Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 AL158827.1-201ENST00000416300 391 ntBASIC5.45□□□□□ -1.54
HMGCS1Q01581 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC5.45□□□□□ -1.54
HMGCS1Q01581 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC5.45□□□□□ -1.54
HMGCS1Q01581 AC066692.1-201ENST00000421721 457 ntBASIC5.45□□□□□ -1.54
HMGCS1Q01581 OR5W1P-201ENST00000423705 938 ntBASIC5.45□□□□□ -1.54
HMGCS1Q01581 TMEM183AP1-205ENST00000432739 290 ntBASIC5.45□□□□□ -1.54
HMGCS1Q01581 MTND2P40-201ENST00000436718 841 ntBASIC5.45□□□□□ -1.54
HMGCS1Q01581 AC108066.1-201ENST00000437261 596 ntTSL 4 BASIC5.45□□□□□ -1.54
HMGCS1Q01581 LINC01035-201ENST00000445072 784 ntTSL 3 BASIC5.45□□□□□ -1.54
HMGCS1Q01581 MIR4435-2HG-214ENST00000453478 560 ntTSL 4 BASIC5.45□□□□□ -1.54
HMGCS1Q01581 RPSAP37-201ENST00000470913 821 ntBASIC5.45□□□□□ -1.54
HMGCS1Q01581 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC5.45□□□□□ -1.54
HMGCS1Q01581 AC009120.1-201ENST00000493458 473 ntBASIC5.45□□□□□ -1.54
HMGCS1Q01581 RPS17P5-201ENST00000498293 408 ntBASIC5.45□□□□□ -1.54
HMGCS1Q01581 AC114781.3-201ENST00000512083 142 ntBASIC5.45□□□□□ -1.54
HMGCS1Q01581 SCARNA6.1-201ENST00000516989 238 ntBASIC5.45□□□□□ -1.54
HMGCS1Q01581 AC021678.3-201ENST00000517893 476 ntBASIC5.45□□□□□ -1.54
HMGCS1Q01581 AC060775.1-201ENST00000518241 520 ntBASIC5.45□□□□□ -1.54
HMGCS1Q01581 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC5.45□□□□□ -1.54
HMGCS1Q01581 GTF2IP11-201ENST00000526931 420 ntBASIC5.45□□□□□ -1.54
HMGCS1Q01581 AC068305.2-201ENST00000550567 1205 ntBASIC5.45□□□□□ -1.54
HMGCS1Q01581 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC5.45□□□□□ -1.54
HMGCS1Q01581 AC018767.2-201ENST00000562361 600 ntTSL 5 BASIC5.45□□□□□ -1.54
HMGCS1Q01581 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC5.45□□□□□ -1.54
HMGCS1Q01581 OOSP1P2-201ENST00000579644 351 ntBASIC5.45□□□□□ -1.54
HMGCS1Q01581 AC005726.4-201ENST00000582858 458 ntBASIC5.45□□□□□ -1.54
HMGCS1Q01581 AL583832.1-201ENST00000603227 784 ntBASIC5.45□□□□□ -1.54
HMGCS1Q01581 RPL12P48-201ENST00000605620 304 ntBASIC5.45□□□□□ -1.54
HMGCS1Q01581 AC108865.2-201ENST00000606881 432 ntBASIC5.45□□□□□ -1.54
HMGCS1Q01581 MIR6778-201ENST00000617912 73 ntBASIC5.45□□□□□ -1.54
HMGCS1Q01581 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
HMGCS1Q01581 AL121839.2-201ENST00000565058 6943 ntBASIC5.45□□□□□ -1.54
HMGCS1Q01581 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
HMGCS1Q01581 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC5.45□□□□□ -1.54
HMGCS1Q01581 PWAR1-201ENST00000624188 2414 ntBASIC5.45□□□□□ -1.54
HMGCS1Q01581 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC5.45□□□□□ -1.54
HMGCS1Q01581 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
HMGCS1Q01581 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC5.45□□□□□ -1.54
HMGCS1Q01581 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
HMGCS1Q01581 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
HMGCS1Q01581 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC5.44□□□□□ -1.54
HMGCS1Q01581 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC5.44□□□□□ -1.54
HMGCS1Q01581 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC5.44□□□□□ -1.54
HMGCS1Q01581 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.44□□□□□ -1.54
HMGCS1Q01581 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
HMGCS1Q01581 SAMM50P1-201ENST00000455403 1399 ntBASIC5.44□□□□□ -1.54
HMGCS1Q01581 AC099654.3-201ENST00000447087 1546 ntBASIC5.44□□□□□ -1.54
HMGCS1Q01581 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
HMGCS1Q01581 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC5.44□□□□□ -1.54
HMGCS1Q01581 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC5.44□□□□□ -1.54
HMGCS1Q01581 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
