Protein–RNA interactions for Protein: P35221

CTNNA1, Catenin alpha-1, humanhuman

Known RBP Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1P35221 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
CTNNA1P35221 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC6.14□□□□□ -1.43
CTNNA1P35221 AC011933.2-201ENST00000578539 2790 ntBASIC6.14□□□□□ -1.43
CTNNA1P35221 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
CTNNA1P35221 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC6.14□□□□□ -1.43
CTNNA1P35221 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
CTNNA1P35221 RNA5SP91-201ENST00000390902 119 ntBASIC6.14□□□□□ -1.43
CTNNA1P35221 AC087752.1-201ENST00000391360 558 ntBASIC6.14□□□□□ -1.43
CTNNA1P35221 RNU2-18P-201ENST00000411224 162 ntBASIC6.14□□□□□ -1.43
CTNNA1P35221 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC6.14□□□□□ -1.43
CTNNA1P35221 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC6.14□□□□□ -1.43
CTNNA1P35221 KIF4CP-201ENST00000422742 1279 ntBASIC6.14□□□□□ -1.43
CTNNA1P35221 VTI1BP4-201ENST00000427516 527 ntBASIC6.14□□□□□ -1.43
CTNNA1P35221 RPS27AP6-201ENST00000427962 448 ntBASIC6.14□□□□□ -1.43
CTNNA1P35221 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC6.14□□□□□ -1.43
CTNNA1P35221 AC015983.1-201ENST00000441577 373 ntBASIC6.14□□□□□ -1.43
CTNNA1P35221 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC6.14□□□□□ -1.43
CTNNA1P35221 RN7SL269P-201ENST00000467795 305 ntBASIC6.14□□□□□ -1.43
CTNNA1P35221 AC104779.1-201ENST00000503557 441 ntTSL 3 BASIC6.14□□□□□ -1.43
CTNNA1P35221 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC6.14□□□□□ -1.43
CTNNA1P35221 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC6.14□□□□□ -1.43
CTNNA1P35221 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC6.14□□□□□ -1.43
CTNNA1P35221 GARSP1-201ENST00000570895 719 ntBASIC6.14□□□□□ -1.43
CTNNA1P35221 LINC00907-202ENST00000585639 915 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
CTNNA1P35221 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC6.14□□□□□ -1.43
CTNNA1P35221 AC073575.2-201ENST00000614212 627 ntBASIC6.14□□□□□ -1.43
CTNNA1P35221 MIR6774-201ENST00000614651 70 ntBASIC6.14□□□□□ -1.43
CTNNA1P35221 Metazoa_SRP.81-201ENST00000618466 316 ntBASIC6.14□□□□□ -1.43
CTNNA1P35221 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC6.14□□□□□ -1.43
CTNNA1P35221 AC005618.4-201ENST00000625053 554 ntBASIC6.14□□□□□ -1.43
CTNNA1P35221 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC6.14□□□□□ -1.43
CTNNA1P35221 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC6.14□□□□□ -1.43
CTNNA1P35221 AL357140.4-201ENST00000636827 412 ntBASIC6.14□□□□□ -1.43
CTNNA1P35221 AC007603.3-201ENST00000636915 979 ntBASIC6.14□□□□□ -1.43
CTNNA1P35221 5S_rRNA.29-201ENST00000641250 107 ntBASIC6.14□□□□□ -1.43
CTNNA1P35221 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC6.14□□□□□ -1.43
CTNNA1P35221 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC6.14□□□□□ -1.43
CTNNA1P35221 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
CTNNA1P35221 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
CTNNA1P35221 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC6.14□□□□□ -1.43
CTNNA1P35221 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
CTNNA1P35221 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC6.14□□□□□ -1.43
CTNNA1P35221 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC6.13□□□□□ -1.43
CTNNA1P35221 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
CTNNA1P35221 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
CTNNA1P35221 SELENOWP1-201ENST00000322792 252 ntBASIC6.13□□□□□ -1.43
CTNNA1P35221 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
CTNNA1P35221 GNAT3-201ENST00000398291 1159 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
CTNNA1P35221 YWHAZP6-201ENST00000399764 738 ntBASIC6.13□□□□□ -1.43
