Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 MTCYBP32-201ENST00000427945 1084 ntBASIC5.54□□□□□ -1.52
CDH12P55289 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC5.54□□□□□ -1.52
CDH12P55289 AC064862.5-201ENST00000440618 334 ntBASIC5.54□□□□□ -1.52
CDH12P55289 LINC02384-202ENST00000441255 567 ntTSL 4 BASIC5.54□□□□□ -1.52
CDH12P55289 SMIM30-204ENST00000441359 962 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
CDH12P55289 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC5.54□□□□□ -1.52
CDH12P55289 TVP23BP2-201ENST00000455082 615 ntBASIC5.54□□□□□ -1.52
CDH12P55289 H3F3AP5-201ENST00000475267 429 ntBASIC5.54□□□□□ -1.52
CDH12P55289 AC079080.1-201ENST00000479841 822 ntBASIC5.54□□□□□ -1.52
CDH12P55289 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC5.54□□□□□ -1.52
CDH12P55289 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CDH12P55289 RN7SL284P-201ENST00000498823 275 ntBASIC5.54□□□□□ -1.52
CDH12P55289 LINC02114-201ENST00000503757 801 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CDH12P55289 AC093801.2-201ENST00000503966 1050 ntBASIC5.54□□□□□ -1.52
CDH12P55289 HMGN1P16-201ENST00000508308 283 ntBASIC5.54□□□□□ -1.52
CDH12P55289 AC112198.4-201ENST00000515450 351 ntBASIC5.54□□□□□ -1.52
CDH12P55289 RNU6-1334P-201ENST00000516032 105 ntBASIC5.54□□□□□ -1.52
CDH12P55289 SCARNA1-201ENST00000517138 166 ntBASIC5.54□□□□□ -1.52
CDH12P55289 OR4V1P-201ENST00000525394 1140 ntBASIC5.54□□□□□ -1.52
CDH12P55289 AC036111.2-201ENST00000533247 901 ntBASIC5.54□□□□□ -1.52
CDH12P55289 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC5.54□□□□□ -1.52
CDH12P55289 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC5.54□□□□□ -1.52
CDH12P55289 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC5.54□□□□□ -1.52
CDH12P55289 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC5.54□□□□□ -1.52
CDH12P55289 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC5.54□□□□□ -1.52
CDH12P55289 AC060780.2-201ENST00000589047 198 ntBASIC5.54□□□□□ -1.52
CDH12P55289 AC119403.2-201ENST00000590960 598 ntBASIC5.54□□□□□ -1.52
CDH12P55289 AC245884.10-201ENST00000597355 337 ntBASIC5.54□□□□□ -1.52
CDH12P55289 AC133794.1-201ENST00000602731 914 ntBASIC5.54□□□□□ -1.52
CDH12P55289 AC016597.2-201ENST00000613256 341 ntBASIC5.54□□□□□ -1.52
CDH12P55289 AC097641.3-201ENST00000613523 464 ntBASIC5.54□□□□□ -1.52
CDH12P55289 Metazoa_SRP.38-201ENST00000615981 254 ntBASIC5.54□□□□□ -1.52
CDH12P55289 AC022960.3-201ENST00000619794 441 ntBASIC5.54□□□□□ -1.52
CDH12P55289 AL138693.1-201ENST00000622219 129 ntBASIC5.54□□□□□ -1.52
CDH12P55289 AC097460.3-201ENST00000623099 442 ntBASIC5.54□□□□□ -1.52
CDH12P55289 AC009120.7-201ENST00000623452 780 ntBASIC5.54□□□□□ -1.52
CDH12P55289 AC090772.4-201ENST00000623599 362 ntBASIC5.54□□□□□ -1.52
CDH12P55289 AC084816.1-204ENST00000628326 631 ntTSL 5 BASIC5.54□□□□□ -1.52
CDH12P55289 AC007603.3-201ENST00000636915 979 ntBASIC5.54□□□□□ -1.52
CDH12P55289 ATM-229ENST00000639953 587 ntTSL 5 BASIC5.54□□□□□ -1.52
CDH12P55289 SERPINB7-206ENST00000540675 2193 ntTSL 2 BASIC5.54□□□□□ -1.52
CDH12P55289 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
CDH12P55289 LINC01602-201ENST00000522992 2109 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CDH12P55289 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CDH12P55289 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CDH12P55289 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC5.54□□□□□ -1.52
CDH12P55289 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC5.54□□□□□ -1.52
CDH12P55289 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
