Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
PDLIM7Q9NR12 CTNND1-233ENST00000532787 5751 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
PDLIM7Q9NR12 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC7.11□□□□□ -1.27
PDLIM7Q9NR12 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC7.11□□□□□ -1.27
PDLIM7Q9NR12 THRB-IT1-201ENST00000425296 1754 ntTSL 2 BASIC7.11□□□□□ -1.27
PDLIM7Q9NR12 KIAA0391-201ENST00000250377 6118 ntTSL 2 BASIC7.11□□□□□ -1.27
PDLIM7Q9NR12 BEST1-202ENST00000449131 4267 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
PDLIM7Q9NR12 AC123769.2-201ENST00000624332 5984 ntBASIC7.11□□□□□ -1.27
PDLIM7Q9NR12 OR52N5-201ENST00000317093 1034 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
PDLIM7Q9NR12 OR5H2-201ENST00000355273 945 ntBASIC7.11□□□□□ -1.27
PDLIM7Q9NR12 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
PDLIM7Q9NR12 Y_RNA.169-201ENST00000363745 96 ntBASIC7.11□□□□□ -1.27
PDLIM7Q9NR12 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
PDLIM7Q9NR12 TSACC-201ENST00000368251 438 ntAPPRIS P1 TSL 3 BASIC7.11□□□□□ -1.27
PDLIM7Q9NR12 RNU6-354P-201ENST00000383862 107 ntBASIC7.11□□□□□ -1.27
PDLIM7Q9NR12 RNU6-610P-201ENST00000384264 107 ntBASIC7.11□□□□□ -1.27
PDLIM7Q9NR12 HMGB1P13-201ENST00000406019 642 ntBASIC7.11□□□□□ -1.27
PDLIM7Q9NR12 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC7.11□□□□□ -1.27
PDLIM7Q9NR12 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC7.11□□□□□ -1.27
PDLIM7Q9NR12 SLC4A1APP1-201ENST00000419995 602 ntBASIC7.11□□□□□ -1.27
PDLIM7Q9NR12 AC090960.1-201ENST00000421072 306 ntBASIC7.11□□□□□ -1.27
PDLIM7Q9NR12 FO393414.1-201ENST00000428697 1184 ntBASIC7.11□□□□□ -1.27
PDLIM7Q9NR12 IGLV3-4-201ENST00000432300 244 ntBASIC7.11□□□□□ -1.27
PDLIM7Q9NR12 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC7.11□□□□□ -1.27
PDLIM7Q9NR12 MTCYBP29-201ENST00000436327 1006 ntBASIC7.11□□□□□ -1.27
PDLIM7Q9NR12 AC023141.3-201ENST00000436698 278 ntBASIC7.11□□□□□ -1.27
PDLIM7Q9NR12 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC7.11□□□□□ -1.27
PDLIM7Q9NR12 GSTA7P-201ENST00000438425 448 ntBASIC7.11□□□□□ -1.27
PDLIM7Q9NR12 MED6P1-201ENST00000439659 713 ntBASIC7.11□□□□□ -1.27
PDLIM7Q9NR12 MTND1P27-201ENST00000451117 902 ntBASIC7.11□□□□□ -1.27
PDLIM7Q9NR12 HMGB1P26-201ENST00000452520 628 ntBASIC7.11□□□□□ -1.27
PDLIM7Q9NR12 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC7.11□□□□□ -1.27
PDLIM7Q9NR12 MTND2P28-201ENST00000457540 1044 ntBASIC7.11□□□□□ -1.27
PDLIM7Q9NR12 CST12P-201ENST00000457644 362 ntBASIC7.11□□□□□ -1.27
PDLIM7Q9NR12 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
PDLIM7Q9NR12 RN7SL717P-201ENST00000478343 297 ntBASIC7.11□□□□□ -1.27
PDLIM7Q9NR12 AC021193.1-201ENST00000511607 420 ntBASIC7.11□□□□□ -1.27
PDLIM7Q9NR12 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC7.11□□□□□ -1.27
PDLIM7Q9NR12 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC7.11□□□□□ -1.27
PDLIM7Q9NR12 MRPS36P3-201ENST00000519284 130 ntBASIC7.11□□□□□ -1.27
PDLIM7Q9NR12 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC7.11□□□□□ -1.27
PDLIM7Q9NR12 OR4V1P-201ENST00000525394 1140 ntBASIC7.11□□□□□ -1.27
PDLIM7Q9NR12 AC007956.1-201ENST00000555623 542 ntBASIC7.11□□□□□ -1.27
PDLIM7Q9NR12 RNASE11-208ENST00000555841 886 ntAPPRIS P2 TSL 1 (best) BASIC7.11□□□□□ -1.27
PDLIM7Q9NR12 SLC25A3P1-203ENST00000563752 460 ntTSL 2 BASIC7.11□□□□□ -1.27
PDLIM7Q9NR12 AC027455.1-201ENST00000574104 594 ntBASIC7.11□□□□□ -1.27
PDLIM7Q9NR12 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC7.11□□□□□ -1.27
PDLIM7Q9NR12 CT45A1-201ENST00000594117 1087 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
PDLIM7Q9NR12 SNX6P1-201ENST00000601728 1224 ntBASIC7.11□□□□□ -1.27
PDLIM7Q9NR12 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC7.11□□□□□ -1.27
PDLIM7Q9NR12 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
PDLIM7Q9NR12 SNORA74.4-201ENST00000607595 199 ntBASIC7.11□□□□□ -1.27
