Protein–RNA interactions for Protein: P43378

PTPN9, Tyrosine-protein phosphatase non-receptor type 9, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9P43378 OR7E10P-201ENST00000526420 991 ntBASIC6.13□□□□□ -1.43
PTPN9P43378 AC027369.2-201ENST00000528030 440 ntBASIC6.13□□□□□ -1.43
PTPN9P43378 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC6.13□□□□□ -1.43
PTPN9P43378 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC6.13□□□□□ -1.43
PTPN9P43378 OTX2-203ENST00000554559 715 ntTSL 5 BASIC6.13□□□□□ -1.43
PTPN9P43378 HMGN2P47-201ENST00000559378 272 ntBASIC6.13□□□□□ -1.43
PTPN9P43378 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
PTPN9P43378 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC6.13□□□□□ -1.43
PTPN9P43378 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC6.13□□□□□ -1.43
PTPN9P43378 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC6.13□□□□□ -1.43
PTPN9P43378 AP001267.4-201ENST00000602598 545 ntBASIC6.13□□□□□ -1.43
PTPN9P43378 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
PTPN9P43378 AL356490.1-201ENST00000623079 479 ntBASIC6.13□□□□□ -1.43
PTPN9P43378 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC6.13□□□□□ -1.43
PTPN9P43378 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC6.13□□□□□ -1.43
PTPN9P43378 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC6.13□□□□□ -1.43
PTPN9P43378 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC6.13□□□□□ -1.43
PTPN9P43378 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
PTPN9P43378 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC6.13□□□□□ -1.43
PTPN9P43378 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
PTPN9P43378 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC6.13□□□□□ -1.43
PTPN9P43378 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
PTPN9P43378 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
PTPN9P43378 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC6.13□□□□□ -1.43
PTPN9P43378 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC6.12□□□□□ -1.43
PTPN9P43378 PARP4P2-201ENST00000446672 3326 ntBASIC6.12□□□□□ -1.43
PTPN9P43378 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC6.12□□□□□ -1.43
PTPN9P43378 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
PTPN9P43378 FBXL21-201ENST00000297158 1305 ntBASIC6.12□□□□□ -1.43
PTPN9P43378 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
PTPN9P43378 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC6.12□□□□□ -1.43
PTPN9P43378 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
PTPN9P43378 RNA5SP477-201ENST00000362639 119 ntBASIC6.12□□□□□ -1.43
PTPN9P43378 RN7SKP275-201ENST00000364626 301 ntBASIC6.12□□□□□ -1.43
PTPN9P43378 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC6.12□□□□□ -1.43
PTPN9P43378 AC004386.1-201ENST00000393214 761 ntBASIC6.12□□□□□ -1.43
PTPN9P43378 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
PTPN9P43378 OR1F12-201ENST00000402365 945 ntBASIC6.12□□□□□ -1.43
PTPN9P43378 CYP2AC1P-201ENST00000407830 1173 ntBASIC6.12□□□□□ -1.43
PTPN9P43378 AC096644.3-201ENST00000416788 338 ntBASIC6.12□□□□□ -1.43
PTPN9P43378 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC6.12□□□□□ -1.43
PTPN9P43378 RPS6P14-201ENST00000425165 719 ntBASIC6.12□□□□□ -1.43
PTPN9P43378 AC017019.1-201ENST00000426129 261 ntBASIC6.12□□□□□ -1.43
PTPN9P43378 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC6.12□□□□□ -1.43
PTPN9P43378 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC6.12□□□□□ -1.43
PTPN9P43378 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC6.12□□□□□ -1.43
PTPN9P43378 AC015983.1-201ENST00000441577 373 ntBASIC6.12□□□□□ -1.43
PTPN9P43378 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC6.12□□□□□ -1.43
PTPN9P43378 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC6.12□□□□□ -1.43
