Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 RN7SL193P-201ENST00000491708 276 ntBASIC5.71□□□□□ -1.5
PDLIM5Q96HC4 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
PDLIM5Q96HC4 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC5.71□□□□□ -1.5
PDLIM5Q96HC4 AC105384.2-201ENST00000508433 640 ntBASIC5.71□□□□□ -1.5
PDLIM5Q96HC4 AC147055.1-201ENST00000509261 750 ntBASIC5.71□□□□□ -1.5
PDLIM5Q96HC4 WBP1LP3-201ENST00000523033 208 ntBASIC5.71□□□□□ -1.5
PDLIM5Q96HC4 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC5.71□□□□□ -1.5
PDLIM5Q96HC4 TPPP2-208ENST00000530140 703 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
PDLIM5Q96HC4 AC006512.2-201ENST00000543250 486 ntBASIC5.71□□□□□ -1.5
PDLIM5Q96HC4 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC5.71□□□□□ -1.5
PDLIM5Q96HC4 HIRAP1-201ENST00000605318 787 ntBASIC5.71□□□□□ -1.5
PDLIM5Q96HC4 AC138473.1-201ENST00000605717 526 ntBASIC5.71□□□□□ -1.5
PDLIM5Q96HC4 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC5.71□□□□□ -1.5
PDLIM5Q96HC4 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC5.71□□□□□ -1.5
PDLIM5Q96HC4 AL683826.1-201ENST00000624104 627 ntBASIC5.71□□□□□ -1.5
PDLIM5Q96HC4 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
PDLIM5Q96HC4 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC5.71□□□□□ -1.5
PDLIM5Q96HC4 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC5.71□□□□□ -1.5
PDLIM5Q96HC4 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
PDLIM5Q96HC4 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC5.71□□□□□ -1.5
PDLIM5Q96HC4 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
PDLIM5Q96HC4 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
PDLIM5Q96HC4 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
PDLIM5Q96HC4 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
PDLIM5Q96HC4 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC5.7□□□□□ -1.5
PDLIM5Q96HC4 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
PDLIM5Q96HC4 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
PDLIM5Q96HC4 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
PDLIM5Q96HC4 AC107021.2-201ENST00000567714 2095 ntBASIC5.7□□□□□ -1.5
PDLIM5Q96HC4 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
PDLIM5Q96HC4 AP005432.1-201ENST00000580891 3485 ntBASIC5.7□□□□□ -1.5
PDLIM5Q96HC4 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC5.7□□□□□ -1.5
PDLIM5Q96HC4 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
PDLIM5Q96HC4 AL034546.1-201ENST00000623740 3693 ntBASIC5.7□□□□□ -1.5
PDLIM5Q96HC4 RNU1-136P-201ENST00000384181 164 ntBASIC5.7□□□□□ -1.5
PDLIM5Q96HC4 F9-202ENST00000394090 1272 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
PDLIM5Q96HC4 GAPDHP15-201ENST00000398586 975 ntBASIC5.7□□□□□ -1.5
PDLIM5Q96HC4 AL354868.1-201ENST00000417077 482 ntBASIC5.7□□□□□ -1.5
PDLIM5Q96HC4 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC5.7□□□□□ -1.5
PDLIM5Q96HC4 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC5.7□□□□□ -1.5
PDLIM5Q96HC4 AL031186.1-201ENST00000433125 385 ntTSL 3 BASIC5.7□□□□□ -1.5
PDLIM5Q96HC4 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
PDLIM5Q96HC4 YRDCP3-201ENST00000456507 480 ntBASIC5.7□□□□□ -1.5
PDLIM5Q96HC4 AC068228.1-201ENST00000461723 211 ntBASIC5.7□□□□□ -1.5
PDLIM5Q96HC4 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC5.7□□□□□ -1.5
PDLIM5Q96HC4 AC074255.1-201ENST00000511259 501 ntBASIC5.7□□□□□ -1.5
PDLIM5Q96HC4 RN7SKP238-201ENST00000516483 249 ntBASIC5.7□□□□□ -1.5
PDLIM5Q96HC4 RNA5SP340-201ENST00000517132 107 ntBASIC5.7□□□□□ -1.5
PDLIM5Q96HC4 AP000648.1-201ENST00000529682 397 ntBASIC5.7□□□□□ -1.5
PDLIM5Q96HC4 PCNAP4-201ENST00000532690 730 ntBASIC5.7□□□□□ -1.5
PDLIM5Q96HC4 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC5.7□□□□□ -1.5
