Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 AP001803.1-201ENST00000525668 147 ntBASIC8.44□□□□□ -1.06
TRIM47Q96LD4 AC006205.1-201ENST00000538067 389 ntTSL 2 BASIC8.44□□□□□ -1.06
TRIM47Q96LD4 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC8.44□□□□□ -1.06
TRIM47Q96LD4 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC8.44□□□□□ -1.06
TRIM47Q96LD4 AC009063.1-201ENST00000563342 702 ntBASIC8.44□□□□□ -1.06
TRIM47Q96LD4 AC012414.6-201ENST00000568241 401 ntBASIC8.44□□□□□ -1.06
TRIM47Q96LD4 RBM4-213ENST00000578778 582 ntTSL 4 BASIC8.44□□□□□ -1.06
TRIM47Q96LD4 AC015688.2-201ENST00000584523 262 ntBASIC8.44□□□□□ -1.06
TRIM47Q96LD4 AP001269.3-201ENST00000588718 329 ntBASIC8.44□□□□□ -1.06
TRIM47Q96LD4 BNIP3P11-201ENST00000603878 563 ntBASIC8.44□□□□□ -1.06
TRIM47Q96LD4 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC8.44□□□□□ -1.06
TRIM47Q96LD4 AC091304.9-201ENST00000612091 226 ntBASIC8.44□□□□□ -1.06
TRIM47Q96LD4 GLYATL1-219ENST00000612196 909 ntAPPRIS ALT2 TSL 1 (best) BASIC8.44□□□□□ -1.06
TRIM47Q96LD4 MIR7109-201ENST00000613748 65 ntBASIC8.44□□□□□ -1.06
TRIM47Q96LD4 AC016542.3-201ENST00000623520 619 ntBASIC8.44□□□□□ -1.06
TRIM47Q96LD4 AC009033.1-201ENST00000624279 431 ntBASIC8.44□□□□□ -1.06
TRIM47Q96LD4 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC8.44□□□□□ -1.06
TRIM47Q96LD4 OR7E161P-202ENST00000641994 1033 ntBASIC8.44□□□□□ -1.06
TRIM47Q96LD4 GREM1-203ENST00000622074 14606 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
TRIM47Q96LD4 ARHGAP12-204ENST00000375250 4914 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
TRIM47Q96LD4 AC106882.1-201ENST00000515789 2371 ntTSL 2 BASIC8.44□□□□□ -1.06
TRIM47Q96LD4 DCX-206ENST00000496551 1320 ntAPPRIS P4 TSL 2 BASIC8.44□□□□□ -1.06
TRIM47Q96LD4 AL117339.5-201ENST00000640275 3955 ntAPPRIS P1 TSL 5 BASIC8.44□□□□□ -1.06
TRIM47Q96LD4 NRCAM-204ENST00000379028 6685 ntAPPRIS ALT2 TSL 5 BASIC8.44□□□□□ -1.06
TRIM47Q96LD4 ANK2-203ENST00000394537 6313 ntAPPRIS ALT2 TSL 1 (best) BASIC8.44□□□□□ -1.06
TRIM47Q96LD4 CDH12-201ENST00000382254 4164 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
TRIM47Q96LD4 ZNF10-202ENST00000402932 1967 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
TRIM47Q96LD4 NPIPB15-201ENST00000429990 1428 ntAPPRIS P1 TSL 5 BASIC8.44□□□□□ -1.06
TRIM47Q96LD4 HDAC1P1-201ENST00000455482 1445 ntBASIC8.44□□□□□ -1.06
TRIM47Q96LD4 SLC16A4-202ENST00000369781 2082 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
TRIM47Q96LD4 HP1BP3-201ENST00000312239 3938 ntAPPRIS P1 TSL 2 BASIC8.44□□□□□ -1.06
TRIM47Q96LD4 KIFAP3-203ENST00000367767 2718 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
