Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC6.3□□□□□ -1.4
TPM4P67936 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC6.3□□□□□ -1.4
TPM4P67936 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC6.3□□□□□ -1.4
TPM4P67936 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC6.3□□□□□ -1.4
TPM4P67936 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC6.3□□□□□ -1.4
TPM4P67936 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC6.3□□□□□ -1.4
TPM4P67936 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC6.3□□□□□ -1.4
TPM4P67936 AC008627.1-201ENST00000517511 1704 ntBASIC6.3□□□□□ -1.4
TPM4P67936 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
TPM4P67936 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
TPM4P67936 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
TPM4P67936 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC6.3□□□□□ -1.4
TPM4P67936 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC6.29□□□□□ -1.4
TPM4P67936 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC6.29□□□□□ -1.4
TPM4P67936 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC6.29□□□□□ -1.4
TPM4P67936 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC6.29□□□□□ -1.4
TPM4P67936 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
TPM4P67936 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
TPM4P67936 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
TPM4P67936 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
TPM4P67936 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
TPM4P67936 AL133260.1-201ENST00000405720 405 ntBASIC6.29□□□□□ -1.4
TPM4P67936 RPS14P4-201ENST00000415880 418 ntBASIC6.29□□□□□ -1.4
TPM4P67936 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC6.29□□□□□ -1.4
TPM4P67936 LINC01114-201ENST00000421071 482 ntTSL 3 BASIC6.29□□□□□ -1.4
TPM4P67936 RPL32-206ENST00000435983 620 ntAPPRIS P1 TSL 2 BASIC6.29□□□□□ -1.4
TPM4P67936 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC6.29□□□□□ -1.4
TPM4P67936 RN7SL254P-201ENST00000460609 284 ntBASIC6.29□□□□□ -1.4
TPM4P67936 RPS27P20-201ENST00000492051 246 ntBASIC6.29□□□□□ -1.4
TPM4P67936 LINC01322-202ENST00000494915 594 ntTSL 4 BASIC6.29□□□□□ -1.4
TPM4P67936 AC023424.1-201ENST00000496058 459 ntBASIC6.29□□□□□ -1.4
TPM4P67936 AC009879.1-201ENST00000520029 839 ntBASIC6.29□□□□□ -1.4
TPM4P67936 CASC19-203ENST00000523510 575 ntTSL 3 BASIC6.29□□□□□ -1.4
TPM4P67936 AC079064.1-201ENST00000528365 362 ntBASIC6.29□□□□□ -1.4
TPM4P67936 MIR6885-201ENST00000612241 66 ntBASIC6.29□□□□□ -1.4
TPM4P67936 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC6.29□□□□□ -1.4
TPM4P67936 QRSL1P1-201ENST00000400977 1540 ntBASIC6.29□□□□□ -1.4
TPM4P67936 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
TPM4P67936 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
TPM4P67936 AC005261.2-201ENST00000593427 4258 ntBASIC6.29□□□□□ -1.4
TPM4P67936 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC6.28□□□□□ -1.4
TPM4P67936 ANTXR2-204ENST00000404191 1469 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
TPM4P67936 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC6.28□□□□□ -1.4
TPM4P67936 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
TPM4P67936 OR5B12-201ENST00000302572 1054 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
TPM4P67936 OR2L2-201ENST00000366479 1134 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
TPM4P67936 NIFKP3-201ENST00000417799 865 ntBASIC6.28□□□□□ -1.4
TPM4P67936 TRGV5P-201ENST00000419915 354 ntBASIC6.28□□□□□ -1.4
TPM4P67936 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC6.28□□□□□ -1.4
TPM4P67936 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC6.28□□□□□ -1.4
