Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 MTND2P13-201ENST00000577438 1039 ntBASIC5.49□□□□□ -1.53
CLDN20P56880 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC5.49□□□□□ -1.53
CLDN20P56880 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC5.49□□□□□ -1.53
CLDN20P56880 AC020916.2-201ENST00000591242 360 ntBASIC5.49□□□□□ -1.53
CLDN20P56880 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
CLDN20P56880 AC079315.1-201ENST00000602952 623 ntBASIC5.49□□□□□ -1.53
CLDN20P56880 AC073488.3-201ENST00000631611 778 ntBASIC5.49□□□□□ -1.53
CLDN20P56880 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC5.49□□□□□ -1.53
CLDN20P56880 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC5.49□□□□□ -1.53
CLDN20P56880 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CLDN20P56880 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC5.49□□□□□ -1.53
CLDN20P56880 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
CLDN20P56880 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CLDN20P56880 DNM1P47-203ENST00000571780 12667 ntBASIC5.49□□□□□ -1.53
CLDN20P56880 AC027279.4-201ENST00000624371 2072 ntBASIC5.49□□□□□ -1.53
CLDN20P56880 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
CLDN20P56880 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CLDN20P56880 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
CLDN20P56880 CCNT2P1-201ENST00000423082 1315 ntBASIC5.48□□□□□ -1.53
CLDN20P56880 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC5.48□□□□□ -1.53
CLDN20P56880 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
CLDN20P56880 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC5.48□□□□□ -1.53
CLDN20P56880 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC5.48□□□□□ -1.53
CLDN20P56880 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CLDN20P56880 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC5.48□□□□□ -1.53
CLDN20P56880 AL078595.2-201ENST00000605309 1780 ntBASIC5.48□□□□□ -1.53
CLDN20P56880 AL132656.3-201ENST00000606384 1595 ntBASIC5.48□□□□□ -1.53
CLDN20P56880 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC5.48□□□□□ -1.53
CLDN20P56880 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC5.48□□□□□ -1.53
CLDN20P56880 UBE2V1P15-201ENST00000407776 448 ntBASIC5.48□□□□□ -1.53
CLDN20P56880 AC245096.1-201ENST00000413104 546 ntBASIC5.48□□□□□ -1.53
CLDN20P56880 VN1R31P-201ENST00000417498 730 ntBASIC5.48□□□□□ -1.53
CLDN20P56880 VTI1BP4-201ENST00000427516 527 ntBASIC5.48□□□□□ -1.53
CLDN20P56880 CCNB1IP1P1-201ENST00000428976 839 ntBASIC5.48□□□□□ -1.53
CLDN20P56880 GAPDHP34-201ENST00000432112 823 ntBASIC5.48□□□□□ -1.53
CLDN20P56880 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CLDN20P56880 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC5.48□□□□□ -1.53
CLDN20P56880 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC5.48□□□□□ -1.53
CLDN20P56880 LINC01035-201ENST00000445072 784 ntTSL 3 BASIC5.48□□□□□ -1.53
CLDN20P56880 HMGN1P2-201ENST00000445197 310 ntBASIC5.48□□□□□ -1.53
CLDN20P56880 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC5.48□□□□□ -1.53
CLDN20P56880 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC5.48□□□□□ -1.53
CLDN20P56880 B4GALNT2P1-201ENST00000508857 307 ntBASIC5.48□□□□□ -1.53
CLDN20P56880 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC5.48□□□□□ -1.53
CLDN20P56880 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC5.48□□□□□ -1.53
CLDN20P56880 PRMT5P1-201ENST00000514351 598 ntBASIC5.48□□□□□ -1.53
CLDN20P56880 RNA5SP340-201ENST00000517132 107 ntBASIC5.48□□□□□ -1.53
CLDN20P56880 SEC11B-201ENST00000518383 499 ntBASIC5.48□□□□□ -1.53
CLDN20P56880 TPT1-AS1-206ENST00000519454 709 ntTSL 5 BASIC5.48□□□□□ -1.53
CLDN20P56880 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC5.48□□□□□ -1.53
CLDN20P56880 AC027369.2-201ENST00000528030 440 ntBASIC5.48□□□□□ -1.53
CLDN20P56880 OR6M2P-201ENST00000529831 871 ntBASIC5.48□□□□□ -1.53
CLDN20P56880 LDHC-203ENST00000535809 757 ntTSL 5 BASIC5.48□□□□□ -1.53
CLDN20P56880 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC5.48□□□□□ -1.53
CLDN20P56880 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC5.48□□□□□ -1.53
CLDN20P56880 STARD6-202ENST00000577499 696 ntTSL 2 BASIC5.48□□□□□ -1.53
CLDN20P56880 AC027334.1-201ENST00000603257 310 ntBASIC5.48□□□□□ -1.53
CLDN20P56880 AL645933.2-201ENST00000606743 1207 ntBASIC5.48□□□□□ -1.53
CLDN20P56880 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
CLDN20P56880 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CLDN20P56880 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CLDN20P56880 BX284613.1-201ENST00000452221 1641 ntBASIC5.48□□□□□ -1.53
CLDN20P56880 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC5.48□□□□□ -1.53
CLDN20P56880 EEF1A1P21-201ENST00000512363 1344 ntBASIC5.48□□□□□ -1.53
CLDN20P56880 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CLDN20P56880 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
CLDN20P56880 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC5.47□□□□□ -1.53
CLDN20P56880 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC5.47□□□□□ -1.53
CLDN20P56880 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
CLDN20P56880 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC5.47□□□□□ -1.53
CLDN20P56880 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
CLDN20P56880 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
CLDN20P56880 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
CLDN20P56880 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC5.47□□□□□ -1.53
CLDN20P56880 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CLDN20P56880 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CLDN20P56880 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
CLDN20P56880 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
CLDN20P56880 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC5.47□□□□□ -1.53
CLDN20P56880 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
CLDN20P56880 RN7SKP275-201ENST00000364626 301 ntBASIC5.47□□□□□ -1.53
CLDN20P56880 SNORA27.3-201ENST00000364937 134 ntBASIC5.47□□□□□ -1.53
CLDN20P56880 PKIB-203ENST00000368446 556 ntTSL 2 BASIC5.47□□□□□ -1.53
CLDN20P56880 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
CLDN20P56880 AMZ2P2-201ENST00000406819 1057 ntBASIC5.47□□□□□ -1.53
CLDN20P56880 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC5.47□□□□□ -1.53
CLDN20P56880 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC5.47□□□□□ -1.53
CLDN20P56880 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CLDN20P56880 RPS15AP30-201ENST00000420976 390 ntBASIC5.47□□□□□ -1.53
CLDN20P56880 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC5.47□□□□□ -1.53
CLDN20P56880 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC5.47□□□□□ -1.53
CLDN20P56880 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CLDN20P56880 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CLDN20P56880 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC5.47□□□□□ -1.53
CLDN20P56880 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC5.47□□□□□ -1.53
CLDN20P56880 DNAJA1P5-201ENST00000440278 943 ntBASIC5.47□□□□□ -1.53
CLDN20P56880 AL691517.1-201ENST00000440833 1235 ntBASIC5.47□□□□□ -1.53
CLDN20P56880 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC5.47□□□□□ -1.53
CLDN20P56880 TXNP2-201ENST00000443918 295 ntBASIC5.47□□□□□ -1.53
CLDN20P56880 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC5.47□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 68.9 ms