Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
PDX1P52945 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
PDX1P52945 TTC41P-205ENST00000551270 3963 ntBASIC5.7□□□□□ -1.5
PDX1P52945 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.7□□□□□ -1.5
PDX1P52945 AP004289.1-201ENST00000436307 2205 ntBASIC5.7□□□□□ -1.5
PDX1P52945 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
PDX1P52945 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
PDX1P52945 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC5.7□□□□□ -1.5
PDX1P52945 BPIFC-201ENST00000300399 1980 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
PDX1P52945 OR9K1P-201ENST00000326513 941 ntBASIC5.7□□□□□ -1.5
PDX1P52945 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC5.7□□□□□ -1.5
PDX1P52945 MRPL53P1-201ENST00000414323 319 ntBASIC5.7□□□□□ -1.5
PDX1P52945 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC5.7□□□□□ -1.5
PDX1P52945 AK4P4-201ENST00000419465 646 ntBASIC5.7□□□□□ -1.5
PDX1P52945 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
PDX1P52945 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC5.7□□□□□ -1.5
PDX1P52945 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC5.7□□□□□ -1.5
PDX1P52945 AL451063.1-201ENST00000450164 1133 ntBASIC5.7□□□□□ -1.5
PDX1P52945 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC5.7□□□□□ -1.5
PDX1P52945 HNRNPDLP2-201ENST00000455248 751 ntBASIC5.7□□□□□ -1.5
PDX1P52945 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC5.7□□□□□ -1.5
PDX1P52945 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC5.7□□□□□ -1.5
PDX1P52945 AC104164.1-201ENST00000460282 590 ntBASIC5.7□□□□□ -1.5
PDX1P52945 RN7SL515P-201ENST00000463999 297 ntBASIC5.7□□□□□ -1.5
PDX1P52945 SEPT7P6-201ENST00000469999 1143 ntBASIC5.7□□□□□ -1.5
PDX1P52945 AC090589.1-201ENST00000473109 362 ntBASIC5.7□□□□□ -1.5
PDX1P52945 AC083795.1-201ENST00000491760 320 ntBASIC5.7□□□□□ -1.5
PDX1P52945 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC5.7□□□□□ -1.5
PDX1P52945 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC5.7□□□□□ -1.5
PDX1P52945 DUTP7-201ENST00000507982 486 ntBASIC5.7□□□□□ -1.5
PDX1P52945 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC5.7□□□□□ -1.5
PDX1P52945 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC5.7□□□□□ -1.5
PDX1P52945 AC090572.2-201ENST00000520649 761 ntTSL 3 BASIC5.7□□□□□ -1.5
PDX1P52945 AC008429.4-201ENST00000521201 182 ntBASIC5.7□□□□□ -1.5
PDX1P52945 NSMCE2-210ENST00000522563 1037 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
PDX1P52945 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC5.7□□□□□ -1.5
PDX1P52945 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC5.7□□□□□ -1.5
PDX1P52945 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC5.7□□□□□ -1.5
PDX1P52945 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC5.7□□□□□ -1.5
PDX1P52945 FO393422.1-201ENST00000603908 708 ntBASIC5.7□□□□□ -1.5
PDX1P52945 GMCL1P2-201ENST00000605230 823 ntBASIC5.7□□□□□ -1.5
PDX1P52945 AC004890.3-201ENST00000605566 1095 ntBASIC5.7□□□□□ -1.5
PDX1P52945 AC100814.1-201ENST00000606963 623 ntBASIC5.7□□□□□ -1.5
PDX1P52945 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC5.7□□□□□ -1.5
PDX1P52945 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC5.7□□□□□ -1.5
PDX1P52945 AC069234.4-201ENST00000621276 412 ntBASIC5.7□□□□□ -1.5
PDX1P52945 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC5.7□□□□□ -1.5
PDX1P52945 AC020763.5-201ENST00000623298 430 ntBASIC5.7□□□□□ -1.5
PDX1P52945 AC022919.1-201ENST00000624979 626 ntBASIC5.7□□□□□ -1.5
PDX1P52945 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
PDX1P52945 PARP4P2-201ENST00000446672 3326 ntBASIC5.7□□□□□ -1.5