TRIM47Q96LD4 CLHC1-204ENST00000407122 2139 ntAPPRIS P1 TSL 5 BASIC8.44□□□□□ -1.06
TRIM47Q96LD4 TMX2-202ENST00000378312 1521 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
TRIM47Q96LD4 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC8.44□□□□□ -1.06
TRIM47Q96LD4 MYO6-201ENST00000369975 5387 ntTSL 5 BASIC8.44□□□□□ -1.06
TRIM47Q96LD4 UEVLD-205ENST00000396197 4156 ntAPPRIS P1 TSL 5 BASIC8.43□□□□□ -1.06
TRIM47Q96LD4 TMEM267-202ENST00000500337 2950 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
TRIM47Q96LD4 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC8.43□□□□□ -1.06
TRIM47Q96LD4 KIAA0040-202ENST00000444639 4494 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
TRIM47Q96LD4 AC013562.1-201ENST00000519427 1722 ntTSL 2 BASIC8.43□□□□□ -1.06
TRIM47Q96LD4 ALKBH8-202ENST00000389568 2491 ntAPPRIS P3 TSL 5 BASIC8.43□□□□□ -1.06
TRIM47Q96LD4 AL353795.1-201ENST00000439134 1775 ntBASIC8.43□□□□□ -1.06
TRIM47Q96LD4 ACSL5-201ENST00000354273 3353 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
TRIM47Q96LD4 ALG13-224ENST00000610588 4175 ntTSL 2 BASIC8.43□□□□□ -1.06
TRIM47Q96LD4 FBXL13-201ENST00000313221 2744 ntTSL 2 BASIC8.43□□□□□ -1.06
TRIM47Q96LD4 AC109361.1-201ENST00000513220 3526 ntTSL 2 BASIC8.43□□□□□ -1.06
TRIM47Q96LD4 OLFML1-201ENST00000329293 2792 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
TRIM47Q96LD4 TRPM3-208ENST00000377105 5957 ntAPPRIS ALT2 TSL 5 BASIC8.43□□□□□ -1.06
TRIM47Q96LD4 SYNE1-213ENST00000448038 6001 ntTSL 5 BASIC8.43□□□□□ -1.06
TRIM47Q96LD4 OR8H1-203ENST00000641600 2927 ntAPPRIS P2 BASIC8.43□□□□□ -1.06
TRIM47Q96LD4 OR2T11-202ENST00000641193 3770 ntAPPRIS P1 BASIC8.43□□□□□ -1.06
TRIM47Q96LD4 OR4F15-201ENST00000332238 2119 ntAPPRIS P1 BASIC8.43□□□□□ -1.06
TRIM47Q96LD4 RNU4-21P-201ENST00000362802 126 ntBASIC8.43□□□□□ -1.06
TRIM47Q96LD4 Y_RNA.356-201ENST00000365475 113 ntBASIC8.43□□□□□ -1.06
TRIM47Q96LD4 RNU6-157P-201ENST00000383957 107 ntBASIC8.43□□□□□ -1.06
TRIM47Q96LD4 MIR498-201ENST00000385134 124 ntBASIC8.43□□□□□ -1.06
TRIM47Q96LD4 TRAV13-1-201ENST00000390436 360 ntAPPRIS P1 BASIC8.43□□□□□ -1.06
TRIM47Q96LD4 AC003045.1-201ENST00000398779 713 ntBASIC8.43□□□□□ -1.06
TRIM47Q96LD4 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
TRIM47Q96LD4 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC8.43□□□□□ -1.06
TRIM47Q96LD4 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC8.43□□□□□ -1.06
TRIM47Q96LD4 RAC1P4-201ENST00000419413 579 ntBASIC8.43□□□□□ -1.06
TRIM47Q96LD4 SDCBPP3-201ENST00000419629 891 ntBASIC8.43□□□□□ -1.06
TRIM47Q96LD4 AL109924.2-201ENST00000419800 934 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
