Protein–RNA interactions for Protein: P18858

LIG1, DNA ligase 1, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1P18858 AL392088.2-201ENST00000637607 285 ntBASIC7.66□□□□□ -1.18
LIG1P18858 MIR1322-201ENST00000638013 71 ntBASIC7.66□□□□□ -1.18
LIG1P18858 PHC3-203ENST00000467570 2595 ntTSL 2 BASIC7.66□□□□□ -1.18
LIG1P18858 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
LIG1P18858 IL1RL1-202ENST00000311734 3994 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
LIG1P18858 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC7.66□□□□□ -1.18
LIG1P18858 LINC00517-202ENST00000554257 3460 ntTSL 2 BASIC7.66□□□□□ -1.18
LIG1P18858 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC7.66□□□□□ -1.18
LIG1P18858 AL139384.2-201ENST00000613809 3590 ntBASIC7.66□□□□□ -1.18
LIG1P18858 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC7.66□□□□□ -1.18
LIG1P18858 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
LIG1P18858 AC105749.1-201ENST00000631338 2008 ntBASIC7.66□□□□□ -1.18
LIG1P18858 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC7.66□□□□□ -1.18
LIG1P18858 AC027279.4-201ENST00000624371 2072 ntBASIC7.66□□□□□ -1.18
LIG1P18858 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
LIG1P18858 STMN2-201ENST00000220876 2223 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
LIG1P18858 Z98257.1-202ENST00000431027 2493 ntTSL 5 BASIC7.66□□□□□ -1.18
LIG1P18858 STIL-203ENST00000371877 5009 ntAPPRIS ALT2 TSL 1 (best) BASIC7.66□□□□□ -1.18
LIG1P18858 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC7.65□□□□□ -1.18
LIG1P18858 ERCC6L-202ENST00000373657 4344 ntAPPRIS ALT2 TSL 2 BASIC7.65□□□□□ -1.18
LIG1P18858 CPEB4-202ENST00000334035 6705 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
LIG1P18858 REG1A-201ENST00000233735 808 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
LIG1P18858 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC7.65□□□□□ -1.18
LIG1P18858 RNU4-92P-201ENST00000363783 136 ntBASIC7.65□□□□□ -1.18
LIG1P18858 DLEU2L-201ENST00000371086 3555 ntBASIC7.65□□□□□ -1.18
LIG1P18858 FABP3-201ENST00000373713 725 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
LIG1P18858 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC7.65□□□□□ -1.18
LIG1P18858 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC7.65□□□□□ -1.18
LIG1P18858 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
LIG1P18858 NUDT19P3-201ENST00000404698 555 ntBASIC7.65□□□□□ -1.18
LIG1P18858 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC7.65□□□□□ -1.18
LIG1P18858 TATDN1P1-201ENST00000414123 891 ntBASIC7.65□□□□□ -1.18
LIG1P18858 RAD23BP2-201ENST00000416003 1207 ntBASIC7.65□□□□□ -1.18
LIG1P18858 AC096644.3-201ENST00000416788 338 ntBASIC7.65□□□□□ -1.18
LIG1P18858 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC7.65□□□□□ -1.18
LIG1P18858 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC7.65□□□□□ -1.18
LIG1P18858 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC7.65□□□□□ -1.18
LIG1P18858 AL672212.1-201ENST00000422246 400 ntBASIC7.65□□□□□ -1.18
LIG1P18858 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
LIG1P18858 OR5BE1P-201ENST00000425977 939 ntBASIC7.65□□□□□ -1.18
LIG1P18858 GTF2IP3-201ENST00000433887 494 ntBASIC7.65□□□□□ -1.18
LIG1P18858 MTCYBP39-201ENST00000437562 491 ntBASIC7.65□□□□□ -1.18
LIG1P18858 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC7.65□□□□□ -1.18
LIG1P18858 LMCD1-AS1-202ENST00000439407 576 ntTSL 4 BASIC7.65□□□□□ -1.18
LIG1P18858 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
LIG1P18858 RPL23AP28-201ENST00000448062 470 ntBASIC7.65□□□□□ -1.18
LIG1P18858 GOT2P2-201ENST00000450663 1251 ntBASIC7.65□□□□□ -1.18
LIG1P18858 AC007099.1-201ENST00000451622 1185 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
LIG1P18858 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC7.65□□□□□ -1.18