TPM4P67936 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
TPM4P67936 AP002856.1-201ENST00000447864 562 ntTSL 4 BASIC6.28□□□□□ -1.4
TPM4P67936 AC005077.1-201ENST00000449226 375 ntBASIC6.28□□□□□ -1.4
TPM4P67936 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC6.28□□□□□ -1.4
TPM4P67936 LINC01456-201ENST00000453902 708 ntTSL 3 BASIC6.28□□□□□ -1.4
TPM4P67936 GEMIN2P1-201ENST00000454246 752 ntBASIC6.28□□□□□ -1.4
TPM4P67936 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC6.28□□□□□ -1.4
TPM4P67936 RN7SL570P-201ENST00000484405 292 ntBASIC6.28□□□□□ -1.4
TPM4P67936 COX6B1P2-201ENST00000489624 230 ntBASIC6.28□□□□□ -1.4
TPM4P67936 AC021193.1-201ENST00000511607 420 ntBASIC6.28□□□□□ -1.4
TPM4P67936 NR1I3-229ENST00000511748 480 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
TPM4P67936 HMGN1P17-201ENST00000513734 295 ntBASIC6.28□□□□□ -1.4
TPM4P67936 AC138517.1-201ENST00000515724 568 ntBASIC6.28□□□□□ -1.4
TPM4P67936 SEPT10P1-201ENST00000517342 1162 ntBASIC6.28□□□□□ -1.4
TPM4P67936 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
TPM4P67936 OR5AM1P-201ENST00000532136 1032 ntBASIC6.28□□□□□ -1.4
TPM4P67936 AC092332.1-201ENST00000563684 829 ntBASIC6.28□□□□□ -1.4
TPM4P67936 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC6.28□□□□□ -1.4
TPM4P67936 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC6.28□□□□□ -1.4
TPM4P67936 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC6.28□□□□□ -1.4
TPM4P67936 AC005244.1-201ENST00000582566 339 ntBASIC6.28□□□□□ -1.4
TPM4P67936 C17orf80-208ENST00000582793 531 ntTSL 2 BASIC6.28□□□□□ -1.4
TPM4P67936 H3F3BP2-201ENST00000583907 357 ntBASIC6.28□□□□□ -1.4
TPM4P67936 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC6.28□□□□□ -1.4
TPM4P67936 METTL23-207ENST00000588783 1184 ntTSL 5 BASIC6.28□□□□□ -1.4
TPM4P67936 AL512413.1-201ENST00000606489 382 ntBASIC6.28□□□□□ -1.4
TPM4P67936 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC6.28□□□□□ -1.4
TPM4P67936 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC6.28□□□□□ -1.4
TPM4P67936 AC012676.3-201ENST00000614983 479 ntBASIC6.28□□□□□ -1.4
TPM4P67936 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC6.28□□□□□ -1.4
TPM4P67936 uc_338.7-201ENST00000621834 124 ntBASIC6.28□□□□□ -1.4
TPM4P67936 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
TPM4P67936 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC6.28□□□□□ -1.4
TPM4P67936 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC6.28□□□□□ -1.4
TPM4P67936 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
TPM4P67936 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
TPM4P67936 CLHC1-204ENST00000407122 2139 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
TPM4P67936 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC6.28□□□□□ -1.4
TPM4P67936 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
TPM4P67936 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
TPM4P67936 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC6.27□□□□□ -1.41
TPM4P67936 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC6.27□□□□□ -1.41
TPM4P67936 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC6.27□□□□□ -1.41
TPM4P67936 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC6.27□□□□□ -1.41
TPM4P67936 OCM2-201ENST00000257627 696 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
TPM4P67936 RNA5SP198-201ENST00000410376 127 ntBASIC6.27□□□□□ -1.41
TPM4P67936 RNA5SP231-201ENST00000410496 138 ntBASIC6.27□□□□□ -1.41
TPM4P67936 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
TPM4P67936 RPL7P56-201ENST00000429441 717 ntBASIC6.27□□□□□ -1.41
TPM4P67936 AL513348.1-201ENST00000435554 440 ntTSL 3 BASIC6.27□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 176.1 ms