Protein–RNA interactions for Protein: Q9BWF2

TRAIP, E3 ubiquitin-protein ligase TRAIP, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIPQ9BWF2 AL445523.1-201ENST00000451184 1362 ntBASIC7.83□□□□□ -1.16
TRAIPQ9BWF2 UTY-212ENST00000545955 6817 ntAPPRIS P5 TSL 1 (best) BASIC7.83□□□□□ -1.16
TRAIPQ9BWF2 ASNSP1-204ENST00000641977 1664 ntBASIC7.83□□□□□ -1.16
TRAIPQ9BWF2 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC7.82□□□□□ -1.16
TRAIPQ9BWF2 SYNPO2-203ENST00000434046 3588 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
TRAIPQ9BWF2 ADGRL3-206ENST00000507164 4982 ntTSL 5 BASIC7.82□□□□□ -1.16
TRAIPQ9BWF2 METTL8-217ENST00000612742 8132 ntAPPRIS P1 TSL 2 BASIC7.82□□□□□ -1.16
TRAIPQ9BWF2 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC7.82□□□□□ -1.16
TRAIPQ9BWF2 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC7.82□□□□□ -1.16
TRAIPQ9BWF2 LRRC31-201ENST00000264676 2355 ntAPPRIS ALT2 TSL 2 BASIC7.82□□□□□ -1.16
TRAIPQ9BWF2 RBM23-203ENST00000359890 10040 ntAPPRIS P4 TSL 1 (best) BASIC7.82□□□□□ -1.16
TRAIPQ9BWF2 DPPA4-201ENST00000335658 2817 ntAPPRIS P2 TSL 1 (best) BASIC7.82□□□□□ -1.16
TRAIPQ9BWF2 STARD4-AS1-201ENST00000500779 5525 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
TRAIPQ9BWF2 PRKAA1-201ENST00000296800 1134 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
TRAIPQ9BWF2 RN7SKP55-201ENST00000364888 307 ntBASIC7.82□□□□□ -1.16
TRAIPQ9BWF2 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC7.82□□□□□ -1.16
TRAIPQ9BWF2 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC7.82□□□□□ -1.16
TRAIPQ9BWF2 MIR99A-201ENST00000384906 81 ntBASIC7.82□□□□□ -1.16
TRAIPQ9BWF2 IGKC-201ENST00000390237 523 ntAPPRIS P1 BASIC7.82□□□□□ -1.16
TRAIPQ9BWF2 TRBV25-1-202ENST00000390398 381 ntAPPRIS P1 BASIC7.82□□□□□ -1.16
TRAIPQ9BWF2 AL360271.1-201ENST00000395679 510 ntBASIC7.82□□□□□ -1.16
TRAIPQ9BWF2 PDCL3P5-201ENST00000398028 722 ntBASIC7.82□□□□□ -1.16
TRAIPQ9BWF2 RNA5SP80-201ENST00000410475 111 ntBASIC7.82□□□□□ -1.16
TRAIPQ9BWF2 MYO5BP3-201ENST00000431872 1279 ntBASIC7.82□□□□□ -1.16
TRAIPQ9BWF2 AL022324.2-201ENST00000434827 780 ntBASIC7.82□□□□□ -1.16
TRAIPQ9BWF2 PA2G4P1-201ENST00000442248 1197 ntBASIC7.82□□□□□ -1.16
TRAIPQ9BWF2 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC7.82□□□□□ -1.16
TRAIPQ9BWF2 AC067817.2-201ENST00000459965 387 ntTSL 3 BASIC7.82□□□□□ -1.16
TRAIPQ9BWF2 AC117395.2-201ENST00000463122 1128 ntBASIC7.82□□□□□ -1.16
TRAIPQ9BWF2 ADAM3A-207ENST00000490268 2627 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
TRAIPQ9BWF2 RAB7A-208ENST00000493186 329 ntTSL 5 BASIC7.82□□□□□ -1.16
TRAIPQ9BWF2 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC7.82□□□□□ -1.16
