Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 NSUN6-201ENST00000377304 2201 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
SYNPOQ8N3V7 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
SYNPOQ8N3V7 ARHGAP32-203ENST00000524655 8194 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
SYNPOQ8N3V7 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
SYNPOQ8N3V7 NBPF26-204ENST00000615145 2656 ntTSL 5 BASIC6.73□□□□□ -1.33
SYNPOQ8N3V7 CA10-204ENST00000570565 2276 ntTSL 5 BASIC6.73□□□□□ -1.33
SYNPOQ8N3V7 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC6.73□□□□□ -1.33
SYNPOQ8N3V7 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
SYNPOQ8N3V7 AC011592.1-201ENST00000624647 3634 ntBASIC6.72□□□□□ -1.33
SYNPOQ8N3V7 SP110-201ENST00000258381 2426 ntAPPRIS P4 TSL 2 BASIC6.72□□□□□ -1.33
SYNPOQ8N3V7 MOB4-201ENST00000233892 3785 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
SYNPOQ8N3V7 PDE4B-207ENST00000480109 2037 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
SYNPOQ8N3V7 LGALS17A-201ENST00000412609 2562 ntTSL 2 BASIC6.72□□□□□ -1.33
SYNPOQ8N3V7 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC6.72□□□□□ -1.33
SYNPOQ8N3V7 EXPH5-203ENST00000525344 6542 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
SYNPOQ8N3V7 BDNF-212ENST00000525528 4766 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
SYNPOQ8N3V7 ATXN3-204ENST00000429774 6713 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
SYNPOQ8N3V7 AHI1-204ENST00000367800 5921 ntAPPRIS P2 TSL 1 (best) BASIC6.72□□□□□ -1.33
SYNPOQ8N3V7 BNC2-203ENST00000380672 12844 ntAPPRIS P2 TSL 2 BASIC6.72□□□□□ -1.33
SYNPOQ8N3V7 AC068490.1-202ENST00000637384 3185 ntTSL 5 BASIC6.72□□□□□ -1.33
SYNPOQ8N3V7 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
SYNPOQ8N3V7 TCF12-213ENST00000559703 1544 ntTSL 5 BASIC6.72□□□□□ -1.33
SYNPOQ8N3V7 MCCC1-210ENST00000492597 2774 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
SYNPOQ8N3V7 SGO1-AS1-205ENST00000634837 1677 ntTSL 5 BASIC6.72□□□□□ -1.33
SYNPOQ8N3V7 VIRMA-202ENST00000421249 3924 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
SYNPOQ8N3V7 LRMDA-208ENST00000496424 3923 ntTSL 2 BASIC6.72□□□□□ -1.33
SYNPOQ8N3V7 USPL1-203ENST00000614860 4074 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
SYNPOQ8N3V7 ZNF519-207ENST00000590202 2830 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
SYNPOQ8N3V7 RERGL-201ENST00000229002 1147 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
SYNPOQ8N3V7 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
SYNPOQ8N3V7 NDUFA4-201ENST00000339600 2130 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
SYNPOQ8N3V7 ANKRD36P1-201ENST00000344424 659 ntBASIC6.72□□□□□ -1.33
SYNPOQ8N3V7 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC6.72□□□□□ -1.33
SYNPOQ8N3V7 RNA5SP498-201ENST00000411342 120 ntBASIC6.72□□□□□ -1.33
SYNPOQ8N3V7 LINC02257-201ENST00000412445 605 ntTSL 2 BASIC6.72□□□□□ -1.33
SYNPOQ8N3V7 AL034345.2-202ENST00000416948 830 ntTSL 2 BASIC6.72□□□□□ -1.33
SYNPOQ8N3V7 AL035401.1-201ENST00000420572 871 ntTSL 3 BASIC6.72□□□□□ -1.33
SYNPOQ8N3V7 RPL7AP14-201ENST00000424041 802 ntBASIC6.72□□□□□ -1.33
SYNPOQ8N3V7 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC6.72□□□□□ -1.33
SYNPOQ8N3V7 MTCO2P20-201ENST00000437339 673 ntBASIC6.72□□□□□ -1.33
SYNPOQ8N3V7 AC110602.1-201ENST00000437414 318 ntBASIC6.72□□□□□ -1.33
SYNPOQ8N3V7 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC6.72□□□□□ -1.33
SYNPOQ8N3V7 AL451063.1-201ENST00000450164 1133 ntBASIC6.72□□□□□ -1.33
SYNPOQ8N3V7 AC244505.3-201ENST00000454598 187 ntBASIC6.72□□□□□ -1.33
SYNPOQ8N3V7 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC6.72□□□□□ -1.33
SYNPOQ8N3V7 LINC02025-201ENST00000488348 360 ntTSL 3 BASIC6.72□□□□□ -1.33
SYNPOQ8N3V7 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC6.72□□□□□ -1.33
SYNPOQ8N3V7 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC6.72□□□□□ -1.33
SYNPOQ8N3V7 USP17L23-201ENST00000506619 551 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
SYNPOQ8N3V7 AC021106.1-201ENST00000509020 1058 ntBASIC6.72□□□□□ -1.33
