Protein–RNA interactions for Protein: P56524

HDAC4, Histone deacetylase 4, humanhuman

Predictions only

Length 1,084 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4P56524 SNRPEP6-201ENST00000407465 277 ntBASIC6.22□□□□□ -1.41
HDAC4P56524 CPB2-AS1-201ENST00000415033 747 ntTSL 3 BASIC6.22□□□□□ -1.41
HDAC4P56524 RPL12P43-201ENST00000420608 499 ntBASIC6.22□□□□□ -1.41
HDAC4P56524 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC6.22□□□□□ -1.41
HDAC4P56524 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC6.22□□□□□ -1.41
HDAC4P56524 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
HDAC4P56524 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC6.22□□□□□ -1.41
HDAC4P56524 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
HDAC4P56524 RPS7P3-201ENST00000443360 580 ntBASIC6.22□□□□□ -1.41
HDAC4P56524 AL161722.1-201ENST00000446972 1032 ntBASIC6.22□□□□□ -1.41
HDAC4P56524 MTND6P5-201ENST00000448266 512 ntBASIC6.22□□□□□ -1.41
HDAC4P56524 TPRKBP1-201ENST00000456243 481 ntBASIC6.22□□□□□ -1.41
HDAC4P56524 AC009963.3-201ENST00000458090 486 ntBASIC6.22□□□□□ -1.41
HDAC4P56524 snoU13.29-201ENST00000459370 104 ntBASIC6.22□□□□□ -1.41
HDAC4P56524 RABGAP1L-214ENST00000478442 648 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
HDAC4P56524 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC6.22□□□□□ -1.41
HDAC4P56524 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC6.22□□□□□ -1.41
HDAC4P56524 TOMM22P4-201ENST00000511318 336 ntBASIC6.22□□□□□ -1.41
HDAC4P56524 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC6.22□□□□□ -1.41
HDAC4P56524 RN7SKP238-201ENST00000516483 249 ntBASIC6.22□□□□□ -1.41
HDAC4P56524 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC6.22□□□□□ -1.41
HDAC4P56524 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC6.22□□□□□ -1.41
HDAC4P56524 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC6.22□□□□□ -1.41
HDAC4P56524 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC6.22□□□□□ -1.41
HDAC4P56524 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
HDAC4P56524 MED21-206ENST00000546323 575 ntTSL 3 BASIC6.22□□□□□ -1.41
HDAC4P56524 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC6.22□□□□□ -1.41
HDAC4P56524 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
HDAC4P56524 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC6.22□□□□□ -1.41
HDAC4P56524 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC6.22□□□□□ -1.41
HDAC4P56524 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC6.22□□□□□ -1.41
HDAC4P56524 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC6.22□□□□□ -1.41
HDAC4P56524 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
HDAC4P56524 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC6.22□□□□□ -1.41
HDAC4P56524 AC079315.1-201ENST00000602952 623 ntBASIC6.22□□□□□ -1.41
HDAC4P56524 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
HDAC4P56524 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC6.22□□□□□ -1.41
HDAC4P56524 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC6.22□□□□□ -1.41
HDAC4P56524 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC6.22□□□□□ -1.41
HDAC4P56524 MAPK10-350ENST00000641777 965 ntBASIC6.22□□□□□ -1.41
HDAC4P56524 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
HDAC4P56524 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC6.22□□□□□ -1.41
HDAC4P56524 AC093225.1-201ENST00000506867 1408 ntBASIC6.22□□□□□ -1.41
HDAC4P56524 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
HDAC4P56524 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC6.22□□□□□ -1.41
HDAC4P56524 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
HDAC4P56524 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC6.22□□□□□ -1.41
HDAC4P56524 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC6.22□□□□□ -1.41
HDAC4P56524 AC130304.1-201ENST00000622942 2385 ntBASIC6.22□□□□□ -1.41