TRAIPQ9BWF2 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC7.82□□□□□ -1.16
TRAIPQ9BWF2 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC7.82□□□□□ -1.16
TRAIPQ9BWF2 AC111000.2-201ENST00000507775 550 ntBASIC7.82□□□□□ -1.16
TRAIPQ9BWF2 AC048346.1-201ENST00000510247 144 ntBASIC7.82□□□□□ -1.16
TRAIPQ9BWF2 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC7.82□□□□□ -1.16
TRAIPQ9BWF2 SMG1P4-203ENST00000517529 1589 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
TRAIPQ9BWF2 AC103831.1-201ENST00000522228 422 ntTSL 3 BASIC7.82□□□□□ -1.16
TRAIPQ9BWF2 AC013546.1-201ENST00000523232 564 ntTSL 4 BASIC7.82□□□□□ -1.16
TRAIPQ9BWF2 AC018953.1-201ENST00000523265 730 ntTSL 2 BASIC7.82□□□□□ -1.16
TRAIPQ9BWF2 AL355075.1-201ENST00000528210 468 ntTSL 2 BASIC7.82□□□□□ -1.16
TRAIPQ9BWF2 BBOX1-204ENST00000528583 1724 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
TRAIPQ9BWF2 LPAR1-205ENST00000541779 2490 ntAPPRIS ALT1 TSL 1 (best) BASIC7.82□□□□□ -1.16
TRAIPQ9BWF2 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC7.82□□□□□ -1.16
TRAIPQ9BWF2 AC079075.2-201ENST00000557964 449 ntTSL 4 BASIC7.82□□□□□ -1.16
TRAIPQ9BWF2 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC7.82□□□□□ -1.16
TRAIPQ9BWF2 RN7SL366P-201ENST00000577957 292 ntBASIC7.82□□□□□ -1.16
TRAIPQ9BWF2 AC010761.3-201ENST00000578819 499 ntTSL 3 BASIC7.82□□□□□ -1.16
TRAIPQ9BWF2 OR4K7P-201ENST00000580232 945 ntBASIC7.82□□□□□ -1.16
TRAIPQ9BWF2 CCL2-202ENST00000580907 736 ntTSL 2 BASIC7.82□□□□□ -1.16
TRAIPQ9BWF2 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC7.82□□□□□ -1.16
TRAIPQ9BWF2 AP004247.3-201ENST00000608682 624 ntBASIC7.82□□□□□ -1.16
TRAIPQ9BWF2 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC7.82□□□□□ -1.16
TRAIPQ9BWF2 AC011939.3-201ENST00000613686 466 ntBASIC7.82□□□□□ -1.16
TRAIPQ9BWF2 AC023158.2-201ENST00000614876 543 ntBASIC7.82□□□□□ -1.16
TRAIPQ9BWF2 AL138693.1-201ENST00000622219 129 ntBASIC7.82□□□□□ -1.16
TRAIPQ9BWF2 AC130448.2-201ENST00000624082 374 ntBASIC7.82□□□□□ -1.16
TRAIPQ9BWF2 AC116618.1-201ENST00000634617 774 ntBASIC7.82□□□□□ -1.16
TRAIPQ9BWF2 MAPK10-357ENST00000641831 2858 ntBASIC7.82□□□□□ -1.16
TRAIPQ9BWF2 ANO6-201ENST00000320560 5975 ntAPPRIS P3 TSL 1 (best) BASIC7.82□□□□□ -1.16
TRAIPQ9BWF2 ADAMTS9-AS2-202ENST00000474768 2388 ntTSL 2 BASIC7.82□□□□□ -1.16
TRAIPQ9BWF2 NLGN4X-202ENST00000381092 3750 ntAPPRIS P2 TSL 2 BASIC7.82□□□□□ -1.16
TRAIPQ9BWF2 DRP2-204ENST00000538510 6852 ntAPPRIS P3 TSL 2 BASIC7.82□□□□□ -1.16
TRAIPQ9BWF2 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC7.81□□□□□ -1.16
TRAIPQ9BWF2 OR10A2-202ENST00000641461 5390 ntAPPRIS P1 BASIC7.81□□□□□ -1.16
TRAIPQ9BWF2 AC087430.1-201ENST00000451707 3699 ntTSL 2 BASIC7.81□□□□□ -1.16