PTPN9P43378 FRG2FP-204ENST00000453982 852 ntBASIC6.12□□□□□ -1.43
PTPN9P43378 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC6.12□□□□□ -1.43
PTPN9P43378 AC006539.1-201ENST00000481419 501 ntBASIC6.12□□□□□ -1.43
PTPN9P43378 SNORA26.10-201ENST00000516427 141 ntBASIC6.12□□□□□ -1.43
PTPN9P43378 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC6.12□□□□□ -1.43
PTPN9P43378 AC246817.1-201ENST00000520024 610 ntTSL 3 BASIC6.12□□□□□ -1.43
PTPN9P43378 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC6.12□□□□□ -1.43
PTPN9P43378 NSMCE2-210ENST00000522563 1037 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
PTPN9P43378 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC6.12□□□□□ -1.43
PTPN9P43378 ALG9-IT1-201ENST00000531305 684 ntTSL 3 BASIC6.12□□□□□ -1.43
PTPN9P43378 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
PTPN9P43378 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC6.12□□□□□ -1.43
PTPN9P43378 AL356801.1-201ENST00000559320 294 ntBASIC6.12□□□□□ -1.43
PTPN9P43378 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC6.12□□□□□ -1.43
PTPN9P43378 AC018690.1-201ENST00000608144 626 ntBASIC6.12□□□□□ -1.43
PTPN9P43378 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC6.12□□□□□ -1.43
PTPN9P43378 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC6.12□□□□□ -1.43
PTPN9P43378 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC6.12□□□□□ -1.43
PTPN9P43378 ATM-229ENST00000639953 587 ntTSL 5 BASIC6.12□□□□□ -1.43
PTPN9P43378 OR11H2-202ENST00000641517 1085 ntBASIC6.12□□□□□ -1.43
PTPN9P43378 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC6.12□□□□□ -1.43
PTPN9P43378 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC6.12□□□□□ -1.43
PTPN9P43378 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
PTPN9P43378 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
PTPN9P43378 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC6.11□□□□□ -1.43
PTPN9P43378 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
PTPN9P43378 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
PTPN9P43378 DCN-218ENST00000551354 2924 ntTSL 3 BASIC6.11□□□□□ -1.43
PTPN9P43378 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC6.11□□□□□ -1.43
PTPN9P43378 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
PTPN9P43378 AL929601.4-201ENST00000613011 1341 ntBASIC6.11□□□□□ -1.43
PTPN9P43378 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
PTPN9P43378 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
PTPN9P43378 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.11□□□□□ -1.43
PTPN9P43378 AC107977.1-201ENST00000355745 939 ntBASIC6.11□□□□□ -1.43
PTPN9P43378 RNA5SP433-201ENST00000364491 114 ntBASIC6.11□□□□□ -1.43
PTPN9P43378 RN7SKP78-201ENST00000364711 318 ntBASIC6.11□□□□□ -1.43
PTPN9P43378 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.11□□□□□ -1.43
PTPN9P43378 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.11□□□□□ -1.43
PTPN9P43378 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
PTPN9P43378 DNAJA1P3-201ENST00000399417 1194 ntBASIC6.11□□□□□ -1.43
PTPN9P43378 AL589994.1-201ENST00000404962 340 ntBASIC6.11□□□□□ -1.43
PTPN9P43378 RPL24P2-201ENST00000421023 475 ntBASIC6.11□□□□□ -1.43
PTPN9P43378 AL356476.1-201ENST00000421481 480 ntTSL 5 BASIC6.11□□□□□ -1.43
PTPN9P43378 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC6.11□□□□□ -1.43
PTPN9P43378 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC6.11□□□□□ -1.43
PTPN9P43378 FAR1P1-201ENST00000427163 934 ntBASIC6.11□□□□□ -1.43
PTPN9P43378 AC110602.1-201ENST00000437414 318 ntBASIC6.11□□□□□ -1.43
PTPN9P43378 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC6.11□□□□□ -1.43
PTPN9P43378 ZNF736P1Y-201ENST00000440402 1276 ntBASIC6.11□□□□□ -1.43
PTPN9P43378 AC023141.8-201ENST00000442554 208 ntBASIC6.11□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 88.1 ms