Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
CDK5RAP1Q96SZ6 PKIA-201ENST00000352966 1736 ntAPPRIS P1 TSL 2 BASIC6.56□□□□□ -1.36
CDK5RAP1Q96SZ6 AC006213.6-201ENST00000623722 4179 ntBASIC6.56□□□□□ -1.36
CDK5RAP1Q96SZ6 L3MBTL3-209ENST00000533560 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
CDK5RAP1Q96SZ6 POM121L2-202ENST00000444565 3108 ntAPPRIS P2 BASIC6.56□□□□□ -1.36
CDK5RAP1Q96SZ6 AL589655.1-201ENST00000405398 482 ntBASIC6.56□□□□□ -1.36
CDK5RAP1Q96SZ6 AL138880.1-201ENST00000405824 642 ntBASIC6.56□□□□□ -1.36
CDK5RAP1Q96SZ6 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC6.56□□□□□ -1.36
CDK5RAP1Q96SZ6 RN7SKP121-201ENST00000410842 305 ntBASIC6.56□□□□□ -1.36
CDK5RAP1Q96SZ6 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
CDK5RAP1Q96SZ6 AC019205.1-201ENST00000421830 730 ntBASIC6.56□□□□□ -1.36
CDK5RAP1Q96SZ6 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
CDK5RAP1Q96SZ6 MTCO1P51-201ENST00000427672 1060 ntBASIC6.56□□□□□ -1.36
CDK5RAP1Q96SZ6 PRELID3BP10-201ENST00000431957 584 ntBASIC6.56□□□□□ -1.36
CDK5RAP1Q96SZ6 LINC01781-202ENST00000443104 591 ntTSL 2 BASIC6.56□□□□□ -1.36
CDK5RAP1Q96SZ6 AC139712.3-201ENST00000443926 639 ntTSL 2 BASIC6.56□□□□□ -1.36
CDK5RAP1Q96SZ6 MOB1AP2-201ENST00000446060 614 ntBASIC6.56□□□□□ -1.36
CDK5RAP1Q96SZ6 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC6.56□□□□□ -1.36
CDK5RAP1Q96SZ6 HIGD1AP16-201ENST00000450986 258 ntBASIC6.56□□□□□ -1.36
CDK5RAP1Q96SZ6 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
CDK5RAP1Q96SZ6 AC009963.3-201ENST00000458090 486 ntBASIC6.56□□□□□ -1.36
CDK5RAP1Q96SZ6 AC104339.1-201ENST00000465478 348 ntBASIC6.56□□□□□ -1.36
CDK5RAP1Q96SZ6 AC078857.1-201ENST00000469870 667 ntBASIC6.56□□□□□ -1.36
CDK5RAP1Q96SZ6 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC6.56□□□□□ -1.36
CDK5RAP1Q96SZ6 AC010486.2-201ENST00000505572 483 ntBASIC6.56□□□□□ -1.36
CDK5RAP1Q96SZ6 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC6.56□□□□□ -1.36
CDK5RAP1Q96SZ6 AC090958.1-201ENST00000511122 351 ntBASIC6.56□□□□□ -1.36
CDK5RAP1Q96SZ6 AC010625.1-201ENST00000511296 403 ntBASIC6.56□□□□□ -1.36
CDK5RAP1Q96SZ6 HMGN1P17-201ENST00000513734 295 ntBASIC6.56□□□□□ -1.36
CDK5RAP1Q96SZ6 RNU6-1102P-201ENST00000516149 96 ntBASIC6.56□□□□□ -1.36
CDK5RAP1Q96SZ6 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC6.56□□□□□ -1.36
CDK5RAP1Q96SZ6 AC027369.2-201ENST00000528030 440 ntBASIC6.56□□□□□ -1.36
CDK5RAP1Q96SZ6 PTER-205ENST00000535784 1203 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
CDK5RAP1Q96SZ6 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC6.56□□□□□ -1.36
CDK5RAP1Q96SZ6 AC078789.1-201ENST00000547084 477 ntTSL 3 BASIC6.56□□□□□ -1.36
CDK5RAP1Q96SZ6 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC6.56□□□□□ -1.36
CDK5RAP1Q96SZ6 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC6.56□□□□□ -1.36
CDK5RAP1Q96SZ6 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC6.56□□□□□ -1.36
CDK5RAP1Q96SZ6 STARD6-202ENST00000577499 696 ntTSL 2 BASIC6.56□□□□□ -1.36
CDK5RAP1Q96SZ6 AC016839.1-201ENST00000578162 867 ntBASIC6.56□□□□□ -1.36
CDK5RAP1Q96SZ6 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC6.56□□□□□ -1.36
CDK5RAP1Q96SZ6 AC008536.1-201ENST00000602872 669 ntBASIC6.56□□□□□ -1.36
CDK5RAP1Q96SZ6 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC6.56□□□□□ -1.36
CDK5RAP1Q96SZ6 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC6.56□□□□□ -1.36
CDK5RAP1Q96SZ6 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC6.56□□□□□ -1.36
CDK5RAP1Q96SZ6 AC006927.3-201ENST00000638789 384 ntBASIC6.56□□□□□ -1.36
CDK5RAP1Q96SZ6 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC6.56□□□□□ -1.36
CDK5RAP1Q96SZ6 TTC41P-205ENST00000551270 3963 ntBASIC6.56□□□□□ -1.36
CDK5RAP1Q96SZ6 CPNE3-203ENST00000517490 4865 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
CDK5RAP1Q96SZ6 DLG2-230ENST00000532653 2891 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