LIG1P18858 ANKRD26P4-201ENST00000455755 950 ntBASIC7.65□□□□□ -1.18
LIG1P18858 AL096803.1-201ENST00000456921 1021 ntBASIC7.65□□□□□ -1.18
LIG1P18858 AC016822.1-201ENST00000457975 439 ntTSL 3 BASIC7.65□□□□□ -1.18
LIG1P18858 PPP1R2P6-201ENST00000478565 588 ntBASIC7.65□□□□□ -1.18
LIG1P18858 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
LIG1P18858 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC7.65□□□□□ -1.18
LIG1P18858 RN7SKP5-201ENST00000517045 272 ntBASIC7.65□□□□□ -1.18
LIG1P18858 RNU6-1028P-201ENST00000517164 93 ntBASIC7.65□□□□□ -1.18
LIG1P18858 SLC25A30-204ENST00000519676 3670 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
LIG1P18858 IGHVIII-11-1-201ENST00000522733 267 ntBASIC7.65□□□□□ -1.18
LIG1P18858 ZDHHC20P3-201ENST00000531576 336 ntBASIC7.65□□□□□ -1.18
LIG1P18858 AP000916.1-201ENST00000533869 835 ntBASIC7.65□□□□□ -1.18
LIG1P18858 DDX18P5-201ENST00000534547 1306 ntBASIC7.65□□□□□ -1.18
LIG1P18858 AC008015.1-201ENST00000555505 465 ntBASIC7.65□□□□□ -1.18
LIG1P18858 PPIAP6-201ENST00000557078 499 ntBASIC7.65□□□□□ -1.18
LIG1P18858 HMGN1P26-201ENST00000558737 303 ntBASIC7.65□□□□□ -1.18
LIG1P18858 MIR4312-201ENST00000579909 76 ntBASIC7.65□□□□□ -1.18
LIG1P18858 AC069366.1-201ENST00000583159 838 ntBASIC7.65□□□□□ -1.18
LIG1P18858 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC7.65□□□□□ -1.18
LIG1P18858 AC005546.1-201ENST00000591837 391 ntTSL 3 BASIC7.65□□□□□ -1.18
LIG1P18858 AC097467.3-210ENST00000597939 705 ntTSL 5 BASIC7.65□□□□□ -1.18
LIG1P18858 AC104446.1-201ENST00000613728 1321 ntBASIC7.65□□□□□ -1.18
LIG1P18858 AK6-205ENST00000618980 483 ntTSL 2 BASIC7.65□□□□□ -1.18
LIG1P18858 AC022079.2-201ENST00000619739 566 ntBASIC7.65□□□□□ -1.18
LIG1P18858 DAPL1-204ENST00000621326 671 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
LIG1P18858 AC067852.7-201ENST00000623270 535 ntBASIC7.65□□□□□ -1.18
LIG1P18858 AL603839.4-201ENST00000624658 1005 ntBASIC7.65□□□□□ -1.18
LIG1P18858 AC005858.3-201ENST00000624756 589 ntBASIC7.65□□□□□ -1.18
LIG1P18858 LINC00836-201ENST00000625325 582 ntTSL 4 BASIC7.65□□□□□ -1.18
LIG1P18858 SYT14-207ENST00000629778 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC7.65□□□□□ -1.18
LIG1P18858 MAGI2-235ENST00000637282 3174 ntTSL 5 BASIC7.65□□□□□ -1.18
LIG1P18858 OR5BE1P-202ENST00000641168 1176 ntBASIC7.65□□□□□ -1.18
LIG1P18858 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.19
LIG1P18858 NSF-206ENST00000575068 2667 ntTSL 2 BASIC7.65□□□□□ -1.19
LIG1P18858 LGALS17A-201ENST00000412609 2562 ntTSL 2 BASIC7.65□□□□□ -1.19
LIG1P18858 NOSTRIN-209ENST00000458381 2535 ntTSL 2 BASIC7.64□□□□□ -1.19
LIG1P18858 MLLT10-217ENST00000631589 4955 ntAPPRIS ALT2 TSL 5 BASIC7.64□□□□□ -1.19
LIG1P18858 ZNF131-201ENST00000306938 2400 ntAPPRIS P1 TSL 2 BASIC7.64□□□□□ -1.19
LIG1P18858 IFIT1-202ENST00000546318 4613 ntTSL 3 BASIC7.64□□□□□ -1.19
LIG1P18858 GBA3-206ENST00000610628 2154 ntAPPRIS ALT2 TSL 5 BASIC7.64□□□□□ -1.19
LIG1P18858 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC7.64□□□□□ -1.19
LIG1P18858 MTCO1P25-201ENST00000414449 1799 ntBASIC7.64□□□□□ -1.19
LIG1P18858 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC7.64□□□□□ -1.19
LIG1P18858 CTXN3-201ENST00000379445 1660 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
LIG1P18858 YES1P1-201ENST00000418510 1628 ntBASIC7.64□□□□□ -1.19
LIG1P18858 IPO8-209ENST00000544829 3212 ntTSL 2 BASIC7.64□□□□□ -1.19
LIG1P18858 ZNF229-203ENST00000613197 4835 ntAPPRIS ALT2 TSL 1 (best) BASIC7.64□□□□□ -1.19
LIG1P18858 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC7.64□□□□□ -1.19
LIG1P18858 TRIM75P-201ENST00000503032 1407 ntAPPRIS P1 BASIC7.64□□□□□ -1.19
LIG1P18858 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC7.64□□□□□ -1.19
LIG1P18858 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC7.64□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 92.1 ms