Protein–RNA interactions for Protein: Q9P2H5

USP35, Ubiquitin carboxyl-terminal hydrolase 35, humanhuman

Predictions only

Length 1,018 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP35Q9P2H5 NENFP1-201ENST00000419476 466 ntBASIC8.42□□□□□ -1.06
USP35Q9P2H5 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC8.42□□□□□ -1.06
USP35Q9P2H5 BX323845.3-201ENST00000428215 527 ntBASIC8.42□□□□□ -1.06
USP35Q9P2H5 AC003991.1-210ENST00000434733 1048 ntTSL 3 BASIC8.42□□□□□ -1.06
USP35Q9P2H5 PCBP2P1-201ENST00000437262 977 ntBASIC8.42□□□□□ -1.06
USP35Q9P2H5 AC008410.1-201ENST00000483777 339 ntBASIC8.42□□□□□ -1.06
USP35Q9P2H5 RN7SL193P-201ENST00000491708 276 ntBASIC8.42□□□□□ -1.06
USP35Q9P2H5 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC8.42□□□□□ -1.06
USP35Q9P2H5 AC021087.2-201ENST00000504656 1203 ntBASIC8.42□□□□□ -1.06
USP35Q9P2H5 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC8.42□□□□□ -1.06
USP35Q9P2H5 CR383658.1-201ENST00000514609 734 ntBASIC8.42□□□□□ -1.06
USP35Q9P2H5 AC034244.2-201ENST00000514668 858 ntBASIC8.42□□□□□ -1.06
USP35Q9P2H5 AC103833.1-201ENST00000517442 172 ntBASIC8.42□□□□□ -1.06
USP35Q9P2H5 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC8.42□□□□□ -1.06
USP35Q9P2H5 LINC02055-205ENST00000521090 774 ntTSL 3 BASIC8.42□□□□□ -1.06
USP35Q9P2H5 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC8.42□□□□□ -1.06
USP35Q9P2H5 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC8.42□□□□□ -1.06
USP35Q9P2H5 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC8.42□□□□□ -1.06
USP35Q9P2H5 SNORD39.2-201ENST00000579995 76 ntBASIC8.42□□□□□ -1.06
USP35Q9P2H5 MTCO2P22-201ENST00000603246 681 ntBASIC8.42□□□□□ -1.06
USP35Q9P2H5 AL157899.1-201ENST00000604110 936 ntBASIC8.42□□□□□ -1.06
USP35Q9P2H5 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC8.42□□□□□ -1.06
USP35Q9P2H5 AC120057.5-201ENST00000623840 154 ntBASIC8.42□□□□□ -1.06
USP35Q9P2H5 AC092159.4-201ENST00000624944 550 ntBASIC8.42□□□□□ -1.06
USP35Q9P2H5 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
USP35Q9P2H5 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC8.42□□□□□ -1.06
USP35Q9P2H5 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC8.42□□□□□ -1.06
USP35Q9P2H5 AL136317.2-201ENST00000619851 2254 ntTSL 2 BASIC8.42□□□□□ -1.06
USP35Q9P2H5 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC8.42□□□□□ -1.06
USP35Q9P2H5 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
USP35Q9P2H5 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
USP35Q9P2H5 CX3CR1-202ENST00000399220 3106 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
USP35Q9P2H5 AC009120.2-204ENST00000621548 2032 ntBASIC8.41□□□□□ -1.06
USP35Q9P2H5 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
USP35Q9P2H5 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
USP35Q9P2H5 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC8.41□□□□□ -1.06
USP35Q9P2H5 SETP9-201ENST00000423837 832 ntBASIC8.41□□□□□ -1.06
USP35Q9P2H5 AC093084.1-201ENST00000424233 687 ntBASIC8.41□□□□□ -1.06
USP35Q9P2H5 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC8.41□□□□□ -1.06
USP35Q9P2H5 CFL1P4-201ENST00000451536 498 ntBASIC8.41□□□□□ -1.06
USP35Q9P2H5 AC002553.3-201ENST00000453002 341 ntBASIC8.41□□□□□ -1.06
USP35Q9P2H5 AC026348.1-201ENST00000462549 1053 ntBASIC8.41□□□□□ -1.06
USP35Q9P2H5 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC8.41□□□□□ -1.06
USP35Q9P2H5 LDHC-205ENST00000537486 583 ntTSL 5 BASIC8.41□□□□□ -1.06
USP35Q9P2H5 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC8.41□□□□□ -1.06
USP35Q9P2H5 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC8.41□□□□□ -1.06
USP35Q9P2H5 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC8.41□□□□□ -1.06
USP35Q9P2H5 AC233266.2-201ENST00000567067 528 ntBASIC8.41□□□□□ -1.06
USP35Q9P2H5 AC020916.2-201ENST00000591242 360 ntBASIC8.41□□□□□ -1.06
USP35Q9P2H5 AC135178.6-201ENST00000605314 398 ntBASIC8.41□□□□□ -1.06
