Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC5.85□□□□□ -1.47
SHROOM3Q8TF72 AC104695.2-201ENST00000605056 775 ntBASIC5.85□□□□□ -1.47
SHROOM3Q8TF72 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC5.85□□□□□ -1.47
SHROOM3Q8TF72 METTL8-217ENST00000612742 8132 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
SHROOM3Q8TF72 GTF2IP4-201ENST00000453092 2054 ntBASIC5.85□□□□□ -1.47
SHROOM3Q8TF72 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
SHROOM3Q8TF72 SPAG9-209ENST00000510283 4949 ntTSL 2 BASIC5.85□□□□□ -1.47
SHROOM3Q8TF72 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
SHROOM3Q8TF72 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
SHROOM3Q8TF72 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC5.84□□□□□ -1.47
SHROOM3Q8TF72 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC5.84□□□□□ -1.47
SHROOM3Q8TF72 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC5.84□□□□□ -1.47
SHROOM3Q8TF72 PRDM2-202ENST00000311066 7437 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
SHROOM3Q8TF72 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC5.84□□□□□ -1.47
SHROOM3Q8TF72 RN7SKP124-201ENST00000364730 341 ntBASIC5.84□□□□□ -1.47
SHROOM3Q8TF72 SNORD56.6-201ENST00000384569 71 ntBASIC5.84□□□□□ -1.47
SHROOM3Q8TF72 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
SHROOM3Q8TF72 HMGB1P20-201ENST00000402555 677 ntBASIC5.84□□□□□ -1.47
SHROOM3Q8TF72 LSM5-203ENST00000409782 649 ntTSL 5 BASIC5.84□□□□□ -1.47
SHROOM3Q8TF72 AC245060.4-201ENST00000413293 1121 ntBASIC5.84□□□□□ -1.47
SHROOM3Q8TF72 AC007161.1-204ENST00000423039 460 ntBASIC5.84□□□□□ -1.47
SHROOM3Q8TF72 OR10T1P-201ENST00000424327 947 ntBASIC5.84□□□□□ -1.47
SHROOM3Q8TF72 VDAC1P6-201ENST00000430062 855 ntBASIC5.84□□□□□ -1.47
SHROOM3Q8TF72 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC5.84□□□□□ -1.47
SHROOM3Q8TF72 AL390879.1-201ENST00000439143 386 ntBASIC5.84□□□□□ -1.47
SHROOM3Q8TF72 AC092106.1-201ENST00000444291 373 ntBASIC5.84□□□□□ -1.47
SHROOM3Q8TF72 AC073909.1-201ENST00000447112 999 ntBASIC5.84□□□□□ -1.47
SHROOM3Q8TF72 APPL2-203ENST00000546731 684 ntTSL 2 BASIC5.84□□□□□ -1.47
SHROOM3Q8TF72 AC126615.2-201ENST00000553003 515 ntBASIC5.84□□□□□ -1.47
SHROOM3Q8TF72 AL121612.2-201ENST00000612261 482 ntBASIC5.84□□□□□ -1.47
SHROOM3Q8TF72 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC5.84□□□□□ -1.47
SHROOM3Q8TF72 AC117409.1-201ENST00000470499 1310 ntBASIC5.84□□□□□ -1.47
SHROOM3Q8TF72 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
SHROOM3Q8TF72 RPS2P45-201ENST00000469997 2057 ntBASIC5.84□□□□□ -1.47
SHROOM3Q8TF72 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
SHROOM3Q8TF72 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
SHROOM3Q8TF72 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
SHROOM3Q8TF72 OR13C1P-202ENST00000641378 2919 ntBASIC5.84□□□□□ -1.48
SHROOM3Q8TF72 AP004607.3-201ENST00000530354 3915 ntBASIC5.84□□□□□ -1.48
SHROOM3Q8TF72 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
SHROOM3Q8TF72 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
SHROOM3Q8TF72 SNORA70-201ENST00000384436 135 ntBASIC5.84□□□□□ -1.48
SHROOM3Q8TF72 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC5.84□□□□□ -1.48
SHROOM3Q8TF72 MIR1286-201ENST00000408112 78 ntBASIC5.84□□□□□ -1.48
SHROOM3Q8TF72 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
SHROOM3Q8TF72 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC5.84□□□□□ -1.48
SHROOM3Q8TF72 UBA52P7-201ENST00000486088 380 ntBASIC5.84□□□□□ -1.48
SHROOM3Q8TF72 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC5.84□□□□□ -1.48
SHROOM3Q8TF72 SNORA70.20-201ENST00000516848 126 ntBASIC5.84□□□□□ -1.48
SHROOM3Q8TF72 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC5.84□□□□□ -1.48
SHROOM3Q8TF72 OR5AM1P-201ENST00000532136 1032 ntBASIC5.84□□□□□ -1.48
