Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC5.82□□□□□ -1.48
LRRC40Q9H9A6 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC5.82□□□□□ -1.48
LRRC40Q9H9A6 COX6CP7-201ENST00000597056 208 ntBASIC5.82□□□□□ -1.48
LRRC40Q9H9A6 REV3L-214ENST00000619481 969 ntTSL 5 BASIC5.82□□□□□ -1.48
LRRC40Q9H9A6 AL357153.4-201ENST00000620487 1016 ntBASIC5.82□□□□□ -1.48
LRRC40Q9H9A6 AP003072.5-201ENST00000623872 773 ntBASIC5.82□□□□□ -1.48
LRRC40Q9H9A6 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
LRRC40Q9H9A6 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC5.82□□□□□ -1.48
LRRC40Q9H9A6 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.82□□□□□ -1.48
LRRC40Q9H9A6 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.82□□□□□ -1.48
LRRC40Q9H9A6 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
LRRC40Q9H9A6 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC5.81□□□□□ -1.48
LRRC40Q9H9A6 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
LRRC40Q9H9A6 SSXP3-201ENST00000442971 1300 ntBASIC5.81□□□□□ -1.48
LRRC40Q9H9A6 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
LRRC40Q9H9A6 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
LRRC40Q9H9A6 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC5.81□□□□□ -1.48
LRRC40Q9H9A6 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
LRRC40Q9H9A6 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
LRRC40Q9H9A6 METTL5-202ENST00000308099 629 ntTSL 3 BASIC5.81□□□□□ -1.48
LRRC40Q9H9A6 HIST1H3PS1-201ENST00000404612 417 ntBASIC5.81□□□□□ -1.48
LRRC40Q9H9A6 AL445213.1-201ENST00000412589 747 ntBASIC5.81□□□□□ -1.48
LRRC40Q9H9A6 AL158827.1-201ENST00000416300 391 ntBASIC5.81□□□□□ -1.48
LRRC40Q9H9A6 OR10T1P-201ENST00000424327 947 ntBASIC5.81□□□□□ -1.48
LRRC40Q9H9A6 MRPS21P2-201ENST00000424704 264 ntBASIC5.81□□□□□ -1.48
LRRC40Q9H9A6 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC5.81□□□□□ -1.48
LRRC40Q9H9A6 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC5.81□□□□□ -1.48
LRRC40Q9H9A6 AP002884.1-201ENST00000479691 655 ntBASIC5.81□□□□□ -1.48
LRRC40Q9H9A6 RN7SL570P-201ENST00000484405 292 ntBASIC5.81□□□□□ -1.48
LRRC40Q9H9A6 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
LRRC40Q9H9A6 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC5.81□□□□□ -1.48
LRRC40Q9H9A6 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC5.81□□□□□ -1.48
LRRC40Q9H9A6 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC5.81□□□□□ -1.48
LRRC40Q9H9A6 Vault.2-201ENST00000516519 98 ntBASIC5.81□□□□□ -1.48
LRRC40Q9H9A6 RNA5SP438-201ENST00000516561 112 ntBASIC5.81□□□□□ -1.48
LRRC40Q9H9A6 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC5.81□□□□□ -1.48
LRRC40Q9H9A6 IFNG-AS1-203ENST00000541715 902 ntTSL 3 BASIC5.81□□□□□ -1.48
LRRC40Q9H9A6 AC139697.1-201ENST00000548429 745 ntBASIC5.81□□□□□ -1.48
LRRC40Q9H9A6 AC096996.1-201ENST00000563813 325 ntBASIC5.81□□□□□ -1.48
LRRC40Q9H9A6 AC009167.1-201ENST00000568317 579 ntTSL 4 BASIC5.81□□□□□ -1.48
LRRC40Q9H9A6 AC136443.4-201ENST00000568759 579 ntTSL 4 BASIC5.81□□□□□ -1.48
LRRC40Q9H9A6 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC5.81□□□□□ -1.48
LRRC40Q9H9A6 ZNF235-204ENST00000589799 955 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
LRRC40Q9H9A6 MIR6780B-201ENST00000610307 79 ntBASIC5.81□□□□□ -1.48
LRRC40Q9H9A6 AC073593.1-201ENST00000624500 411 ntBASIC5.81□□□□□ -1.48
LRRC40Q9H9A6 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
LRRC40Q9H9A6 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
LRRC40Q9H9A6 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
LRRC40Q9H9A6 AL121839.2-201ENST00000565058 6943 ntBASIC5.81□□□□□ -1.48
LRRC40Q9H9A6 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.81□□□□□ -1.48