USP35Q9P2H5 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC8.41□□□□□ -1.06
USP35Q9P2H5 AC004775.1-201ENST00000607389 753 ntBASIC8.41□□□□□ -1.06
USP35Q9P2H5 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC8.41□□□□□ -1.06
USP35Q9P2H5 AC004836.1-201ENST00000623032 634 ntBASIC8.41□□□□□ -1.06
USP35Q9P2H5 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC8.41□□□□□ -1.06
USP35Q9P2H5 WDR75-207ENST00000631047 270 ntTSL 5 BASIC8.41□□□□□ -1.06
USP35Q9P2H5 ASAH1-224ENST00000636269 685 ntTSL 3 BASIC8.41□□□□□ -1.06
USP35Q9P2H5 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
USP35Q9P2H5 CNTN5-204ENST00000524871 6258 ntAPPRIS P4 TSL 1 (best) BASIC8.41□□□□□ -1.06
USP35Q9P2H5 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC8.41□□□□□ -1.06
USP35Q9P2H5 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC8.41□□□□□ -1.06
USP35Q9P2H5 N4BP2-201ENST00000261435 9744 ntAPPRIS P1 TSL 5 BASIC8.41□□□□□ -1.06
USP35Q9P2H5 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC8.41□□□□□ -1.06
USP35Q9P2H5 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
USP35Q9P2H5 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC8.4□□□□□ -1.06
USP35Q9P2H5 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC8.4□□□□□ -1.06
USP35Q9P2H5 ESRRG-208ENST00000391890 5542 ntAPPRIS P1 TSL 5 BASIC8.4□□□□□ -1.06
USP35Q9P2H5 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
USP35Q9P2H5 LAMA2-201ENST00000421865 9640 ntAPPRIS P2 TSL 5 BASIC8.4□□□□□ -1.06
USP35Q9P2H5 CHD6-203ENST00000373233 10818 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
USP35Q9P2H5 OR2M1P-201ENST00000318104 951 ntBASIC8.4□□□□□ -1.06
USP35Q9P2H5 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC8.4□□□□□ -1.06
USP35Q9P2H5 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC8.4□□□□□ -1.06
USP35Q9P2H5 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC8.4□□□□□ -1.06
USP35Q9P2H5 RN7SKP121-201ENST00000410842 305 ntBASIC8.4□□□□□ -1.06
USP35Q9P2H5 Z68868.1-201ENST00000429048 544 ntBASIC8.4□□□□□ -1.06
USP35Q9P2H5 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC8.4□□□□□ -1.06
USP35Q9P2H5 LINC01291-203ENST00000435984 565 ntTSL 3 BASIC8.4□□□□□ -1.06
USP35Q9P2H5 RPSAP37-201ENST00000470913 821 ntBASIC8.4□□□□□ -1.06
USP35Q9P2H5 EIF3LP3-201ENST00000495197 822 ntBASIC8.4□□□□□ -1.06
USP35Q9P2H5 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC8.4□□□□□ -1.06
USP35Q9P2H5 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC8.4□□□□□ -1.06
USP35Q9P2H5 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC8.4□□□□□ -1.06
USP35Q9P2H5 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC8.4□□□□□ -1.06
USP35Q9P2H5 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC8.4□□□□□ -1.06
USP35Q9P2H5 SMARCE1P3-201ENST00000553649 1231 ntBASIC8.4□□□□□ -1.06
USP35Q9P2H5 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC8.4□□□□□ -1.06
USP35Q9P2H5 FAM106CP-201ENST00000582212 507 ntBASIC8.4□□□□□ -1.06
USP35Q9P2H5 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC8.4□□□□□ -1.06
USP35Q9P2H5 AC005242.1-201ENST00000585658 438 ntBASIC8.4□□□□□ -1.06
USP35Q9P2H5 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC8.4□□□□□ -1.06
USP35Q9P2H5 MTCO3P22-201ENST00000603219 784 ntBASIC8.4□□□□□ -1.06
USP35Q9P2H5 AC211433.2-201ENST00000608433 387 ntBASIC8.4□□□□□ -1.06
USP35Q9P2H5 AP000864.1-201ENST00000609424 650 ntBASIC8.4□□□□□ -1.06
USP35Q9P2H5 AC006213.4-201ENST00000616184 634 ntBASIC8.4□□□□□ -1.06
USP35Q9P2H5 AP001153.1-201ENST00000641024 338 ntBASIC8.4□□□□□ -1.06
USP35Q9P2H5 CENPJ-206ENST00000616936 5020 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
USP35Q9P2H5 RAP1GDS1-204ENST00000408900 1942 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
USP35Q9P2H5 HPS5-205ENST00000438420 4147 ntTSL 1 (best) BASIC8.4□□□□□ -1.07
USP35Q9P2H5 IPO8-209ENST00000544829 3212 ntTSL 2 BASIC8.4□□□□□ -1.07
Retrieved 100 of 98,524 protein–RNA pairs in 84.7 ms