Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 AL161912.4-201ENST00000623889 2468 ntBASIC6.84□□□□□ -1.32
UPF3BQ9BZI7 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC6.84□□□□□ -1.32
UPF3BQ9BZI7 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.32
UPF3BQ9BZI7 LINC01958-201ENST00000637749 1941 ntTSL 5 BASIC6.84□□□□□ -1.32
UPF3BQ9BZI7 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC6.83□□□□□ -1.32
UPF3BQ9BZI7 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
UPF3BQ9BZI7 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
UPF3BQ9BZI7 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
UPF3BQ9BZI7 AC117409.1-201ENST00000470499 1310 ntBASIC6.83□□□□□ -1.32
UPF3BQ9BZI7 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC6.83□□□□□ -1.32
UPF3BQ9BZI7 AC068870.1-201ENST00000563737 2455 ntBASIC6.83□□□□□ -1.32
UPF3BQ9BZI7 RNA5SP443-201ENST00000363083 132 ntBASIC6.83□□□□□ -1.32
UPF3BQ9BZI7 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
UPF3BQ9BZI7 RNU6-316P-201ENST00000391027 107 ntBASIC6.83□□□□□ -1.32
UPF3BQ9BZI7 RPL11P3-201ENST00000395256 523 ntBASIC6.83□□□□□ -1.32
UPF3BQ9BZI7 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC6.83□□□□□ -1.32
UPF3BQ9BZI7 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC6.83□□□□□ -1.32
UPF3BQ9BZI7 BX510359.3-201ENST00000422168 306 ntBASIC6.83□□□□□ -1.32
UPF3BQ9BZI7 BX323845.3-201ENST00000428215 527 ntBASIC6.83□□□□□ -1.32
UPF3BQ9BZI7 CDY8P-201ENST00000428380 1279 ntBASIC6.83□□□□□ -1.32
UPF3BQ9BZI7 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC6.83□□□□□ -1.32
UPF3BQ9BZI7 VN1R110P-201ENST00000438988 971 ntBASIC6.83□□□□□ -1.32
UPF3BQ9BZI7 CDY20P-201ENST00000447528 1279 ntBASIC6.83□□□□□ -1.32
UPF3BQ9BZI7 OR7E116P-201ENST00000448529 957 ntBASIC6.83□□□□□ -1.32
UPF3BQ9BZI7 HLA-DPA3-207ENST00000454398 229 ntBASIC6.83□□□□□ -1.32
UPF3BQ9BZI7 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC6.83□□□□□ -1.32
UPF3BQ9BZI7 SETP21-201ENST00000514799 892 ntBASIC6.83□□□□□ -1.32
UPF3BQ9BZI7 SCARNA18.1-201ENST00000516330 83 ntBASIC6.83□□□□□ -1.32
UPF3BQ9BZI7 WBP1LP3-201ENST00000523033 208 ntBASIC6.83□□□□□ -1.32
UPF3BQ9BZI7 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
UPF3BQ9BZI7 PCNAP4-201ENST00000532690 730 ntBASIC6.83□□□□□ -1.32
UPF3BQ9BZI7 AC027544.3-201ENST00000535082 757 ntBASIC6.83□□□□□ -1.32
UPF3BQ9BZI7 AC007956.1-201ENST00000555623 542 ntBASIC6.83□□□□□ -1.32
UPF3BQ9BZI7 MRO-208ENST00000588444 866 ntTSL 3 BASIC6.83□□□□□ -1.32
UPF3BQ9BZI7 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC6.83□□□□□ -1.32
UPF3BQ9BZI7 AC211433.2-201ENST00000608433 387 ntBASIC6.83□□□□□ -1.32
UPF3BQ9BZI7 AL136295.6-201ENST00000610486 658 ntBASIC6.83□□□□□ -1.32
UPF3BQ9BZI7 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC6.83□□□□□ -1.32
UPF3BQ9BZI7 WDR75-207ENST00000631047 270 ntTSL 5 BASIC6.83□□□□□ -1.32
UPF3BQ9BZI7 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
UPF3BQ9BZI7 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
UPF3BQ9BZI7 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
UPF3BQ9BZI7 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC6.83□□□□□ -1.32
UPF3BQ9BZI7 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC6.83□□□□□ -1.32
UPF3BQ9BZI7 LINC02523-201ENST00000423208 2963 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
UPF3BQ9BZI7 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
UPF3BQ9BZI7 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC6.83□□□□□ -1.32
UPF3BQ9BZI7 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
UPF3BQ9BZI7 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC6.83□□□□□ -1.32
UPF3BQ9BZI7 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC6.82□□□□□ -1.32