CDK5RAP1Q96SZ6 MYBL1-206ENST00000524176 2148 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
CDK5RAP1Q96SZ6 AC007744.1-201ENST00000607540 2289 ntTSL 5 BASIC6.56□□□□□ -1.36
CDK5RAP1Q96SZ6 ZC3H11A-201ENST00000332127 5015 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
CDK5RAP1Q96SZ6 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
CDK5RAP1Q96SZ6 LINGO2-202ENST00000379992 3044 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
CDK5RAP1Q96SZ6 CDC7-201ENST00000234626 3173 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
CDK5RAP1Q96SZ6 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC6.55□□□□□ -1.36
CDK5RAP1Q96SZ6 NSD3-206ENST00000527502 4471 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
CDK5RAP1Q96SZ6 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
CDK5RAP1Q96SZ6 MAPK10-261ENST00000641050 3109 ntBASIC6.55□□□□□ -1.36
CDK5RAP1Q96SZ6 CR382285.2-201ENST00000624662 1495 ntBASIC6.55□□□□□ -1.36
CDK5RAP1Q96SZ6 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
CDK5RAP1Q96SZ6 MKL2-202ENST00000571589 8799 ntAPPRIS ALT2 TSL 2 BASIC6.55□□□□□ -1.36
CDK5RAP1Q96SZ6 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
CDK5RAP1Q96SZ6 ACPP-202ENST00000351273 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
CDK5RAP1Q96SZ6 DPY19L1P1-201ENST00000417811 2594 ntBASIC6.55□□□□□ -1.36
CDK5RAP1Q96SZ6 PHEX-AS1-201ENST00000424650 1906 ntTSL 2 BASIC6.55□□□□□ -1.36
CDK5RAP1Q96SZ6 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
CDK5RAP1Q96SZ6 STAG3L4-201ENST00000352103 530 ntBASIC6.55□□□□□ -1.36
CDK5RAP1Q96SZ6 SNORA11.5-201ENST00000408163 128 ntBASIC6.55□□□□□ -1.36
CDK5RAP1Q96SZ6 MTCO3P4-201ENST00000419236 787 ntBASIC6.55□□□□□ -1.36
CDK5RAP1Q96SZ6 AL445224.1-201ENST00000420595 737 ntTSL 5 BASIC6.55□□□□□ -1.36
CDK5RAP1Q96SZ6 AC007064.3-201ENST00000422608 359 ntBASIC6.55□□□□□ -1.36
CDK5RAP1Q96SZ6 AKR1B10P1-201ENST00000425765 942 ntBASIC6.55□□□□□ -1.36
CDK5RAP1Q96SZ6 AL354707.3-201ENST00000427308 331 ntBASIC6.55□□□□□ -1.36
CDK5RAP1Q96SZ6 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC6.55□□□□□ -1.36
CDK5RAP1Q96SZ6 MRPS21P3-201ENST00000436696 262 ntBASIC6.55□□□□□ -1.36
CDK5RAP1Q96SZ6 AC092162.2-201ENST00000438143 532 ntTSL 4 BASIC6.55□□□□□ -1.36
CDK5RAP1Q96SZ6 OR3D1P-201ENST00000438288 955 ntBASIC6.55□□□□□ -1.36
CDK5RAP1Q96SZ6 PPIAP10-201ENST00000438675 458 ntBASIC6.55□□□□□ -1.36
CDK5RAP1Q96SZ6 GK-IT1-201ENST00000441146 397 ntTSL 5 BASIC6.55□□□□□ -1.36
CDK5RAP1Q96SZ6 OR13K1P-201ENST00000444577 975 ntBASIC6.55□□□□□ -1.36
CDK5RAP1Q96SZ6 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC6.55□□□□□ -1.36
CDK5RAP1Q96SZ6 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC6.55□□□□□ -1.36
CDK5RAP1Q96SZ6 AL133351.3-201ENST00000454998 193 ntBASIC6.55□□□□□ -1.36
CDK5RAP1Q96SZ6 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC6.55□□□□□ -1.36
CDK5RAP1Q96SZ6 UCK2-205ENST00000469256 753 ntTSL 3 BASIC6.55□□□□□ -1.36
CDK5RAP1Q96SZ6 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC6.55□□□□□ -1.36
CDK5RAP1Q96SZ6 AC104779.1-201ENST00000503557 441 ntTSL 3 BASIC6.55□□□□□ -1.36
CDK5RAP1Q96SZ6 SNX18P24-201ENST00000505249 671 ntBASIC6.55□□□□□ -1.36
CDK5RAP1Q96SZ6 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC6.55□□□□□ -1.36
CDK5RAP1Q96SZ6 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC6.55□□□□□ -1.36
CDK5RAP1Q96SZ6 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
CDK5RAP1Q96SZ6 AC239584.1-201ENST00000510419 732 ntTSL 5 BASIC6.55□□□□□ -1.36
CDK5RAP1Q96SZ6 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
CDK5RAP1Q96SZ6 PRMT5P1-201ENST00000514351 598 ntBASIC6.55□□□□□ -1.36
CDK5RAP1Q96SZ6 MTCO3P27-201ENST00000514397 196 ntBASIC6.55□□□□□ -1.36
CDK5RAP1Q96SZ6 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
CDK5RAP1Q96SZ6 Vault.2-201ENST00000516519 98 ntBASIC6.55□□□□□ -1.36
CDK5RAP1Q96SZ6 AC246817.1-201ENST00000520024 610 ntTSL 3 BASIC6.55□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 379.2 ms