Protein–RNA interactions for Protein: P16410

CTLA4, Cytotoxic T-lymphocyte protein 4, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTLA4P16410 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC4.98□□□□□ -1.61
CTLA4P16410 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
CTLA4P16410 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
CTLA4P16410 AC099535.1-201ENST00000408928 371 ntBASIC4.98□□□□□ -1.61
CTLA4P16410 LINC00396-201ENST00000411690 439 ntTSL 3 BASIC4.98□□□□□ -1.61
CTLA4P16410 AC245060.4-201ENST00000413293 1121 ntBASIC4.98□□□□□ -1.61
CTLA4P16410 LINC01291-202ENST00000418204 441 ntTSL 5 BASIC4.98□□□□□ -1.61
CTLA4P16410 TRGV5P-201ENST00000419915 354 ntBASIC4.98□□□□□ -1.61
CTLA4P16410 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC4.98□□□□□ -1.61
CTLA4P16410 HMGB3P24-201ENST00000433260 622 ntBASIC4.98□□□□□ -1.61
CTLA4P16410 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC4.98□□□□□ -1.61
CTLA4P16410 MRE11P1-201ENST00000464884 2127 ntBASIC4.98□□□□□ -1.61
CTLA4P16410 RN7SL741P-201ENST00000482473 289 ntBASIC4.98□□□□□ -1.61
CTLA4P16410 RPS3AP15-201ENST00000483874 781 ntBASIC4.98□□□□□ -1.61
CTLA4P16410 CBX1-205ENST00000495350 550 ntTSL 2 BASIC4.98□□□□□ -1.61
CTLA4P16410 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC4.98□□□□□ -1.61
CTLA4P16410 AC097486.1-201ENST00000515331 210 ntBASIC4.98□□□□□ -1.61
CTLA4P16410 OR4A17P-201ENST00000526032 904 ntBASIC4.98□□□□□ -1.61
CTLA4P16410 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC4.98□□□□□ -1.61
CTLA4P16410 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC4.98□□□□□ -1.61
CTLA4P16410 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC4.98□□□□□ -1.61
CTLA4P16410 MIR4271-201ENST00000582451 67 ntBASIC4.98□□□□□ -1.61
CTLA4P16410 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC4.98□□□□□ -1.61
CTLA4P16410 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC4.98□□□□□ -1.61
CTLA4P16410 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC4.98□□□□□ -1.61
CTLA4P16410 AC007786.3-201ENST00000615154 596 ntBASIC4.98□□□□□ -1.61
CTLA4P16410 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC4.98□□□□□ -1.61
CTLA4P16410 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC4.98□□□□□ -1.61
CTLA4P16410 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CTLA4P16410 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CTLA4P16410 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC4.98□□□□□ -1.61
CTLA4P16410 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CTLA4P16410 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
CTLA4P16410 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
CTLA4P16410 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC4.98□□□□□ -1.61
CTLA4P16410 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CTLA4P16410 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CTLA4P16410 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC4.98□□□□□ -1.61
CTLA4P16410 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
CTLA4P16410 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC4.98□□□□□ -1.61
CTLA4P16410 AC006206.1-201ENST00000544842 3387 ntBASIC4.98□□□□□ -1.61
CTLA4P16410 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
CTLA4P16410 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC4.97□□□□□ -1.61
CTLA4P16410 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CTLA4P16410 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CTLA4P16410 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC4.97□□□□□ -1.61
CTLA4P16410 AL078595.2-201ENST00000605309 1780 ntBASIC4.97□□□□□ -1.61
CTLA4P16410 ALB-202ENST00000401494 1659 ntTSL 5 BASIC4.97□□□□□ -1.61
CTLA4P16410 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