TRIM47Q96LD4 NUP35P1-201ENST00000422734 947 ntBASIC8.43□□□□□ -1.06
TRIM47Q96LD4 GLRXP1-201ENST00000423261 334 ntBASIC8.43□□□□□ -1.06
TRIM47Q96LD4 KLF7-IT1-201ENST00000428777 655 ntTSL 2 BASIC8.43□□□□□ -1.06
TRIM47Q96LD4 AL031681.1-201ENST00000443304 400 ntBASIC8.43□□□□□ -1.06
TRIM47Q96LD4 FUNDC2P2-202ENST00000443452 493 ntBASIC8.43□□□□□ -1.06
TRIM47Q96LD4 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC8.43□□□□□ -1.06
TRIM47Q96LD4 GPX6-202ENST00000474923 716 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
TRIM47Q96LD4 AC108120.1-201ENST00000506543 991 ntBASIC8.43□□□□□ -1.06
TRIM47Q96LD4 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC8.43□□□□□ -1.06
TRIM47Q96LD4 PTP4A1P4-201ENST00000512479 322 ntBASIC8.43□□□□□ -1.06
TRIM47Q96LD4 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC8.43□□□□□ -1.06
TRIM47Q96LD4 AC106800.2-201ENST00000514009 1103 ntBASIC8.43□□□□□ -1.06
TRIM47Q96LD4 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC8.43□□□□□ -1.06
TRIM47Q96LD4 RNA5SP518-201ENST00000515957 119 ntBASIC8.43□□□□□ -1.06
TRIM47Q96LD4 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC8.43□□□□□ -1.06
TRIM47Q96LD4 AC084026.1-201ENST00000522028 564 ntTSL 4 BASIC8.43□□□□□ -1.06
TRIM47Q96LD4 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC8.43□□□□□ -1.06
TRIM47Q96LD4 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC8.43□□□□□ -1.06
TRIM47Q96LD4 AP001922.2-201ENST00000530435 390 ntTSL 3 BASIC8.43□□□□□ -1.06
TRIM47Q96LD4 NDUFA3P4-201ENST00000560814 250 ntBASIC8.43□□□□□ -1.06
TRIM47Q96LD4 CASC16-202ENST00000563844 610 ntTSL 3 BASIC8.43□□□□□ -1.06
TRIM47Q96LD4 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC8.43□□□□□ -1.06
TRIM47Q96LD4 AC011260.1-201ENST00000578420 472 ntBASIC8.43□□□□□ -1.06
TRIM47Q96LD4 RBM22P1-201ENST00000578589 1214 ntBASIC8.43□□□□□ -1.06
TRIM47Q96LD4 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC8.43□□□□□ -1.06
TRIM47Q96LD4 MIR4637-201ENST00000582405 84 ntBASIC8.43□□□□□ -1.06
TRIM47Q96LD4 MIR4271-201ENST00000582451 67 ntBASIC8.43□□□□□ -1.06
TRIM47Q96LD4 TTN-AS1-226ENST00000588716 604 ntTSL 5 BASIC8.43□□□□□ -1.06
TRIM47Q96LD4 AC005261.5-201ENST00000596280 355 ntBASIC8.43□□□□□ -1.06
TRIM47Q96LD4 ZNF137P-202ENST00000597158 308 ntTSL 3 BASIC8.43□□□□□ -1.06
TRIM47Q96LD4 OR7A11P-201ENST00000597719 953 ntBASIC8.43□□□□□ -1.06
TRIM47Q96LD4 AC036176.3-201ENST00000602456 418 ntBASIC8.43□□□□□ -1.06
TRIM47Q96LD4 SNORD91A-202ENST00000609620 191 ntBASIC8.43□□□□□ -1.06
TRIM47Q96LD4 AC068726.1-201ENST00000610993 341 ntBASIC8.43□□□□□ -1.06
TRIM47Q96LD4 CR381653.2-201ENST00000624041 768 ntBASIC8.43□□□□□ -1.06
Retrieved 100 of 98,524 protein–RNA pairs in 97.8 ms