LRRC40Q9H9A6 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
LRRC40Q9H9A6 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
LRRC40Q9H9A6 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
LRRC40Q9H9A6 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
LRRC40Q9H9A6 EEF1A1P33-201ENST00000554413 1362 ntBASIC5.8□□□□□ -1.48
LRRC40Q9H9A6 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
LRRC40Q9H9A6 AC092451.3-201ENST00000625067 1343 ntBASIC5.8□□□□□ -1.48
LRRC40Q9H9A6 AC011503.2-201ENST00000594230 1500 ntBASIC5.8□□□□□ -1.48
LRRC40Q9H9A6 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
LRRC40Q9H9A6 SH3BGRL-201ENST00000373212 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
LRRC40Q9H9A6 AC093671.1-201ENST00000624981 2929 ntBASIC5.8□□□□□ -1.48
LRRC40Q9H9A6 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
LRRC40Q9H9A6 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
LRRC40Q9H9A6 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
LRRC40Q9H9A6 SUGT1P2-201ENST00000379452 992 ntBASIC5.8□□□□□ -1.48
LRRC40Q9H9A6 AC004386.1-201ENST00000393214 761 ntBASIC5.8□□□□□ -1.48
LRRC40Q9H9A6 AC007068.1-201ENST00000396690 844 ntBASIC5.8□□□□□ -1.48
LRRC40Q9H9A6 DPPA2P2-201ENST00000418220 897 ntBASIC5.8□□□□□ -1.48
LRRC40Q9H9A6 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC5.8□□□□□ -1.48
LRRC40Q9H9A6 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC5.8□□□□□ -1.48
LRRC40Q9H9A6 RPL5P2-201ENST00000429598 854 ntBASIC5.8□□□□□ -1.48
LRRC40Q9H9A6 BX276092.6-201ENST00000430476 250 ntBASIC5.8□□□□□ -1.48
LRRC40Q9H9A6 AC099670.2-201ENST00000435130 321 ntBASIC5.8□□□□□ -1.48
LRRC40Q9H9A6 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC5.8□□□□□ -1.48
LRRC40Q9H9A6 GAPDHP48-201ENST00000436626 961 ntBASIC5.8□□□□□ -1.48
LRRC40Q9H9A6 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC5.8□□□□□ -1.48
LRRC40Q9H9A6 BX276092.8-201ENST00000455722 250 ntBASIC5.8□□□□□ -1.48
LRRC40Q9H9A6 AC108751.3-201ENST00000461814 1020 ntBASIC5.8□□□□□ -1.48
LRRC40Q9H9A6 RPS17P15-201ENST00000475609 349 ntBASIC5.8□□□□□ -1.48
LRRC40Q9H9A6 AC239584.1-201ENST00000510419 732 ntTSL 5 BASIC5.8□□□□□ -1.48
LRRC40Q9H9A6 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC5.8□□□□□ -1.48
LRRC40Q9H9A6 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC5.8□□□□□ -1.48
LRRC40Q9H9A6 IGLV3-30-201ENST00000524362 298 ntBASIC5.8□□□□□ -1.48
LRRC40Q9H9A6 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC5.8□□□□□ -1.48
LRRC40Q9H9A6 AP000648.1-201ENST00000529682 397 ntBASIC5.8□□□□□ -1.48
LRRC40Q9H9A6 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC5.8□□□□□ -1.48
LRRC40Q9H9A6 LINC02463-201ENST00000546414 497 ntTSL 3 BASIC5.8□□□□□ -1.48
LRRC40Q9H9A6 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC5.8□□□□□ -1.48
LRRC40Q9H9A6 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC5.8□□□□□ -1.48
LRRC40Q9H9A6 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC5.8□□□□□ -1.48
LRRC40Q9H9A6 RMDN2-AS1-203ENST00000601029 613 ntTSL 5 BASIC5.8□□□□□ -1.48
LRRC40Q9H9A6 AL031601.1-201ENST00000605702 394 ntBASIC5.8□□□□□ -1.48
LRRC40Q9H9A6 AC090607.5-201ENST00000615692 224 ntBASIC5.8□□□□□ -1.48
LRRC40Q9H9A6 AC022919.1-201ENST00000624979 626 ntBASIC5.8□□□□□ -1.48
LRRC40Q9H9A6 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
LRRC40Q9H9A6 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
LRRC40Q9H9A6 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC5.8□□□□□ -1.48
LRRC40Q9H9A6 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
LRRC40Q9H9A6 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC5.8□□□□□ -1.48
LRRC40Q9H9A6 AC093909.5-201ENST00000621839 1799 ntBASIC5.8□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 119.4 ms