TRAIPQ9BWF2 VEPH1-201ENST00000362010 4202 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
TRAIPQ9BWF2 TPD52-203ENST00000448733 4339 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
TRAIPQ9BWF2 FBXW10-201ENST00000301938 3221 ntAPPRIS ALT2 TSL 1 (best) BASIC7.81□□□□□ -1.16
TRAIPQ9BWF2 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC7.81□□□□□ -1.16
TRAIPQ9BWF2 SSR1-201ENST00000244763 9669 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
TRAIPQ9BWF2 DYNC1I2P1-201ENST00000435916 1838 ntBASIC7.81□□□□□ -1.16
TRAIPQ9BWF2 BANF2-201ENST00000246090 595 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
TRAIPQ9BWF2 SPAG11B-201ENST00000297498 795 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
TRAIPQ9BWF2 TMEM31-201ENST00000319560 728 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
TRAIPQ9BWF2 RN7SKP174-201ENST00000363803 330 ntBASIC7.81□□□□□ -1.16
TRAIPQ9BWF2 RNU6-304P-201ENST00000364855 107 ntBASIC7.81□□□□□ -1.16
TRAIPQ9BWF2 ATP5E-203ENST00000395663 697 ntAPPRIS P1 TSL 2 BASIC7.81□□□□□ -1.16
TRAIPQ9BWF2 RSL24D1P4-201ENST00000400938 484 ntBASIC7.81□□□□□ -1.16
TRAIPQ9BWF2 MOB4-205ENST00000409916 829 ntTSL 3 BASIC7.81□□□□□ -1.16
TRAIPQ9BWF2 RNU6-272P-201ENST00000411028 104 ntBASIC7.81□□□□□ -1.16
TRAIPQ9BWF2 MKX-AS1-201ENST00000412244 745 ntTSL 3 BASIC7.81□□□□□ -1.16
TRAIPQ9BWF2 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC7.81□□□□□ -1.16
TRAIPQ9BWF2 GEMIN2P2-201ENST00000418195 715 ntBASIC7.81□□□□□ -1.16
TRAIPQ9BWF2 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC7.81□□□□□ -1.16
TRAIPQ9BWF2 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC7.81□□□□□ -1.16
TRAIPQ9BWF2 AC004074.1-201ENST00000421810 1063 ntBASIC7.81□□□□□ -1.16
TRAIPQ9BWF2 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC7.81□□□□□ -1.16
TRAIPQ9BWF2 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC7.81□□□□□ -1.16
TRAIPQ9BWF2 AL034397.2-201ENST00000424241 857 ntTSL 2 BASIC7.81□□□□□ -1.16
TRAIPQ9BWF2 DUTP4-201ENST00000424782 475 ntBASIC7.81□□□□□ -1.16
TRAIPQ9BWF2 SNRPEP5-201ENST00000425442 278 ntBASIC7.81□□□□□ -1.16
TRAIPQ9BWF2 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC7.81□□□□□ -1.16
TRAIPQ9BWF2 AL445567.1-201ENST00000439121 144 ntBASIC7.81□□□□□ -1.16
TRAIPQ9BWF2 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC7.81□□□□□ -1.16
TRAIPQ9BWF2 LINC01795-201ENST00000454367 813 ntTSL 3 BASIC7.81□□□□□ -1.16
TRAIPQ9BWF2 PSPC1P2-201ENST00000455130 225 ntBASIC7.81□□□□□ -1.16
TRAIPQ9BWF2 CEACAMP11-201ENST00000455211 583 ntBASIC7.81□□□□□ -1.16
TRAIPQ9BWF2 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC7.81□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 97.4 ms