Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
VCPP55072 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
VCPP55072 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
VCPP55072 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
VCPP55072 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
VCPP55072 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC6.33□□□□□ -1.4
VCPP55072 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
VCPP55072 OR2J1-201ENST00000377171 1273 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
VCPP55072 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
VCPP55072 AL121977.1-201ENST00000401636 979 ntBASIC6.33□□□□□ -1.4
VCPP55072 PTCD2P2-201ENST00000415579 1095 ntBASIC6.33□□□□□ -1.4
VCPP55072 RPL35AP31-201ENST00000418340 337 ntBASIC6.33□□□□□ -1.4
VCPP55072 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC6.33□□□□□ -1.4
VCPP55072 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC6.33□□□□□ -1.4
VCPP55072 AC002504.1-201ENST00000438281 691 ntBASIC6.33□□□□□ -1.4
VCPP55072 FTLP8-201ENST00000446770 267 ntBASIC6.33□□□□□ -1.4
VCPP55072 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC6.33□□□□□ -1.4
VCPP55072 RPL23AP60-201ENST00000450011 454 ntBASIC6.33□□□□□ -1.4
VCPP55072 RN7SL352P-201ENST00000466002 277 ntBASIC6.33□□□□□ -1.4
VCPP55072 AC008953.1-201ENST00000497334 318 ntBASIC6.33□□□□□ -1.4
VCPP55072 AC093763.2-201ENST00000505334 1223 ntBASIC6.33□□□□□ -1.4
VCPP55072 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC6.33□□□□□ -1.4
VCPP55072 SETP21-201ENST00000514799 892 ntBASIC6.33□□□□□ -1.4
VCPP55072 RNA5SP92-201ENST00000516437 110 ntBASIC6.33□□□□□ -1.4
VCPP55072 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC6.33□□□□□ -1.4
VCPP55072 AC021733.2-201ENST00000518830 497 ntBASIC6.33□□□□□ -1.4
VCPP55072 TPM3P3-201ENST00000521343 354 ntBASIC6.33□□□□□ -1.4
VCPP55072 OR4A46P-201ENST00000527255 933 ntBASIC6.33□□□□□ -1.4
VCPP55072 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
VCPP55072 AC244502.2-201ENST00000543361 851 ntBASIC6.33□□□□□ -1.4
VCPP55072 AL049779.3-201ENST00000557141 606 ntBASIC6.33□□□□□ -1.4
VCPP55072 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC6.33□□□□□ -1.4
VCPP55072 AC005244.1-201ENST00000582566 339 ntBASIC6.33□□□□□ -1.4
VCPP55072 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
VCPP55072 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC6.33□□□□□ -1.4
VCPP55072 AC012557.1-201ENST00000607115 611 ntBASIC6.33□□□□□ -1.4
VCPP55072 SAMMSON-227ENST00000642114 1199 ntBASIC6.33□□□□□ -1.4
VCPP55072 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
VCPP55072 DCN-218ENST00000551354 2924 ntTSL 3 BASIC6.33□□□□□ -1.4
VCPP55072 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
VCPP55072 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC6.33□□□□□ -1.4
VCPP55072 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC6.33□□□□□ -1.4
VCPP55072 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
VCPP55072 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
VCPP55072 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
VCPP55072 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC6.32□□□□□ -1.4
VCPP55072 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
VCPP55072 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
VCPP55072 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
VCPP55072 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
VCPP55072 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
VCPP55072 AK3-201ENST00000359883 1536 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
VCPP55072 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
VCPP55072 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
VCPP55072 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.32□□□□□ -1.4
VCPP55072 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
VCPP55072 MIR375-201ENST00000362103 64 ntBASIC6.32□□□□□ -1.4
VCPP55072 SNORD1C-201ENST00000363315 78 ntBASIC6.32□□□□□ -1.4
VCPP55072 RNU6-673P-201ENST00000365084 104 ntBASIC6.32□□□□□ -1.4
VCPP55072 OR2L2-201ENST00000366479 1134 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
VCPP55072 CRP-204ENST00000368112 787 ntTSL 2 BASIC6.32□□□□□ -1.4
VCPP55072 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.32□□□□□ -1.4
VCPP55072 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.32□□□□□ -1.4
VCPP55072 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC6.32□□□□□ -1.4
VCPP55072 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC6.32□□□□□ -1.4
VCPP55072 RPL34P3-201ENST00000421454 338 ntBASIC6.32□□□□□ -1.4
VCPP55072 AC092651.1-201ENST00000426110 312 ntBASIC6.32□□□□□ -1.4
VCPP55072 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC6.32□□□□□ -1.4
VCPP55072 CFL1P1-202ENST00000432948 411 ntBASIC6.32□□□□□ -1.4
VCPP55072 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC6.32□□□□□ -1.4
VCPP55072 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC6.32□□□□□ -1.4
VCPP55072 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
VCPP55072 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC6.32□□□□□ -1.4
VCPP55072 AC074087.1-201ENST00000512059 724 ntBASIC6.32□□□□□ -1.4
VCPP55072 WBP1LP3-201ENST00000523033 208 ntBASIC6.32□□□□□ -1.4
VCPP55072 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
VCPP55072 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
VCPP55072 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC6.32□□□□□ -1.4
VCPP55072 ELOCP28-201ENST00000590044 317 ntBASIC6.32□□□□□ -1.4
VCPP55072 CT45A1-201ENST00000594117 1087 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
VCPP55072 AC141002.1-201ENST00000607025 279 ntBASIC6.32□□□□□ -1.4
VCPP55072 MVP-219ENST00000629059 120 ntTSL 5 BASIC6.32□□□□□ -1.4
VCPP55072 AP001153.1-201ENST00000641024 338 ntBASIC6.32□□□□□ -1.4
VCPP55072 STK3-216ENST00000523601 3107 ntTSL 2 BASIC6.32□□□□□ -1.4
VCPP55072 AC015799.1-201ENST00000622996 3122 ntBASIC6.32□□□□□ -1.4
VCPP55072 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
VCPP55072 AC016583.1-201ENST00000624221 2431 ntBASIC6.32□□□□□ -1.4
VCPP55072 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
VCPP55072 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
VCPP55072 NLN-202ENST00000502464 8354 ntTSL 5 BASIC6.32□□□□□ -1.4
VCPP55072 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
VCPP55072 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
VCPP55072 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC6.32□□□□□ -1.4
VCPP55072 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
VCPP55072 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC6.32□□□□□ -1.4
VCPP55072 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
VCPP55072 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC6.32□□□□□ -1.4
VCPP55072 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC6.31□□□□□ -1.4
VCPP55072 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
VCPP55072 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 69.6 ms