244502.2-201ENST00000543361 851 ntBASIC6.84□□□□□ -1.31
CLIP2Q9UDT6 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC6.84□□□□□ -1.31
CLIP2Q9UDT6 C15orf41-204ENST00000562877 764 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
CLIP2Q9UDT6 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC6.84□□□□□ -1.31
CLIP2Q9UDT6 AC022919.1-201ENST00000624979 626 ntBASIC6.84□□□□□ -1.31
CLIP2Q9UDT6 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC6.84□□□□□ -1.31
CLIP2Q9UDT6 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
CLIP2Q9UDT6 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
CLIP2Q9UDT6 CASC19-260ENST00000641828 2001 ntBASIC6.84□□□□□ -1.31
CLIP2Q9UDT6 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC6.83□□□□□ -1.32
CLIP2Q9UDT6 NR1H5P-201ENST00000452683 1377 ntBASIC6.83□□□□□ -1.32
CLIP2Q9UDT6 AC130304.1-201ENST00000622942 2385 ntBASIC6.83□□□□□ -1.32
CLIP2Q9UDT6 Z95114.1-201ENST00000624264 14574 ntBASIC6.83□□□□□ -1.32
CLIP2Q9UDT6 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
CLIP2Q9UDT6 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC6.83□□□□□ -1.32
CLIP2Q9UDT6 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC6.83□□□□□ -1.32
CLIP2Q9UDT6 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
CLIP2Q9UDT6 AL591135.1-201ENST00000401578 5914 ntBASIC6.83□□□□□ -1.32
CLIP2Q9UDT6 RN7SKP186-201ENST00000365371 303 ntBASIC6.83□□□□□ -1.32
CLIP2Q9UDT6 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC6.83□□□□□ -1.32
CLIP2Q9UDT6 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC6.83□□□□□ -1.32
CLIP2Q9UDT6 RPS23P6-201ENST00000466136 431 ntBASIC6.83□□□□□ -1.32
CLIP2Q9UDT6 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC6.83□□□□□ -1.32
CLIP2Q9UDT6 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC6.83□□□□□ -1.32
CLIP2Q9UDT6 TRBV5-2-201ENST00000489095 273 ntBASIC6.83□□□□□ -1.32
CLIP2Q9UDT6 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC6.83□□□□□ -1.32
CLIP2Q9UDT6 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC6.83□□□□□ -1.32
CLIP2Q9UDT6 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC6.83□□□□□ -1.32
CLIP2Q9UDT6 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC6.83□□□□□ -1.32
CLIP2Q9UDT6 AL034374.2-201ENST00000605281 548 ntBASIC6.83□□□□□ -1.32
CLIP2Q9UDT6 AC004477.3-201ENST00000614061 590 ntBASIC6.83□□□□□ -1.32
CLIP2Q9UDT6 AC087565.3-203ENST00000641018 837 ntBASIC6.83□□□□□ -1.32
CLIP2Q9UDT6 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
CLIP2Q9UDT6 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC6.83□□□□□ -1.32
CLIP2Q9UDT6 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC6.83□□□□□ -1.32
CLIP2Q9UDT6 AC120036.2-201ENST00000509729 1474 ntBASIC6.83□□□□□ -1.32
CLIP2Q9UDT6 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
CLIP2Q9UDT6 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
CLIP2Q9UDT6 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
CLIP2Q9UDT6 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
CLIP2Q9UDT6 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
CLIP2Q9UDT6 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
CLIP2Q9UDT6 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC6.82□□□□□ -1.32
CLIP2Q9UDT6 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC6.82□□□□□ -1.32
CLIP2Q9UDT6 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
CLIP2Q9UDT6 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
CLIP2Q9UDT6 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC6.82□□□□□ -1.32
CLIP2Q9UDT6 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
CLIP2Q9UDT6 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC6.82□□□□□ -1.32
CLIP2Q9UDT6 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
CLIP2Q9UDT6 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