PDX1P52945 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
PDX1P52945 AP002478.1-201ENST00000577848 1455 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
PDX1P52945 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.7□□□□□ -1.5
PDX1P52945 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC5.7□□□□□ -1.5
PDX1P52945 MAPK10-261ENST00000641050 3109 ntBASIC5.7□□□□□ -1.5
PDX1P52945 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC5.7□□□□□ -1.5
PDX1P52945 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
PDX1P52945 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
PDX1P52945 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
PDX1P52945 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
PDX1P52945 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.69□□□□□ -1.5
PDX1P52945 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
PDX1P52945 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
PDX1P52945 AL121835.1-201ENST00000404250 354 ntBASIC5.69□□□□□ -1.5
PDX1P52945 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC5.69□□□□□ -1.5
PDX1P52945 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC5.69□□□□□ -1.5
PDX1P52945 AL596448.1-201ENST00000415024 392 ntBASIC5.69□□□□□ -1.5
PDX1P52945 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
PDX1P52945 AC013268.2-201ENST00000420753 337 ntBASIC5.69□□□□□ -1.5
PDX1P52945 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC5.69□□□□□ -1.5
PDX1P52945 AL662874.1-201ENST00000426065 230 ntBASIC5.69□□□□□ -1.5
PDX1P52945 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC5.69□□□□□ -1.5
PDX1P52945 MRPS21P3-201ENST00000436696 262 ntBASIC5.69□□□□□ -1.5
PDX1P52945 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC5.69□□□□□ -1.5
PDX1P52945 AC026348.1-201ENST00000462549 1053 ntBASIC5.69□□□□□ -1.5
PDX1P52945 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC5.69□□□□□ -1.5
PDX1P52945 AC112184.1-201ENST00000505179 312 ntBASIC5.69□□□□□ -1.5
PDX1P52945 AC108941.2-201ENST00000506796 716 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
PDX1P52945 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC5.69□□□□□ -1.5
PDX1P52945 AC079015.1-201ENST00000521793 596 ntTSL 2 BASIC5.69□□□□□ -1.5
PDX1P52945 AP003080.1-202ENST00000526526 915 ntBASIC5.69□□□□□ -1.5
PDX1P52945 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC5.69□□□□□ -1.5
PDX1P52945 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC5.69□□□□□ -1.5
PDX1P52945 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC5.69□□□□□ -1.5
PDX1P52945 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC5.69□□□□□ -1.5
PDX1P52945 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC5.69□□□□□ -1.5
PDX1P52945 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC5.69□□□□□ -1.5
PDX1P52945 MIR4505-201ENST00000582238 73 ntBASIC5.69□□□□□ -1.5
PDX1P52945 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC5.69□□□□□ -1.5
PDX1P52945 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC5.69□□□□□ -1.5
PDX1P52945 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
PDX1P52945 AC119403.2-201ENST00000590960 598 ntBASIC5.69□□□□□ -1.5
PDX1P52945 MIR132-201ENST00000591554 101 ntBASIC5.69□□□□□ -1.5
PDX1P52945 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC5.69□□□□□ -1.5
PDX1P52945 AC239803.2-201ENST00000610161 430 ntBASIC5.69□□□□□ -1.5
PDX1P52945 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC5.69□□□□□ -1.5
PDX1P52945 RN7SL544P-201ENST00000617232 284 ntBASIC5.69□□□□□ -1.5
PDX1P52945 RN7SL763P-201ENST00000620922 284 ntBASIC5.69□□□□□ -1.5
PDX1P52945 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC5.69□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 84 ms