SYNPOQ8N3V7 AC022973.3-201ENST00000521014 467 ntTSL 5 BASIC6.72□□□□□ -1.33
SYNPOQ8N3V7 AP003548.1-201ENST00000523862 711 ntTSL 3 BASIC6.72□□□□□ -1.33
SYNPOQ8N3V7 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC6.72□□□□□ -1.33
SYNPOQ8N3V7 AP001636.2-201ENST00000525517 696 ntBASIC6.72□□□□□ -1.33
SYNPOQ8N3V7 NPIPB14P-203ENST00000532298 987 ntBASIC6.72□□□□□ -1.33
SYNPOQ8N3V7 AL049836.2-201ENST00000553318 513 ntTSL 5 BASIC6.72□□□□□ -1.33
SYNPOQ8N3V7 AC009097.3-201ENST00000563557 1018 ntBASIC6.72□□□□□ -1.33
SYNPOQ8N3V7 ATP5F1P7-201ENST00000567330 760 ntBASIC6.72□□□□□ -1.33
SYNPOQ8N3V7 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC6.72□□□□□ -1.33
SYNPOQ8N3V7 AC087575.1-201ENST00000585087 229 ntBASIC6.72□□□□□ -1.33
SYNPOQ8N3V7 AL138895.2-201ENST00000603019 178 ntBASIC6.72□□□□□ -1.33
SYNPOQ8N3V7 AC090525.3-201ENST00000605601 189 ntBASIC6.72□□□□□ -1.33
SYNPOQ8N3V7 SNORA74.4-201ENST00000607595 199 ntBASIC6.72□□□□□ -1.33
SYNPOQ8N3V7 AC011472.4-201ENST00000615848 491 ntBASIC6.72□□□□□ -1.33
SYNPOQ8N3V7 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC6.72□□□□□ -1.33
SYNPOQ8N3V7 AC123767.1-202ENST00000620407 817 ntBASIC6.72□□□□□ -1.33
SYNPOQ8N3V7 AL450226.2-201ENST00000622913 439 ntBASIC6.72□□□□□ -1.33
SYNPOQ8N3V7 AC004836.1-201ENST00000623032 634 ntBASIC6.72□□□□□ -1.33
SYNPOQ8N3V7 AC021079.1-201ENST00000625268 907 ntTSL 3 BASIC6.72□□□□□ -1.33
SYNPOQ8N3V7 AC099329.1-203ENST00000629885 767 ntTSL 5 BASIC6.72□□□□□ -1.33
SYNPOQ8N3V7 FRG1EP-201ENST00000634469 770 ntBASIC6.72□□□□□ -1.33
SYNPOQ8N3V7 AC024475.3-203ENST00000634971 854 ntTSL 5 BASIC6.72□□□□□ -1.33
SYNPOQ8N3V7 LINC00598-209ENST00000635966 1148 ntTSL 5 BASIC6.72□□□□□ -1.33
SYNPOQ8N3V7 ADNP-202ENST00000371602 6115 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
SYNPOQ8N3V7 AC104837.1-201ENST00000444644 1587 ntBASIC6.72□□□□□ -1.33
SYNPOQ8N3V7 MDGA2-203ENST00000426342 2871 ntAPPRIS P2 TSL 5 BASIC6.72□□□□□ -1.33
SYNPOQ8N3V7 CYP3A5-202ENST00000339843 3320 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
SYNPOQ8N3V7 AAK1-203ENST00000409085 11345 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
SYNPOQ8N3V7 EIF1-203ENST00000469257 2330 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
SYNPOQ8N3V7 TMEFF2-203ENST00000409056 3364 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
SYNPOQ8N3V7 DNAJC6-203ENST00000395325 5743 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
SYNPOQ8N3V7 DCDC2-201ENST00000378450 3684 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
SYNPOQ8N3V7 EEF1A1P21-201ENST00000512363 1344 ntBASIC6.72□□□□□ -1.33
SYNPOQ8N3V7 BEST1-202ENST00000449131 4267 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
SYNPOQ8N3V7 DPYD-202ENST00000370192 4412 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
SYNPOQ8N3V7 ITGA1-201ENST00000282588 10757 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
SYNPOQ8N3V7 OSBPL6-207ENST00000409631 3273 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
SYNPOQ8N3V7 ADI1-202ENST00000382093 3870 ntTSL 2 BASIC6.72□□□□□ -1.33
SYNPOQ8N3V7 EPS15-203ENST00000371733 5225 ntAPPRIS P2 TSL 1 (best) BASIC6.72□□□□□ -1.33
SYNPOQ8N3V7 PCDH11Y-204ENST00000400457 9039 ntAPPRIS P5 TSL 1 (best) BASIC6.71□□□□□ -1.33
SYNPOQ8N3V7 ZSCAN12-202ENST00000396827 3909 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
SYNPOQ8N3V7 SLC39A12-202ENST00000377371 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC6.71□□□□□ -1.33
SYNPOQ8N3V7 CYP2C8-212ENST00000623108 1962 ntTSL 2 BASIC6.71□□□□□ -1.33
SYNPOQ8N3V7 KIF1B-204ENST00000377086 10669 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
SYNPOQ8N3V7 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
SYNPOQ8N3V7 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC6.71□□□□□ -1.33
SYNPOQ8N3V7 PARP4P1-201ENST00000435945 2337 ntBASIC6.71□□□□□ -1.33
SYNPOQ8N3V7 AC099062.1-202ENST00000640362 3864 ntTSL 5 BASIC6.71□□□□□ -1.33
SYNPOQ8N3V7 AC105749.1-201ENST00000631338 2008 ntBASIC6.71□□□□□ -1.33
SYNPOQ8N3V7 KALRN-204ENST00000360013 10806 ntAPPRIS P5 TSL 5 BASIC6.71□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 232.2 ms