HDAC4P56524 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
HDAC4P56524 OR8D4-201ENST00000321355 1331 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
HDAC4P56524 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
HDAC4P56524 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC6.22□□□□□ -1.41
HDAC4P56524 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.41
HDAC4P56524 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC6.21□□□□□ -1.41
HDAC4P56524 AC007842.1-201ENST00000597336 2039 ntBASIC6.21□□□□□ -1.41
HDAC4P56524 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
HDAC4P56524 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
HDAC4P56524 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC6.21□□□□□ -1.41
HDAC4P56524 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC6.21□□□□□ -1.41
HDAC4P56524 TNFSF11-202ENST00000358545 1520 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
HDAC4P56524 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
HDAC4P56524 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
HDAC4P56524 COX6B1P3-201ENST00000312310 260 ntBASIC6.21□□□□□ -1.42
HDAC4P56524 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
HDAC4P56524 AL354890.1-201ENST00000413730 346 ntBASIC6.21□□□□□ -1.42
HDAC4P56524 CASP5-203ENST00000418434 1023 ntTSL 5 BASIC6.21□□□□□ -1.42
HDAC4P56524 KIF4CP-201ENST00000422742 1279 ntBASIC6.21□□□□□ -1.42
HDAC4P56524 AC099677.3-201ENST00000427081 395 ntBASIC6.21□□□□□ -1.42
HDAC4P56524 TRIM60P13-201ENST00000432350 1283 ntBASIC6.21□□□□□ -1.42
HDAC4P56524 RPL12P18-201ENST00000437175 325 ntBASIC6.21□□□□□ -1.42
HDAC4P56524 RPS12P17-201ENST00000438591 377 ntBASIC6.21□□□□□ -1.42
HDAC4P56524 AL390879.1-201ENST00000439143 386 ntBASIC6.21□□□□□ -1.42
HDAC4P56524 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC6.21□□□□□ -1.42
HDAC4P56524 AL500527.1-201ENST00000448532 255 ntBASIC6.21□□□□□ -1.42
HDAC4P56524 OR6C72P-201ENST00000451403 892 ntBASIC6.21□□□□□ -1.42
HDAC4P56524 AL513343.1-201ENST00000451818 792 ntBASIC6.21□□□□□ -1.42
HDAC4P56524 PPIAP27-201ENST00000453800 265 ntBASIC6.21□□□□□ -1.42
HDAC4P56524 AC023245.1-201ENST00000468501 517 ntBASIC6.21□□□□□ -1.42
HDAC4P56524 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC6.21□□□□□ -1.42
HDAC4P56524 AC008629.2-201ENST00000503783 483 ntBASIC6.21□□□□□ -1.42
HDAC4P56524 UGT2A3P7-201ENST00000510485 734 ntBASIC6.21□□□□□ -1.42
HDAC4P56524 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC6.21□□□□□ -1.42
HDAC4P56524 AC013724.1-201ENST00000511962 783 ntTSL 2 BASIC6.21□□□□□ -1.42
HDAC4P56524 RN7SKP288-201ENST00000516227 268 ntBASIC6.21□□□□□ -1.42
HDAC4P56524 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC6.21□□□□□ -1.42
HDAC4P56524 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC6.21□□□□□ -1.42
HDAC4P56524 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC6.21□□□□□ -1.42
HDAC4P56524 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC6.21□□□□□ -1.42
HDAC4P56524 CYCSP38-201ENST00000559840 322 ntBASIC6.21□□□□□ -1.42
HDAC4P56524 AC116158.1-201ENST00000560231 2129 ntBASIC6.21□□□□□ -1.42
HDAC4P56524 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC6.21□□□□□ -1.42
HDAC4P56524 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC6.21□□□□□ -1.42
HDAC4P56524 AC002310.3-201ENST00000569728 723 ntBASIC6.21□□□□□ -1.42
HDAC4P56524 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC6.21□□□□□ -1.42
HDAC4P56524 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC6.21□□□□□ -1.42
HDAC4P56524 AC012254.3-201ENST00000591183 2117 ntBASIC6.21□□□□□ -1.42
HDAC4P56524 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC6.21□□□□□ -1.42
HDAC4P56524 AC020915.5-201ENST00000596836 964 ntBASIC6.21□□□□□ -1.42
HDAC4P56524 AL023583.1-201ENST00000607518 1143 ntBASIC6.21□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 88.6 ms