PDLIM5Q96HC4 TMEM126B-211ENST00000534341 1273 ntTSL 2 BASIC5.7□□□□□ -1.5
PDLIM5Q96HC4 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
PDLIM5Q96HC4 AC006530.1-201ENST00000555980 571 ntBASIC5.7□□□□□ -1.5
PDLIM5Q96HC4 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC5.7□□□□□ -1.5
PDLIM5Q96HC4 AC002310.3-201ENST00000569728 723 ntBASIC5.7□□□□□ -1.5
PDLIM5Q96HC4 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
PDLIM5Q96HC4 MTND2P13-201ENST00000577438 1039 ntBASIC5.7□□□□□ -1.5
PDLIM5Q96HC4 AC005828.3-201ENST00000583552 591 ntTSL 5 BASIC5.7□□□□□ -1.5
PDLIM5Q96HC4 AC090227.1-201ENST00000590532 936 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
PDLIM5Q96HC4 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC5.7□□□□□ -1.5
PDLIM5Q96HC4 AL031601.1-201ENST00000605702 394 ntBASIC5.7□□□□□ -1.5
PDLIM5Q96HC4 AC073575.2-201ENST00000614212 627 ntBASIC5.7□□□□□ -1.5
PDLIM5Q96HC4 AC244100.4-201ENST00000617747 388 ntBASIC5.7□□□□□ -1.5
PDLIM5Q96HC4 OR11H2-202ENST00000641517 1085 ntBASIC5.7□□□□□ -1.5
PDLIM5Q96HC4 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
PDLIM5Q96HC4 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC5.7□□□□□ -1.5
PDLIM5Q96HC4 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
PDLIM5Q96HC4 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC5.7□□□□□ -1.5
PDLIM5Q96HC4 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC5.7□□□□□ -1.5
PDLIM5Q96HC4 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC5.7□□□□□ -1.5
PDLIM5Q96HC4 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC5.7□□□□□ -1.5
PDLIM5Q96HC4 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
PDLIM5Q96HC4 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
PDLIM5Q96HC4 AL359955.1-201ENST00000455242 3275 ntBASIC5.7□□□□□ -1.5
PDLIM5Q96HC4 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
PDLIM5Q96HC4 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
PDLIM5Q96HC4 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
PDLIM5Q96HC4 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
PDLIM5Q96HC4 EEF1A1P14-201ENST00000421195 1376 ntBASIC5.69□□□□□ -1.5
PDLIM5Q96HC4 OR14A16-202ENST00000641093 1367 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
PDLIM5Q96HC4 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC5.69□□□□□ -1.5
PDLIM5Q96HC4 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC5.69□□□□□ -1.5
PDLIM5Q96HC4 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
PDLIM5Q96HC4 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
PDLIM5Q96HC4 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC5.69□□□□□ -1.5
PDLIM5Q96HC4 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC5.69□□□□□ -1.5
PDLIM5Q96HC4 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
PDLIM5Q96HC4 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
PDLIM5Q96HC4 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC5.69□□□□□ -1.5
PDLIM5Q96HC4 RNU6-1263P-201ENST00000384601 106 ntBASIC5.69□□□□□ -1.5
PDLIM5Q96HC4 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
PDLIM5Q96HC4 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
PDLIM5Q96HC4 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC5.69□□□□□ -1.5
PDLIM5Q96HC4 AL354890.1-201ENST00000413730 346 ntBASIC5.69□□□□□ -1.5
PDLIM5Q96HC4 AL603840.1-203ENST00000424357 645 ntTSL 3 BASIC5.69□□□□□ -1.5
PDLIM5Q96HC4 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC5.69□□□□□ -1.5
PDLIM5Q96HC4 AC092162.2-201ENST00000438143 532 ntTSL 4 BASIC5.69□□□□□ -1.5
PDLIM5Q96HC4 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC5.69□□□□□ -1.5
PDLIM5Q96HC4 LINC01765-201ENST00000448680 491 ntTSL 2 BASIC5.69□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 142.3 ms