Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 AL162739.1-201ENST00000450606 307 ntBASIC5.7□□□□□ -1.5
CXCL12P48061 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC5.7□□□□□ -1.5
CXCL12P48061 AC090142.2-201ENST00000483263 416 ntBASIC5.7□□□□□ -1.5
CXCL12P48061 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC5.7□□□□□ -1.5
CXCL12P48061 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC5.7□□□□□ -1.5
CXCL12P48061 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CXCL12P48061 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC5.7□□□□□ -1.5
CXCL12P48061 RNA5SP228-201ENST00000516232 133 ntBASIC5.7□□□□□ -1.5
CXCL12P48061 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC5.7□□□□□ -1.5
CXCL12P48061 AC090592.1-202ENST00000533049 568 ntTSL 4 BASIC5.7□□□□□ -1.5
CXCL12P48061 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC5.7□□□□□ -1.5
CXCL12P48061 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC5.7□□□□□ -1.5
CXCL12P48061 AC000068.2-201ENST00000608816 460 ntBASIC5.7□□□□□ -1.5
CXCL12P48061 AC100827.5-201ENST00000615883 426 ntBASIC5.7□□□□□ -1.5
CXCL12P48061 WWOX-217ENST00000620008 450 ntTSL 2 BASIC5.7□□□□□ -1.5
CXCL12P48061 AP002505.2-201ENST00000623585 696 ntBASIC5.7□□□□□ -1.5
CXCL12P48061 AC005618.1-201ENST00000606901 3148 ntBASIC5.7□□□□□ -1.5
CXCL12P48061 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CXCL12P48061 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC5.7□□□□□ -1.5
CXCL12P48061 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CXCL12P48061 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC5.7□□□□□ -1.5
CXCL12P48061 LARP1B-201ENST00000326639 4891 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
CXCL12P48061 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
CXCL12P48061 TINAG-201ENST00000259782 1754 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CXCL12P48061 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC5.7□□□□□ -1.5
CXCL12P48061 NBPF14-209ENST00000620240 2656 ntTSL 5 BASIC5.7□□□□□ -1.5
CXCL12P48061 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC5.7□□□□□ -1.5
CXCL12P48061 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
CXCL12P48061 DNM1P47-203ENST00000571780 12667 ntBASIC5.7□□□□□ -1.5
CXCL12P48061 SLC35F1-202ENST00000621341 4481 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
CXCL12P48061 FOXM1-202ENST00000359843 3315 ntAPPRIS P4 TSL 1 (best) BASIC5.69□□□□□ -1.5
CXCL12P48061 ZNF138-204ENST00000437743 2574 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
CXCL12P48061 LINC01616-201ENST00000561816 2280 ntBASIC5.69□□□□□ -1.5
CXCL12P48061 KIF14-202ENST00000614960 6838 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CXCL12P48061 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
CXCL12P48061 MAGEB16-204ENST00000399989 1818 ntAPPRIS P2 TSL 5 BASIC5.69□□□□□ -1.5
CXCL12P48061 AC110373.1-201ENST00000505994 3505 ntBASIC5.69□□□□□ -1.5
CXCL12P48061 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CXCL12P48061 SORBS1-202ENST00000306402 5858 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
CXCL12P48061 AC112255.1-201ENST00000624070 2493 ntBASIC5.69□□□□□ -1.5
CXCL12P48061 CCDC125-201ENST00000383374 2006 ntTSL 5 BASIC5.69□□□□□ -1.5
CXCL12P48061 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC5.69□□□□□ -1.5
CXCL12P48061 OLMALINC-203ENST00000641087 3779 ntBASIC5.69□□□□□ -1.5
CXCL12P48061 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CXCL12P48061 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
CXCL12P48061 AC022905.1-201ENST00000503430 3048 ntBASIC5.69□□□□□ -1.5
CXCL12P48061 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CXCL12P48061 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
CXCL12P48061 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
CXCL12P48061 AC006466.1-201ENST00000438721 289 ntBASIC5.69□□□□□ -1.5
