Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC6.36□□□□□ -1.39
COPAP53621 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
COPAP53621 SNORA81.2-201ENST00000516868 170 ntBASIC6.36□□□□□ -1.39
COPAP53621 IGKV1D-22-201ENST00000518953 324 ntBASIC6.36□□□□□ -1.39
COPAP53621 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC6.36□□□□□ -1.39
COPAP53621 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
COPAP53621 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
COPAP53621 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC6.36□□□□□ -1.39
COPAP53621 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
COPAP53621 AC083837.1-201ENST00000565297 2994 ntBASIC6.36□□□□□ -1.39
COPAP53621 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC6.36□□□□□ -1.39
COPAP53621 AC233702.7-202ENST00000582941 211 ntBASIC6.36□□□□□ -1.39
COPAP53621 MIR4420-201ENST00000583944 77 ntBASIC6.36□□□□□ -1.39
COPAP53621 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC6.36□□□□□ -1.39
COPAP53621 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC6.36□□□□□ -1.39
COPAP53621 KATNBL1P5-201ENST00000605015 517 ntBASIC6.36□□□□□ -1.39
COPAP53621 AC012213.4-201ENST00000606457 354 ntBASIC6.36□□□□□ -1.39
COPAP53621 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC6.36□□□□□ -1.39
COPAP53621 AL391834.1-201ENST00000609609 560 ntBASIC6.36□□□□□ -1.39
COPAP53621 AL096712.1-201ENST00000614561 159 ntBASIC6.36□□□□□ -1.39
COPAP53621 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC6.36□□□□□ -1.39
COPAP53621 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
COPAP53621 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC6.36□□□□□ -1.39
COPAP53621 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
COPAP53621 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC6.36□□□□□ -1.39
COPAP53621 AC015689.2-201ENST00000528172 1738 ntBASIC6.36□□□□□ -1.39
COPAP53621 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
COPAP53621 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
COPAP53621 AC007744.1-201ENST00000607540 2289 ntTSL 5 BASIC6.36□□□□□ -1.39
COPAP53621 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
COPAP53621 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
COPAP53621 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC6.35□□□□□ -1.39
COPAP53621 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
COPAP53621 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
COPAP53621 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
COPAP53621 SLC9B1P1-201ENST00000331172 1337 ntBASIC6.35□□□□□ -1.39
COPAP53621 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC6.35□□□□□ -1.39
COPAP53621 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC6.35□□□□□ -1.39
COPAP53621 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
COPAP53621 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
COPAP53621 AL355143.1-201ENST00000407101 841 ntBASIC6.35□□□□□ -1.39
COPAP53621 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC6.35□□□□□ -1.39
COPAP53621 TEX50-201ENST00000417563 821 ntAPPRIS P1 TSL 2 BASIC6.35□□□□□ -1.39
COPAP53621 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
COPAP53621 AC023141.3-201ENST00000436698 278 ntBASIC6.35□□□□□ -1.39
COPAP53621 LINC01449-201ENST00000440213 1220 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
COPAP53621 VN1R38P-201ENST00000450265 887 ntBASIC6.35□□□□□ -1.39
COPAP53621 SLC25A51P1-201ENST00000468432 871 ntBASIC6.35□□□□□ -1.39
COPAP53621 AC093663.2-201ENST00000484625 313 ntBASIC6.35□□□□□ -1.39
COPAP53621 OR9N1P-202ENST00000494289 481 ntBASIC6.35□□□□□ -1.39
COPAP53621 DUBR-205ENST00000495228 411 ntTSL 2 BASIC6.35□□□□□ -1.39
COPAP53621 AL158068.1-201ENST00000506116 616 ntBASIC6.35□□□□□ -1.39
COPAP53621 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC6.35□□□□□ -1.39
COPAP53621 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC6.35□□□□□ -1.39
COPAP53621 AC106785.3-201ENST00000564064 847 ntBASIC6.35□□□□□ -1.39
COPAP53621 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC6.35□□□□□ -1.39
COPAP53621 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC6.35□□□□□ -1.39
COPAP53621 AP001823.1-201ENST00000604056 1003 ntBASIC6.35□□□□□ -1.39
COPAP53621 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC6.35□□□□□ -1.39
COPAP53621 RSU1P2-204ENST00000619977 1240 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
COPAP53621 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC6.35□□□□□ -1.39
COPAP53621 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
COPAP53621 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC6.35□□□□□ -1.39
COPAP53621 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
COPAP53621 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
COPAP53621 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
COPAP53621 DMD-228ENST00000541735 7080 ntTSL 5 BASIC6.35□□□□□ -1.39
COPAP53621 ALB-214ENST00000509063 1911 ntTSL 5 BASIC6.35□□□□□ -1.39
COPAP53621 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
COPAP53621 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC6.34□□□□□ -1.39
COPAP53621 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC6.34□□□□□ -1.39
COPAP53621 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC6.34□□□□□ -1.39
COPAP53621 EIF3EP1-201ENST00000433978 1316 ntBASIC6.34□□□□□ -1.39
COPAP53621 AC027279.1-201ENST00000568885 4284 ntBASIC6.34□□□□□ -1.39
COPAP53621 AL731532.1-201ENST00000623972 4236 ntBASIC6.34□□□□□ -1.39
COPAP53621 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
COPAP53621 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
COPAP53621 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
COPAP53621 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
COPAP53621 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
COPAP53621 LYPLA1P3-201ENST00000402650 695 ntBASIC6.34□□□□□ -1.39
COPAP53621 RN7SKP144-201ENST00000411108 279 ntBASIC6.34□□□□□ -1.39
COPAP53621 RPS26P38-201ENST00000414476 348 ntBASIC6.34□□□□□ -1.39
COPAP53621 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC6.34□□□□□ -1.39
COPAP53621 AC096669.1-201ENST00000422203 648 ntTSL 5 BASIC6.34□□□□□ -1.39
COPAP53621 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC6.34□□□□□ -1.39
COPAP53621 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC6.34□□□□□ -1.39
COPAP53621 ZNF965P-201ENST00000432501 817 ntBASIC6.34□□□□□ -1.39
COPAP53621 BX679664.2-201ENST00000439282 283 ntBASIC6.34□□□□□ -1.39
COPAP53621 Z99127.2-201ENST00000441426 334 ntBASIC6.34□□□□□ -1.39
COPAP53621 RNF2P1-201ENST00000442955 1010 ntBASIC6.34□□□□□ -1.39
COPAP53621 CYCSP51-201ENST00000443545 318 ntBASIC6.34□□□□□ -1.39
COPAP53621 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC6.34□□□□□ -1.39
COPAP53621 SNX18P26-201ENST00000458433 740 ntBASIC6.34□□□□□ -1.39
COPAP53621 AC084754.1-201ENST00000463466 464 ntBASIC6.34□□□□□ -1.39
COPAP53621 CABYRP1-201ENST00000465493 1045 ntBASIC6.34□□□□□ -1.39
COPAP53621 AC114728.1-201ENST00000488289 483 ntBASIC6.34□□□□□ -1.39
COPAP53621 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
COPAP53621 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC6.34□□□□□ -1.39
COPAP53621 AC093763.2-201ENST00000505334 1223 ntBASIC6.34□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 79.3 ms