CLIP2Q9UDT6 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
CLIP2Q9UDT6 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC6.82□□□□□ -1.32
CLIP2Q9UDT6 AC079355.1-201ENST00000421770 223 ntBASIC6.82□□□□□ -1.32
CLIP2Q9UDT6 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC6.82□□□□□ -1.32
CLIP2Q9UDT6 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC6.82□□□□□ -1.32
CLIP2Q9UDT6 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC6.82□□□□□ -1.32
CLIP2Q9UDT6 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC6.82□□□□□ -1.32
CLIP2Q9UDT6 LRRC37A14P-201ENST00000452297 462 ntBASIC6.82□□□□□ -1.32
CLIP2Q9UDT6 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC6.82□□□□□ -1.32
CLIP2Q9UDT6 SSX6-203ENST00000509958 336 ntTSL 3 BASIC6.82□□□□□ -1.32
CLIP2Q9UDT6 SCARNA6.1-201ENST00000516989 238 ntBASIC6.82□□□□□ -1.32
CLIP2Q9UDT6 SNORA43.3-201ENST00000517240 103 ntBASIC6.82□□□□□ -1.32
CLIP2Q9UDT6 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC6.82□□□□□ -1.32
CLIP2Q9UDT6 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC6.82□□□□□ -1.32
CLIP2Q9UDT6 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC6.82□□□□□ -1.32
CLIP2Q9UDT6 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC6.82□□□□□ -1.32
CLIP2Q9UDT6 AC010547.6-201ENST00000571789 193 ntBASIC6.82□□□□□ -1.32
CLIP2Q9UDT6 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC6.82□□□□□ -1.32
CLIP2Q9UDT6 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
CLIP2Q9UDT6 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC6.82□□□□□ -1.32
CLIP2Q9UDT6 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
CLIP2Q9UDT6 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
CLIP2Q9UDT6 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC6.82□□□□□ -1.32
CLIP2Q9UDT6 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC6.82□□□□□ -1.32
CLIP2Q9UDT6 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC6.82□□□□□ -1.32
CLIP2Q9UDT6 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC6.82□□□□□ -1.32
CLIP2Q9UDT6 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC6.82□□□□□ -1.32
CLIP2Q9UDT6 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC6.81□□□□□ -1.32
CLIP2Q9UDT6 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
CLIP2Q9UDT6 MFSD8-219ENST00000641228 2559 ntBASIC6.81□□□□□ -1.32
CLIP2Q9UDT6 CASP5-208ENST00000526056 1344 ntTSL 5 BASIC6.81□□□□□ -1.32
CLIP2Q9UDT6 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC6.81□□□□□ -1.32
CLIP2Q9UDT6 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
CLIP2Q9UDT6 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
CLIP2Q9UDT6 METTL5-204ENST00000409340 472 ntTSL 5 BASIC6.81□□□□□ -1.32
CLIP2Q9UDT6 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC6.81□□□□□ -1.32
CLIP2Q9UDT6 AL513325.1-201ENST00000417716 1034 ntBASIC6.81□□□□□ -1.32
CLIP2Q9UDT6 MRPS21P2-201ENST00000424704 264 ntBASIC6.81□□□□□ -1.32
CLIP2Q9UDT6 AC002504.1-201ENST00000438281 691 ntBASIC6.81□□□□□ -1.32
CLIP2Q9UDT6 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC6.81□□□□□ -1.32
CLIP2Q9UDT6 RPSAP39-201ENST00000467439 883 ntBASIC6.81□□□□□ -1.32
CLIP2Q9UDT6 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC6.81□□□□□ -1.32
CLIP2Q9UDT6 AC109481.1-201ENST00000509173 282 ntBASIC6.81□□□□□ -1.32
CLIP2Q9UDT6 TOMM22P4-201ENST00000511318 336 ntBASIC6.81□□□□□ -1.32
CLIP2Q9UDT6 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC6.81□□□□□ -1.32
CLIP2Q9UDT6 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC6.81□□□□□ -1.32
CLIP2Q9UDT6 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
CLIP2Q9UDT6 AC022404.1-201ENST00000555320 273 ntBASIC6.81□□□□□ -1.32
CLIP2Q9UDT6 DPPA2P4-201ENST00000563717 878 ntBASIC6.81□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 78.5 ms