UPF3BQ9BZI7 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC6.82□□□□□ -1.32
UPF3BQ9BZI7 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC6.82□□□□□ -1.32
UPF3BQ9BZI7 LINC00907-201ENST00000585627 3324 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
UPF3BQ9BZI7 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
UPF3BQ9BZI7 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC6.82□□□□□ -1.32
UPF3BQ9BZI7 AL137058.3-201ENST00000624531 3099 ntBASIC6.82□□□□□ -1.32
UPF3BQ9BZI7 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
UPF3BQ9BZI7 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
UPF3BQ9BZI7 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
UPF3BQ9BZI7 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
UPF3BQ9BZI7 RNA5SP326-201ENST00000363209 110 ntBASIC6.82□□□□□ -1.32
UPF3BQ9BZI7 RNA5SP242-201ENST00000364171 118 ntBASIC6.82□□□□□ -1.32
UPF3BQ9BZI7 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC6.82□□□□□ -1.32
UPF3BQ9BZI7 RNU1-136P-201ENST00000384181 164 ntBASIC6.82□□□□□ -1.32
UPF3BQ9BZI7 AC096921.1-201ENST00000411661 375 ntBASIC6.82□□□□□ -1.32
UPF3BQ9BZI7 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC6.82□□□□□ -1.32
UPF3BQ9BZI7 AL354868.1-201ENST00000417077 482 ntBASIC6.82□□□□□ -1.32
UPF3BQ9BZI7 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC6.82□□□□□ -1.32
UPF3BQ9BZI7 NME1P1-201ENST00000420914 382 ntBASIC6.82□□□□□ -1.32
UPF3BQ9BZI7 AL121776.1-201ENST00000429337 372 ntBASIC6.82□□□□□ -1.32
UPF3BQ9BZI7 AC099670.2-201ENST00000435130 321 ntBASIC6.82□□□□□ -1.32
UPF3BQ9BZI7 NDUFS5P5-201ENST00000437256 321 ntBASIC6.82□□□□□ -1.32
UPF3BQ9BZI7 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC6.82□□□□□ -1.32
UPF3BQ9BZI7 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC6.82□□□□□ -1.32
UPF3BQ9BZI7 RPS7P6-201ENST00000485777 579 ntBASIC6.82□□□□□ -1.32
UPF3BQ9BZI7 AL136038.1-201ENST00000497246 351 ntBASIC6.82□□□□□ -1.32
UPF3BQ9BZI7 OR5H7P-201ENST00000514084 930 ntBASIC6.82□□□□□ -1.32
UPF3BQ9BZI7 Y_RNA.667-201ENST00000516212 107 ntBASIC6.82□□□□□ -1.32
UPF3BQ9BZI7 RNA5SP438-201ENST00000516561 112 ntBASIC6.82□□□□□ -1.32
UPF3BQ9BZI7 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC6.82□□□□□ -1.32
UPF3BQ9BZI7 IGHVIII-47-1-201ENST00000518187 331 ntBASIC6.82□□□□□ -1.32
UPF3BQ9BZI7 TPT1-AS1-206ENST00000519454 709 ntTSL 5 BASIC6.82□□□□□ -1.32
UPF3BQ9BZI7 AP003396.4-201ENST00000527574 265 ntBASIC6.82□□□□□ -1.32
UPF3BQ9BZI7 AC139697.1-201ENST00000548429 745 ntBASIC6.82□□□□□ -1.32
UPF3BQ9BZI7 AL356801.1-201ENST00000559320 294 ntBASIC6.82□□□□□ -1.32
UPF3BQ9BZI7 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC6.82□□□□□ -1.32
UPF3BQ9BZI7 AC096996.1-201ENST00000563813 325 ntBASIC6.82□□□□□ -1.32
UPF3BQ9BZI7 LINC00556-201ENST00000569603 412 ntBASIC6.82□□□□□ -1.32
UPF3BQ9BZI7 MIR3176-201ENST00000582210 90 ntBASIC6.82□□□□□ -1.32
UPF3BQ9BZI7 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC6.82□□□□□ -1.32
UPF3BQ9BZI7 RPL12P48-201ENST00000605620 304 ntBASIC6.82□□□□□ -1.32
UPF3BQ9BZI7 FAM72A-208ENST00000607379 1139 ntBASIC6.82□□□□□ -1.32
UPF3BQ9BZI7 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
UPF3BQ9BZI7 AC009120.7-201ENST00000623452 780 ntBASIC6.82□□□□□ -1.32
UPF3BQ9BZI7 BX284613.1-201ENST00000452221 1641 ntBASIC6.82□□□□□ -1.32
UPF3BQ9BZI7 SLC35F1-202ENST00000621341 4481 ntAPPRIS ALT2 TSL 5 BASIC6.82□□□□□ -1.32
UPF3BQ9BZI7 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
UPF3BQ9BZI7 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC6.82□□□□□ -1.32
UPF3BQ9BZI7 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
UPF3BQ9BZI7 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC6.82□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 73.4 ms