SHROOM3Q8TF72 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC5.84□□□□□ -1.48
SHROOM3Q8TF72 HSPE1P2-201ENST00000554777 306 ntBASIC5.84□□□□□ -1.48
SHROOM3Q8TF72 HNRNPCP1-201ENST00000556181 766 ntBASIC5.84□□□□□ -1.48
SHROOM3Q8TF72 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC5.84□□□□□ -1.48
SHROOM3Q8TF72 AP002884.5-201ENST00000595053 1132 ntBASIC5.84□□□□□ -1.48
SHROOM3Q8TF72 AL049840.6-201ENST00000604583 345 ntBASIC5.84□□□□□ -1.48
SHROOM3Q8TF72 AL390318.1-201ENST00000624564 687 ntBASIC5.84□□□□□ -1.48
SHROOM3Q8TF72 AC004808.2-201ENST00000627965 773 ntBASIC5.84□□□□□ -1.48
SHROOM3Q8TF72 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
SHROOM3Q8TF72 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
SHROOM3Q8TF72 FAM197Y2-202ENST00000448006 2338 ntTSL 2 BASIC5.83□□□□□ -1.48
SHROOM3Q8TF72 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
SHROOM3Q8TF72 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
SHROOM3Q8TF72 MUC5B-204ENST00000529681 17911 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
SHROOM3Q8TF72 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
SHROOM3Q8TF72 MAPK10-261ENST00000641050 3109 ntBASIC5.83□□□□□ -1.48
SHROOM3Q8TF72 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
SHROOM3Q8TF72 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
SHROOM3Q8TF72 SELENOWP1-201ENST00000322792 252 ntBASIC5.83□□□□□ -1.48
SHROOM3Q8TF72 SNORA56-201ENST00000383966 129 ntBASIC5.83□□□□□ -1.48
SHROOM3Q8TF72 OR7E101P-201ENST00000400428 513 ntBASIC5.83□□□□□ -1.48
SHROOM3Q8TF72 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC5.83□□□□□ -1.48
SHROOM3Q8TF72 AL139148.1-201ENST00000427122 680 ntBASIC5.83□□□□□ -1.48
SHROOM3Q8TF72 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC5.83□□□□□ -1.48
SHROOM3Q8TF72 AL645937.3-201ENST00000453647 936 ntBASIC5.83□□□□□ -1.48
SHROOM3Q8TF72 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC5.83□□□□□ -1.48
SHROOM3Q8TF72 AL122020.1-201ENST00000472287 459 ntBASIC5.83□□□□□ -1.48
SHROOM3Q8TF72 COPS8P2-201ENST00000473228 627 ntBASIC5.83□□□□□ -1.48
SHROOM3Q8TF72 DUTP1-201ENST00000493631 470 ntBASIC5.83□□□□□ -1.48
SHROOM3Q8TF72 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC5.83□□□□□ -1.48
SHROOM3Q8TF72 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC5.83□□□□□ -1.48
SHROOM3Q8TF72 WBP1LP3-201ENST00000523033 208 ntBASIC5.83□□□□□ -1.48
SHROOM3Q8TF72 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC5.83□□□□□ -1.48
SHROOM3Q8TF72 AC044860.2-201ENST00000561005 179 ntBASIC5.83□□□□□ -1.48
SHROOM3Q8TF72 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC5.83□□□□□ -1.48
SHROOM3Q8TF72 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC5.83□□□□□ -1.48
SHROOM3Q8TF72 IGLCOR22-2-201ENST00000605398 313 ntBASIC5.83□□□□□ -1.48
SHROOM3Q8TF72 AC021422.1-201ENST00000621212 473 ntBASIC5.83□□□□□ -1.48
SHROOM3Q8TF72 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC5.83□□□□□ -1.48
SHROOM3Q8TF72 MAPK10-270ENST00000641102 3538 ntBASIC5.83□□□□□ -1.48
SHROOM3Q8TF72 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC5.83□□□□□ -1.48
SHROOM3Q8TF72 ZFP42-201ENST00000326866 2651 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
SHROOM3Q8TF72 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
SHROOM3Q8TF72 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC5.82□□□□□ -1.48
SHROOM3Q8TF72 SNX18P3-202ENST00000565670 1750 ntBASIC5.82□□□□□ -1.48
SHROOM3Q8TF72 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
SHROOM3Q8TF72 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC5.82□□□□□ -1.48
SHROOM3Q8TF72 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC5.82□□□□□ -1.48
SHROOM3Q8TF72 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC5.82□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms