Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
HIST1H3AP68431 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
HIST1H3AP68431 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC5□□□□□ -1.61
HIST1H3AP68431 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
HIST1H3AP68431 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC5□□□□□ -1.61
HIST1H3AP68431 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
HIST1H3AP68431 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
HIST1H3AP68431 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC5□□□□□ -1.61
HIST1H3AP68431 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC5□□□□□ -1.61
HIST1H3AP68431 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC5□□□□□ -1.61
HIST1H3AP68431 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
HIST1H3AP68431 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
HIST1H3AP68431 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC5□□□□□ -1.61
HIST1H3AP68431 CLEC4A-204ENST00000360500 597 ntTSL 5 BASIC5□□□□□ -1.61
HIST1H3AP68431 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC5□□□□□ -1.61
HIST1H3AP68431 AK4P4-201ENST00000419465 646 ntBASIC5□□□□□ -1.61
HIST1H3AP68431 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC5□□□□□ -1.61
HIST1H3AP68431 OR10T1P-201ENST00000424327 947 ntBASIC5□□□□□ -1.61
HIST1H3AP68431 AC003991.1-210ENST00000434733 1048 ntTSL 3 BASIC5□□□□□ -1.61
HIST1H3AP68431 PCBP2P1-201ENST00000437262 977 ntBASIC5□□□□□ -1.61
HIST1H3AP68431 AC110602.1-201ENST00000437414 318 ntBASIC5□□□□□ -1.61
HIST1H3AP68431 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC5□□□□□ -1.61
HIST1H3AP68431 AC073072.2-201ENST00000447425 348 ntBASIC5□□□□□ -1.61
HIST1H3AP68431 RN7SL168P-201ENST00000463821 279 ntBASIC5□□□□□ -1.61
HIST1H3AP68431 AP002884.1-201ENST00000479691 655 ntBASIC5□□□□□ -1.61
HIST1H3AP68431 RN7SL170P-201ENST00000487098 295 ntBASIC5□□□□□ -1.61
HIST1H3AP68431 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC5□□□□□ -1.61
HIST1H3AP68431 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC5□□□□□ -1.61
HIST1H3AP68431 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC5□□□□□ -1.61
HIST1H3AP68431 TRIM77BP-201ENST00000524985 1119 ntBASIC5□□□□□ -1.61
HIST1H3AP68431 OR8Q1P-201ENST00000526467 655 ntBASIC5□□□□□ -1.61
HIST1H3AP68431 AC084855.1-201ENST00000528696 572 ntTSL 2 BASIC5□□□□□ -1.61
HIST1H3AP68431 AC021483.1-201ENST00000560760 539 ntTSL 3 BASIC5□□□□□ -1.61
HIST1H3AP68431 AGGF1P7-201ENST00000562369 913 ntBASIC5□□□□□ -1.61
HIST1H3AP68431 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC5□□□□□ -1.61
HIST1H3AP68431 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC5□□□□□ -1.61
HIST1H3AP68431 MIR4271-201ENST00000582451 67 ntBASIC5□□□□□ -1.61
HIST1H3AP68431 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC5□□□□□ -1.61
HIST1H3AP68431 AC005618.4-201ENST00000625053 554 ntBASIC5□□□□□ -1.61
HIST1H3AP68431 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC5□□□□□ -1.61
HIST1H3AP68431 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
HIST1H3AP68431 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC5□□□□□ -1.61
HIST1H3AP68431 ALB-220ENST00000621628 1606 ntTSL 5 BASIC5□□□□□ -1.61
HIST1H3AP68431 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC5□□□□□ -1.61
HIST1H3AP68431 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
HIST1H3AP68431 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC5□□□□□ -1.61
HIST1H3AP68431 AC004076.2-201ENST00000620532 3323 ntBASIC5□□□□□ -1.61
HIST1H3AP68431 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC4.99□□□□□ -1.61
HIST1H3AP68431 AC109446.4-201ENST00000623235 2755 ntBASIC4.99□□□□□ -1.61
HIST1H3AP68431 AC006206.1-201ENST00000544842 3387 ntBASIC4.99□□□□□ -1.61
HIST1H3AP68431 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
HIST1H3AP68431 AL031595.2-201ENST00000624215 19071 ntBASIC4.99□□□□□ -1.61
HIST1H3AP68431 MTND5P12-201ENST00000502851 1449 ntBASIC4.99□□□□□ -1.61
HIST1H3AP68431 AC114774.1-201ENST00000507410 1770 ntBASIC4.99□□□□□ -1.61
HIST1H3AP68431 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
HIST1H3AP68431 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
HIST1H3AP68431 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
HIST1H3AP68431 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
HIST1H3AP68431 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
HIST1H3AP68431 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
HIST1H3AP68431 NENFP1-201ENST00000419476 466 ntBASIC4.99□□□□□ -1.61
HIST1H3AP68431 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC4.99□□□□□ -1.61
HIST1H3AP68431 AL356476.1-201ENST00000421481 480 ntTSL 5 BASIC4.99□□□□□ -1.61
HIST1H3AP68431 BX323845.3-201ENST00000428215 527 ntBASIC4.99□□□□□ -1.61
HIST1H3AP68431 BX276092.6-201ENST00000430476 250 ntBASIC4.99□□□□□ -1.61
HIST1H3AP68431 AC211433.1-202ENST00000434256 1187 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
HIST1H3AP68431 AC108066.1-201ENST00000437261 596 ntTSL 4 BASIC4.99□□□□□ -1.61
HIST1H3AP68431 AL512637.1-201ENST00000439523 1231 ntBASIC4.99□□□□□ -1.61
HIST1H3AP68431 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC4.99□□□□□ -1.61
HIST1H3AP68431 BX276092.8-201ENST00000455722 250 ntBASIC4.99□□□□□ -1.61
HIST1H3AP68431 RPSAP37-201ENST00000470913 821 ntBASIC4.99□□□□□ -1.61
HIST1H3AP68431 DEFB109A-201ENST00000482450 265 ntBASIC4.99□□□□□ -1.61
HIST1H3AP68431 RPL37P23-201ENST00000492641 294 ntBASIC4.99□□□□□ -1.61
HIST1H3AP68431 RPS17P5-201ENST00000498293 408 ntBASIC4.99□□□□□ -1.61
HIST1H3AP68431 AC060775.1-201ENST00000518241 520 ntBASIC4.99□□□□□ -1.61
HIST1H3AP68431 AC109466.1-215ENST00000519750 516 ntTSL 5 BASIC4.99□□□□□ -1.61
HIST1H3AP68431 MAL2-207ENST00000522828 603 ntTSL 3 BASIC4.99□□□□□ -1.61
HIST1H3AP68431 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC4.99□□□□□ -1.61
HIST1H3AP68431 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC4.99□□□□□ -1.61
HIST1H3AP68431 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC4.99□□□□□ -1.61
HIST1H3AP68431 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC4.99□□□□□ -1.61
HIST1H3AP68431 AC063977.5-201ENST00000601044 974 ntBASIC4.99□□□□□ -1.61
HIST1H3AP68431 AL022394.1-201ENST00000606979 292 ntBASIC4.99□□□□□ -1.61
HIST1H3AP68431 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
HIST1H3AP68431 Six3os1_2.1-201ENST00000616963 217 ntBASIC4.99□□□□□ -1.61
HIST1H3AP68431 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
HIST1H3AP68431 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
HIST1H3AP68431 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC4.99□□□□□ -1.61
HIST1H3AP68431 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC4.99□□□□□ -1.61
HIST1H3AP68431 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
HIST1H3AP68431 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
HIST1H3AP68431 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC4.99□□□□□ -1.61
HIST1H3AP68431 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC4.99□□□□□ -1.61
HIST1H3AP68431 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
HIST1H3AP68431 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
HIST1H3AP68431 HSPD1P7-201ENST00000447985 1686 ntBASIC4.99□□□□□ -1.61
HIST1H3AP68431 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
HIST1H3AP68431 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
HIST1H3AP68431 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC4.98□□□□□ -1.61
HIST1H3AP68431 AC099654.3-201ENST00000447087 1546 ntBASIC4.98□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 126.5 ms