CDH12P55289 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CDH12P55289 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
CDH12P55289 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.53□□□□□ -1.52
CDH12P55289 AC022325.1-201ENST00000502748 2199 ntBASIC5.53□□□□□ -1.52
CDH12P55289 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CDH12P55289 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CDH12P55289 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CDH12P55289 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CDH12P55289 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC5.53□□□□□ -1.52
CDH12P55289 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
CDH12P55289 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
CDH12P55289 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC5.53□□□□□ -1.52
CDH12P55289 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CDH12P55289 OR4K17-201ENST00000315543 1032 ntBASIC5.53□□□□□ -1.52
CDH12P55289 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CDH12P55289 MIR365B-201ENST00000362317 111 ntBASIC5.53□□□□□ -1.52
CDH12P55289 RNU105B-201ENST00000364478 208 ntBASIC5.53□□□□□ -1.52
CDH12P55289 SNORD115-48-201ENST00000364764 76 ntBASIC5.53□□□□□ -1.52
CDH12P55289 FCGR1B-202ENST00000369383 570 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CDH12P55289 MIR551B-201ENST00000384984 96 ntBASIC5.53□□□□□ -1.52
CDH12P55289 CXADRP1-201ENST00000398098 1095 ntBASIC5.53□□□□□ -1.52
CDH12P55289 RNA5SP156-201ENST00000410250 110 ntBASIC5.53□□□□□ -1.52
CDH12P55289 RAB9AP4-201ENST00000415230 609 ntBASIC5.53□□□□□ -1.52
CDH12P55289 RPS7P8-201ENST00000418311 581 ntBASIC5.53□□□□□ -1.52
CDH12P55289 AL445465.1-208ENST00000419709 506 ntTSL 3 BASIC5.53□□□□□ -1.52
CDH12P55289 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC5.53□□□□□ -1.52
CDH12P55289 MORF4L1P7-201ENST00000426038 703 ntBASIC5.53□□□□□ -1.52
CDH12P55289 AC244453.3-201ENST00000426275 459 ntTSL 5 BASIC5.53□□□□□ -1.52
CDH12P55289 PSMD10P2-201ENST00000432890 672 ntBASIC5.53□□□□□ -1.52
CDH12P55289 AL513348.1-201ENST00000435554 440 ntTSL 3 BASIC5.53□□□□□ -1.52
CDH12P55289 AL590399.4-201ENST00000436561 601 ntBASIC5.53□□□□□ -1.52
CDH12P55289 LINC00328-2P-201ENST00000436585 219 ntBASIC5.53□□□□□ -1.52
CDH12P55289 ELOCP3-201ENST00000439303 348 ntBASIC5.53□□□□□ -1.52
CDH12P55289 ARL5AP3-201ENST00000439327 386 ntBASIC5.53□□□□□ -1.52
CDH12P55289 RPL12P49-201ENST00000441100 121 ntBASIC5.53□□□□□ -1.52
CDH12P55289 AC007000.2-201ENST00000442564 487 ntBASIC5.53□□□□□ -1.52
CDH12P55289 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC5.53□□□□□ -1.52
CDH12P55289 SUMO2P1-206ENST00000445436 284 ntBASIC5.53□□□□□ -1.52
CDH12P55289 AL590004.3-202ENST00000445883 451 ntBASIC5.53□□□□□ -1.52
CDH12P55289 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CDH12P55289 OR52I1-201ENST00000450052 1050 ntBASIC5.53□□□□□ -1.52
CDH12P55289 RSU1P1-201ENST00000453416 441 ntBASIC5.53□□□□□ -1.52
CDH12P55289 AC004890.1-201ENST00000461005 181 ntBASIC5.53□□□□□ -1.52
CDH12P55289 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CDH12P55289 AC022336.1-201ENST00000475510 337 ntBASIC5.53□□□□□ -1.52
CDH12P55289 RN7SL836P-201ENST00000476140 296 ntBASIC5.53□□□□□ -1.52
CDH12P55289 CPHL1P-204ENST00000482639 584 ntTSL 5 BASIC5.53□□□□□ -1.52
CDH12P55289 RPL23AP73-201ENST00000492507 471 ntBASIC5.53□□□□□ -1.52
CDH12P55289 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC5.53□□□□□ -1.52
CDH12P55289 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC5.53□□□□□ -1.52
CDH12P55289 SNX18P25-201ENST00000510539 758 ntBASIC5.53□□□□□ -1.52
CDH12P55289 NR1I3-229ENST00000511748 480 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 85.1 ms