CTNNA1P35221 GLS-203ENST00000409215 632 ntTSL 4 BASIC6.13□□□□□ -1.43
CTNNA1P35221 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC6.13□□□□□ -1.43
CTNNA1P35221 ARAFP1-201ENST00000422172 605 ntBASIC6.13□□□□□ -1.43
CTNNA1P35221 HMGB3P10-201ENST00000434734 572 ntBASIC6.13□□□□□ -1.43
CTNNA1P35221 BMS1P10-201ENST00000443754 1120 ntBASIC6.13□□□□□ -1.43
CTNNA1P35221 LINC00867-203ENST00000445161 580 ntTSL 2 BASIC6.13□□□□□ -1.43
CTNNA1P35221 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC6.13□□□□□ -1.43
CTNNA1P35221 AL157777.1-201ENST00000468100 304 ntBASIC6.13□□□□□ -1.43
CTNNA1P35221 AC105918.1-201ENST00000474399 838 ntBASIC6.13□□□□□ -1.43
CTNNA1P35221 AC022336.1-201ENST00000475510 337 ntBASIC6.13□□□□□ -1.43
CTNNA1P35221 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
CTNNA1P35221 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC6.13□□□□□ -1.43
CTNNA1P35221 LINC02278-201ENST00000512170 500 ntTSL 5 BASIC6.13□□□□□ -1.43
CTNNA1P35221 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC6.13□□□□□ -1.43
CTNNA1P35221 AP001000.1-201ENST00000526843 742 ntBASIC6.13□□□□□ -1.43
CTNNA1P35221 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
CTNNA1P35221 AC084824.2-201ENST00000548906 345 ntBASIC6.13□□□□□ -1.43
CTNNA1P35221 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC6.13□□□□□ -1.43
CTNNA1P35221 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC6.13□□□□□ -1.43
CTNNA1P35221 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC6.13□□□□□ -1.43
CTNNA1P35221 AC007346.1-201ENST00000569208 867 ntBASIC6.13□□□□□ -1.43
CTNNA1P35221 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC6.13□□□□□ -1.43
CTNNA1P35221 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
CTNNA1P35221 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC6.13□□□□□ -1.43
CTNNA1P35221 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC6.13□□□□□ -1.43
CTNNA1P35221 C5orf63-208ENST00000607731 478 ntTSL 5 BASIC6.13□□□□□ -1.43
CTNNA1P35221 AL021918.2-201ENST00000613415 194 ntBASIC6.13□□□□□ -1.43
CTNNA1P35221 FAM27E2-201ENST00000619668 403 ntBASIC6.13□□□□□ -1.43
CTNNA1P35221 LINC02536-201ENST00000625799 625 ntTSL 3 BASIC6.13□□□□□ -1.43
CTNNA1P35221 SMG1P7-201ENST00000565246 2704 ntBASIC6.13□□□□□ -1.43
CTNNA1P35221 AC008627.1-201ENST00000517511 1704 ntBASIC6.13□□□□□ -1.43
CTNNA1P35221 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC6.13□□□□□ -1.43
CTNNA1P35221 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
CTNNA1P35221 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
CTNNA1P35221 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
CTNNA1P35221 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
CTNNA1P35221 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC6.13□□□□□ -1.43
CTNNA1P35221 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
CTNNA1P35221 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
CTNNA1P35221 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
CTNNA1P35221 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
CTNNA1P35221 PAGE2B-201ENST00000374971 493 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
CTNNA1P35221 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
CTNNA1P35221 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC6.12□□□□□ -1.43
CTNNA1P35221 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC6.12□□□□□ -1.43
CTNNA1P35221 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC6.12□□□□□ -1.43
CTNNA1P35221 SETP10-201ENST00000424368 814 ntBASIC6.12□□□□□ -1.43
CTNNA1P35221 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC6.12□□□□□ -1.43
CTNNA1P35221 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
CTNNA1P35221 AL353662.1-201ENST00000439099 327 ntBASIC6.12□□□□□ -1.43
CTNNA1P35221 CYCSP51-201ENST00000443545 318 ntBASIC6.12□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 86.5 ms