PDLIM7Q9NR12 FRG1EP-201ENST00000634469 770 ntBASIC7.11□□□□□ -1.27
PDLIM7Q9NR12 LINC02341-202ENST00000637462 1295 ntTSL 5 BASIC7.11□□□□□ -1.27
PDLIM7Q9NR12 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
PDLIM7Q9NR12 ALG13-224ENST00000610588 4175 ntTSL 2 BASIC7.11□□□□□ -1.27
PDLIM7Q9NR12 ADGRB3-203ENST00000546190 4569 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
PDLIM7Q9NR12 EPS15-203ENST00000371733 5225 ntAPPRIS P2 TSL 1 (best) BASIC7.11□□□□□ -1.27
PDLIM7Q9NR12 CCRL2-201ENST00000357392 1593 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
PDLIM7Q9NR12 EGFEM1P-205ENST00000483846 2327 ntTSL 5 BASIC7.11□□□□□ -1.27
PDLIM7Q9NR12 MGAM-208ENST00000549489 6525 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
PDLIM7Q9NR12 FOPNL-201ENST00000255759 2275 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
PDLIM7Q9NR12 USP37-201ENST00000258399 8032 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
PDLIM7Q9NR12 SLC26A5-205ENST00000393723 2174 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
PDLIM7Q9NR12 CASC18-202ENST00000548557 2503 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
PDLIM7Q9NR12 OR7D2-201ENST00000344248 3224 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
PDLIM7Q9NR12 AC093536.2-201ENST00000565257 1406 ntBASIC7.1□□□□□ -1.27
PDLIM7Q9NR12 DCAF10-201ENST00000242323 7393 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
PDLIM7Q9NR12 ATP2B4-204ENST00000367218 8918 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
PDLIM7Q9NR12 TAOK1-202ENST00000536202 4068 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
PDLIM7Q9NR12 MAP3K7CL-209ENST00000399947 2003 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
PDLIM7Q9NR12 SETDB1-205ENST00000368969 4370 ntAPPRIS P3 TSL 1 (best) BASIC7.1□□□□□ -1.27
PDLIM7Q9NR12 IL31RA-202ENST00000354961 2658 ntAPPRIS ALT2 TSL 5 BASIC7.1□□□□□ -1.27
PDLIM7Q9NR12 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC7.1□□□□□ -1.27
PDLIM7Q9NR12 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC7.1□□□□□ -1.27
PDLIM7Q9NR12 KCNMB2-204ENST00000432997 2552 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
PDLIM7Q9NR12 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC7.1□□□□□ -1.27
PDLIM7Q9NR12 AC017079.1-201ENST00000333650 415 ntBASIC7.1□□□□□ -1.27
PDLIM7Q9NR12 HIST1H1T-201ENST00000338379 718 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
PDLIM7Q9NR12 RNA5SP273-201ENST00000362484 113 ntBASIC7.1□□□□□ -1.27
PDLIM7Q9NR12 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC7.1□□□□□ -1.27
PDLIM7Q9NR12 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
PDLIM7Q9NR12 RN7SKP97-201ENST00000410966 333 ntBASIC7.1□□□□□ -1.27
PDLIM7Q9NR12 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC7.1□□□□□ -1.27
PDLIM7Q9NR12 AL158050.1-201ENST00000416077 457 ntBASIC7.1□□□□□ -1.27
PDLIM7Q9NR12 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC7.1□□□□□ -1.27
PDLIM7Q9NR12 MTND1P20-201ENST00000430341 950 ntBASIC7.1□□□□□ -1.27
PDLIM7Q9NR12 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
PDLIM7Q9NR12 AL133329.1-201ENST00000437466 478 ntTSL 3 BASIC7.1□□□□□ -1.27
PDLIM7Q9NR12 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC7.1□□□□□ -1.27
PDLIM7Q9NR12 MTND4P6-201ENST00000438297 472 ntBASIC7.1□□□□□ -1.27
PDLIM7Q9NR12 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC7.1□□□□□ -1.27
PDLIM7Q9NR12 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC7.1□□□□□ -1.27
PDLIM7Q9NR12 ZNF886P-201ENST00000450781 723 ntBASIC7.1□□□□□ -1.27
PDLIM7Q9NR12 OFD1P7Y-201ENST00000454643 1155 ntBASIC7.1□□□□□ -1.27
PDLIM7Q9NR12 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC7.1□□□□□ -1.27
PDLIM7Q9NR12 AC023141.9-201ENST00000458734 412 ntBASIC7.1□□□□□ -1.27
PDLIM7Q9NR12 AC008379.1-201ENST00000463655 464 ntBASIC7.1□□□□□ -1.27
PDLIM7Q9NR12 RN7SL643P-201ENST00000471845 291 ntBASIC7.1□□□□□ -1.27
PDLIM7Q9NR12 RAP1BP2-201ENST00000478270 544 ntBASIC7.1□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 85.6 ms