CXCL12P48061 AC073581.1-201ENST00000519036 575 ntBASIC5.69□□□□□ -1.5
CXCL12P48061 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC5.69□□□□□ -1.5
CXCL12P48061 AC126615.2-201ENST00000553003 515 ntBASIC5.69□□□□□ -1.5
CXCL12P48061 MIR4436B2-201ENST00000581415 91 ntBASIC5.69□□□□□ -1.5
CXCL12P48061 MIR4436B1-201ENST00000583272 91 ntBASIC5.69□□□□□ -1.5
CXCL12P48061 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC5.69□□□□□ -1.5
CXCL12P48061 CDC42EP3P1-201ENST00000601004 764 ntBASIC5.69□□□□□ -1.5
CXCL12P48061 AC091193.1-201ENST00000604640 448 ntBASIC5.69□□□□□ -1.5
CXCL12P48061 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC5.69□□□□□ -1.5
CXCL12P48061 AL450226.2-201ENST00000622913 439 ntBASIC5.69□□□□□ -1.5
CXCL12P48061 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC5.69□□□□□ -1.5
CXCL12P48061 PYHIN1-203ENST00000368140 2083 ntAPPRIS P4 TSL 1 (best) BASIC5.69□□□□□ -1.5
CXCL12P48061 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
CXCL12P48061 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC5.69□□□□□ -1.5
CXCL12P48061 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC5.69□□□□□ -1.5
CXCL12P48061 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC5.69□□□□□ -1.5
CXCL12P48061 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CXCL12P48061 TTC8-217ENST00000622513 5270 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CXCL12P48061 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
CXCL12P48061 NREP-206ENST00000447165 2304 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CXCL12P48061 MAPK10-270ENST00000641102 3538 ntBASIC5.69□□□□□ -1.5
CXCL12P48061 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CXCL12P48061 TMEM167B-201ENST00000338272 3730 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CXCL12P48061 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC5.68□□□□□ -1.5
CXCL12P48061 MFSD4BP1-201ENST00000513330 1552 ntBASIC5.68□□□□□ -1.5
CXCL12P48061 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC5.68□□□□□ -1.5
CXCL12P48061 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CXCL12P48061 GIGYF2-246ENST00000629305 7878 ntTSL 5 BASIC5.68□□□□□ -1.5
CXCL12P48061 AC113146.2-201ENST00000560743 1961 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CXCL12P48061 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC5.68□□□□□ -1.5
CXCL12P48061 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CXCL12P48061 RNA5SP335-201ENST00000363817 110 ntBASIC5.68□□□□□ -1.5
CXCL12P48061 SNORD8-201ENST00000363915 110 ntBASIC5.68□□□□□ -1.5
CXCL12P48061 MIR551A-201ENST00000385042 96 ntBASIC5.68□□□□□ -1.5
CXCL12P48061 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC5.68□□□□□ -1.5
CXCL12P48061 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC5.68□□□□□ -1.5
CXCL12P48061 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC5.68□□□□□ -1.5
CXCL12P48061 AC009784.1-201ENST00000426484 460 ntBASIC5.68□□□□□ -1.5
CXCL12P48061 AC006335.2-201ENST00000437993 330 ntBASIC5.68□□□□□ -1.5
CXCL12P48061 ELOCP3-201ENST00000439303 348 ntBASIC5.68□□□□□ -1.5
CXCL12P48061 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC5.68□□□□□ -1.5
CXCL12P48061 EIF4EBP2P1-201ENST00000450009 343 ntBASIC5.68□□□□□ -1.5
CXCL12P48061 RPS23P2-201ENST00000463671 415 ntBASIC5.68□□□□□ -1.5
CXCL12P48061 AC110716.1-201ENST00000506934 607 ntTSL 2 BASIC5.68□□□□□ -1.5
CXCL12P48061 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC5.68□□□□□ -1.5
CXCL12P48061 AC078878.1-201ENST00000539832 958 ntBASIC5.68□□□□□ -1.5
CXCL12P48061 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC5.68□□□□□ -1.5
CXCL12P48061 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC5.68□□□□□ -1.5
CXCL12P48061 AL118522.2-201ENST00000616045 615 ntBASIC5.68□□□□□ -1.5
CXCL12P48061 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC5.68□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 91.1 ms