HMGCS1Q01581 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
HMGCS1Q01581 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
HMGCS1Q01581 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
HMGCS1Q01581 CLEC4A-204ENST00000360500 597 ntTSL 5 BASIC5.44□□□□□ -1.54
HMGCS1Q01581 RNU1-150P-201ENST00000362491 162 ntBASIC5.44□□□□□ -1.54
HMGCS1Q01581 PKIB-203ENST00000368446 556 ntTSL 2 BASIC5.44□□□□□ -1.54
HMGCS1Q01581 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
HMGCS1Q01581 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
HMGCS1Q01581 RPS6P23-201ENST00000413224 722 ntBASIC5.44□□□□□ -1.54
HMGCS1Q01581 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC5.44□□□□□ -1.54
HMGCS1Q01581 PMCHL1-203ENST00000423301 697 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
HMGCS1Q01581 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
HMGCS1Q01581 MAJIN-202ENST00000432175 838 ntAPPRIS P3 TSL 1 (best) BASIC5.44□□□□□ -1.54
HMGCS1Q01581 PCNPP2-201ENST00000441651 455 ntBASIC5.44□□□□□ -1.54
HMGCS1Q01581 LINC01456-201ENST00000453902 708 ntTSL 3 BASIC5.44□□□□□ -1.54
HMGCS1Q01581 BBIP1-208ENST00000454061 812 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
HMGCS1Q01581 NDUFA5P5-201ENST00000468361 342 ntBASIC5.44□□□□□ -1.54
HMGCS1Q01581 RN7SL570P-201ENST00000484405 292 ntBASIC5.44□□□□□ -1.54
HMGCS1Q01581 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
HMGCS1Q01581 B4GALNT2P1-201ENST00000508857 307 ntBASIC5.44□□□□□ -1.54
HMGCS1Q01581 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC5.44□□□□□ -1.54
HMGCS1Q01581 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC5.44□□□□□ -1.54
HMGCS1Q01581 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC5.44□□□□□ -1.54
HMGCS1Q01581 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
HMGCS1Q01581 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC5.44□□□□□ -1.54
HMGCS1Q01581 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC5.44□□□□□ -1.54
HMGCS1Q01581 HSPE1P2-201ENST00000554777 306 ntBASIC5.44□□□□□ -1.54
HMGCS1Q01581 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC5.44□□□□□ -1.54
HMGCS1Q01581 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC5.44□□□□□ -1.54
HMGCS1Q01581 NDUFA5P11-201ENST00000567995 343 ntBASIC5.44□□□□□ -1.54
HMGCS1Q01581 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC5.44□□□□□ -1.54
HMGCS1Q01581 AC018809.2-201ENST00000602436 3823 ntBASIC5.44□□□□□ -1.54
HMGCS1Q01581 PACRG-210ENST00000611387 279 ntTSL 5 BASIC5.44□□□□□ -1.54
HMGCS1Q01581 AC090607.5-201ENST00000615692 224 ntBASIC5.44□□□□□ -1.54
HMGCS1Q01581 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC5.44□□□□□ -1.54
HMGCS1Q01581 FO681491.1-202ENST00000623392 737 ntBASIC5.44□□□□□ -1.54
HMGCS1Q01581 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC5.44□□□□□ -1.54
HMGCS1Q01581 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.44□□□□□ -1.54
HMGCS1Q01581 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
HMGCS1Q01581 GTF2IP4-201ENST00000453092 2054 ntBASIC5.44□□□□□ -1.54
HMGCS1Q01581 VNN3-203ENST00000392393 1603 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
HMGCS1Q01581 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
HMGCS1Q01581 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
HMGCS1Q01581 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.44□□□□□ -1.54
HMGCS1Q01581 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.44□□□□□ -1.54
HMGCS1Q01581 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
HMGCS1Q01581 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC5.43□□□□□ -1.54
HMGCS1Q01581 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
HMGCS1Q01581 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.43□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 92.1 ms