CTLA4P16410 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC4.97□□□□□ -1.61
CTLA4P16410 SNORA70.6-201ENST00000383934 134 ntBASIC4.97□□□□□ -1.61
CTLA4P16410 U3.28-201ENST00000391249 210 ntBASIC4.97□□□□□ -1.61
CTLA4P16410 OR7E156P-201ENST00000400303 464 ntBASIC4.97□□□□□ -1.61
CTLA4P16410 AL133482.1-201ENST00000415988 498 ntBASIC4.97□□□□□ -1.61
CTLA4P16410 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC4.97□□□□□ -1.61
CTLA4P16410 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC4.97□□□□□ -1.61
CTLA4P16410 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC4.97□□□□□ -1.61
CTLA4P16410 AC008063.2-201ENST00000432251 619 ntTSL 2 BASIC4.97□□□□□ -1.61
CTLA4P16410 AC006335.2-201ENST00000437993 330 ntBASIC4.97□□□□□ -1.61
CTLA4P16410 AL596266.1-201ENST00000448132 400 ntBASIC4.97□□□□□ -1.61
CTLA4P16410 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC4.97□□□□□ -1.61
CTLA4P16410 CSNK1A1P3-201ENST00000504105 330 ntBASIC4.97□□□□□ -1.61
CTLA4P16410 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC4.97□□□□□ -1.61
CTLA4P16410 AC006499.4-201ENST00000510947 694 ntBASIC4.97□□□□□ -1.61
CTLA4P16410 PDE4D-225ENST00000515835 590 ntTSL 4 BASIC4.97□□□□□ -1.61
CTLA4P16410 SNORA70.20-201ENST00000516848 126 ntBASIC4.97□□□□□ -1.61
CTLA4P16410 AC246817.1-201ENST00000520024 610 ntTSL 3 BASIC4.97□□□□□ -1.61
CTLA4P16410 HMGB1P42-201ENST00000532126 553 ntBASIC4.97□□□□□ -1.61
CTLA4P16410 OR5AM1P-201ENST00000532136 1032 ntBASIC4.97□□□□□ -1.61
CTLA4P16410 AC107958.1-201ENST00000556576 290 ntBASIC4.97□□□□□ -1.61
CTLA4P16410 AC114488.3-201ENST00000581333 480 ntTSL 4 BASIC4.97□□□□□ -1.61
CTLA4P16410 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC4.97□□□□□ -1.61
CTLA4P16410 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC4.97□□□□□ -1.61
CTLA4P16410 AL031658.2-201ENST00000616850 651 ntBASIC4.97□□□□□ -1.61
CTLA4P16410 RN7SL544P-201ENST00000617232 284 ntBASIC4.97□□□□□ -1.61
CTLA4P16410 RN7SL763P-201ENST00000620922 284 ntBASIC4.97□□□□□ -1.61
CTLA4P16410 AC087565.3-203ENST00000641018 837 ntBASIC4.97□□□□□ -1.61
CTLA4P16410 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CTLA4P16410 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CTLA4P16410 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CTLA4P16410 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC4.97□□□□□ -1.61
CTLA4P16410 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CTLA4P16410 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
CTLA4P16410 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
CTLA4P16410 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC4.97□□□□□ -1.61
CTLA4P16410 NCOA4P2-201ENST00000340589 1813 ntBASIC4.97□□□□□ -1.61
CTLA4P16410 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
CTLA4P16410 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CTLA4P16410 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CTLA4P16410 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CTLA4P16410 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC4.97□□□□□ -1.61
CTLA4P16410 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
CTLA4P16410 SAMD3-205ENST00000457563 1877 ntTSL 2 BASIC4.96□□□□□ -1.61
CTLA4P16410 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC4.96□□□□□ -1.61
CTLA4P16410 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC4.96□□□□□ -1.61
CTLA4P16410 ABCC13-202ENST00000463099 3842 ntBASIC4.96□□□□□ -1.61
CTLA4P16410 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
CTLA4P16410 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC4.96□□□□□ -1.62
CTLA4P16410 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
CTLA4P16410 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 142.6 ms